mRNA_Ecto-sp13_S_contig13068.2511.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13068.2511.1 vs. uniprot
Match: D8LIV0_ECTSI (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV0_ECTSI) HSP 1 Score: 461 bits (1186), Expect = 6.650e-160 Identity = 225/246 (91.46%), Postives = 236/246 (95.93%), Query Frame = 1
Query: 1 PVQFFDSLMSWLPVEGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDEDGGQASNSSSI--NDGGDKRLCVTREAAIRQSGWLFELPSTQPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGNSTSCNAAAVCVGMQRFQESYNACENPSCSSFYLTNLDDETMTCKSTGIMTILVWVFGIFFGVTEMAGHFLRAYYGGTGVGLRGHEHHQGWEFHTGRLIE 732
P +FFDSLMSWLPVEGDCPDPENGG+CSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDEDG Q SNS+S NDG D+RLCVTREA IRQSGW+FELPS QPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGN+TSCNAAAVCVGMQRFQESYNACE+PSCS +YLTNLD+ETMTCKSTGIMTILVWVFG+FFG+TEMAGHFLRAYYGGTGVGLRGHEHHQGWEFHTGRLIE
Sbjct: 228 PQEFFDSLMSWLPVEGDCPDPENGGICSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDEDGDQPSNSTSTSTNDGVDRRLCVTREATIRQSGWVFELPSMQPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESYNACEDPSCSYYYLTNLDNETMTCKSTGIMTILVWVFGMFFGITEMAGHFLRAYYGGTGVGLRGHEHHQGWEFHTGRLIE 473
BLAST of mRNA_Ecto-sp13_S_contig13068.2511.1 vs. uniprot
Match: A0A6H5KZM9_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM9_9PHAE) HSP 1 Score: 457 bits (1177), Expect = 2.140e-154 Identity = 226/251 (90.04%), Postives = 236/251 (94.02%), Query Frame = 1
Query: 1 PVQFFDSLMSWLPVEGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDEDGGQASNSSSINDGGDKRLCVTREAAIRQSGWLFELPSTQPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGNSTSCNAAAVCVGMQRFQESYNACENPSCSSFYLT-------NLDDETMTCKSTGIMTILVWVFGIFFGVTEMAGHFLRAYYGGTGVGLRGHEHHQGWEFHTGRLIE 732
P +FFDSLMSWLPVEG CPDPENGGMCSISAENAAMELPSLSFRLSQHGQELY+PLS LLL EDG Q SNSSS+NDG D+RLCVTREAAIRQSGW+FELPS QPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGN+TSCNAAAVCVGMQRF+ESYNACE+PSCSS+YLT NLDDETMTCKSTGIMTILVWVFGIFFG+TEMAGHFLRAYYGGTGVGLRGHEHHQGWEFHTGRLIE
Sbjct: 534 PHEFFDSLMSWLPVEGHCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYVPLSVLLL-EDGDQPSNSSSVNDGNDRRLCVTREAAIRQSGWIFELPSMQPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFRESYNACEDPSCSSYYLTALVAAGANLDDETMTCKSTGIMTILVWVFGIFFGITEMAGHFLRAYYGGTGVGLRGHEHHQGWEFHTGRLIE 783
BLAST of mRNA_Ecto-sp13_S_contig13068.2511.1 vs. uniprot
Match: A0A0G4J090_PLABS (Peptidase A1 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J090_PLABS) HSP 1 Score: 95.5 bits (236), Expect = 5.660e-19 Identity = 67/225 (29.78%), Postives = 105/225 (46.67%), Query Frame = 1
Query: 1 PVQFFDSLMSWLPVEGDCPDPENGGMCSISAENA-----AMELPSLSFRLSQHGQELYLPLSALLLDEDGGQASNSSSINDGGDKRLCVTREAAIRQSGWLFELPSTQPVVSLGTLPLRSLYAVVD-TEIGRVGLAQKGDVGDSALGNAGNSTSCNAAAVCVGMQRFQESYNACENPSCSSFYLTNLDDETMTCKSTGIMTILVWVFGIFFGVTEMAGHFLRAYY 657
P +FFD++M+W+P D P NG S+ + + LPSLSF ++ G +YLP+ LLL GG+ +R+C+ R+ S + P +S G L + +L+A D + RVGLA + + G + +C A A C+G Q + NAC++P CS++ + LD T C I V+ V E+ L+A+Y
Sbjct: 265 PGEFFDTVMAWIPSSCDAPVHVNGQYGSMMYQTCYVNETVVNLPSLSFTVTNGGDPIYLPIQNLLLPSSGGR------------RRICMFRDIDAFSSTAVQLRP-----ISFGALAMTALFASFDMSSAQRVGLANQ-----PGINGTGANDNCKAPAPCIGQQTYWAPLNACQDPDCSNYLVMGLDPATRQCTFDQAAAITVYAIVTALFVAEVG---LQAFY 464
BLAST of mRNA_Ecto-sp13_S_contig13068.2511.1 vs. uniprot
Match: A0A7S0HVL5_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HVL5_9CRYP) HSP 1 Score: 91.7 bits (226), Expect = 1.590e-17 Identity = 64/230 (27.83%), Postives = 100/230 (43.48%), Query Frame = 1
Query: 1 PVQFFDSLMSWLPV-----------------EGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDEDGGQASNSSSINDGGDKRLCV--TREAAIRQSGWLFELPSTQPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGNSTSCNAAAVCVGMQRFQESYNACENPSCSSFYLTNLDDETMTCKSTGIMTILVWVFGIFFGVTEMA 633
P + FD ++SW P C + +N +C + + +LP LSFR+S+ G LYLPLS+L++++ G R+C+ T A+ ++ + +L P +S GTL LR+L+ D + VG+ K S G C+ C G Q + N C +P C FY LD ET TC+ + + + F V E+A
Sbjct: 368 PQELFDMVLSWTPALHCVPELVPKFDFTDCANSACTESKNLTICYLGEGSGEEDLPVLSFRMSEEGPLLYLPLSSLMIND-----------RPSGKPRVCLNPTDSIAMYRTEQIKDLLYF-PKISFGTLALRNLFTSFDMQAMSVGMKNKIVFDPSTYSEIGK---CSVPVTCQGAQTYYAPMNTCLDPDCEQFYFHELDQETKTCRLNNAFLVSCILVLLSFSVAEVA 582
BLAST of mRNA_Ecto-sp13_S_contig13068.2511.1 vs. uniprot
Match: A0A7S3GZ76_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZ76_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.000e-16 Identity = 69/232 (29.74%), Postives = 105/232 (45.26%), Query Frame = 1
Query: 1 PVQFFDSLMSWLPVEGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQEL---YLPLSALLLD------EDGG---QASNSSSINDGGDKRLCVTREAAI-RQSGWLFELPSTQPVVSLGTLPLRSLYAVVDTEIGRVGLAQK-GDVGDSALGNAGNSTSCNAAAVCVGMQRFQESYNACENPSCSSFYLTNLDDETMTCKSTGIMTILVWVFGIFFGVTEMAGHFLRAY 654
P + +DS SW S N +P+ S+++S E+ YLPLS LL++ E G + +S ++ RLCV R + I + G E P +S GTL L+S+Y D RVG+A K + G A + T C A VC+G Q + +S N+C++P CS ++ T LD++T C + VF I E+ +F+ Y
Sbjct: 120 PAEIYDSFQSWFNTS--------------SVVNDITSMPAFSYQVSNSANEVTTAYLPLSDLLINATDIETESGAPIVRVRYPTSTDEVRTMRLCVLRGSNIAHRVGGQTEYYVPAPQISFGTLALQSIYFAADFNDVRVGVANKLSNTYIQGFGEA-SRTGCAAKTVCIGDQDYHQSTNSCQDPPCSHYFFTELDEDTKKCVFNQSNMVGGLVFIILIVCAEVVSYFVAQY 336
BLAST of mRNA_Ecto-sp13_S_contig13068.2511.1 vs. uniprot
Match: A0A7S1CM82_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM82_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.760e-14 Identity = 65/202 (32.18%), Postives = 92/202 (45.54%), Query Frame = 1
Query: 1 PVQFFDSLMSWLPVEGDCPDPENGG-----MCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDEDGGQASNSSSINDGGDKRLCVTREAAIRQSGWLFELPSTQPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGNST--------SCNAAAVCVGMQRFQESYNACENPSCSSFY-LTNLDDETMTC 564
P + FD+LM+W P D C + + ELP LSF+L++ GQ L++PLS+L++ DG +AS G + CV R AI+ S P PV G+L LRSLY V DT+ +V A+K V S L G + + C G Q + + N C P C + Y LD+ + C
Sbjct: 369 PAEAFDTLMTWAPALCDFAAAAAHSDTFVPPCYLPDDVDEDELPWLSFKLAEDGQRLFVPLSSLIVPGDGAEASPD------GRRYYCVLRGTAIQASVSSTSDPR-MPVAVGGSLLLRSLYVVFDTDSSKVAFARK--VAPSELATVGRNAKEVEFAGCATPTLGACRGAQVWHAARNVCVAPDCGNLYAFEELDEASQLC 561
BLAST of mRNA_Ecto-sp13_S_contig13068.2511.1 vs. uniprot
Match: L1J2B6_GUITC (Peptidase A1 domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J2B6_GUITC) HSP 1 Score: 81.6 bits (200), Expect = 4.210e-14 Identity = 61/230 (26.52%), Postives = 97/230 (42.17%), Query Frame = 1
Query: 1 PVQFFDSLMSWLPV-----------------EGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDEDGGQASNSSSINDGGDKRLCVTR--EAAIRQSGWLFELPSTQPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGNSTSCNAAAVCVGMQRFQESYNACENPSCSSFYLTNLDDETMTCKSTGIMTILVWVFGIFFGVTEMA 633
P + FD ++SW P C + +N +C + +LP LSFR+S+ G L+LPL++L++++ G R+C+ A+ ++ + +L P +S GTL LR+L+ D VG+ K + G C+ C G Q F N C +P C FY LD +T TC+ I V + F + E+A
Sbjct: 341 PQELFDMVVSWTPALNCGPELVPRFDFTDCANSACTESKNLTICYLREGMKEEDLPVLSFRMSEDGPLLFLPLASLMIND-----------RPSGKPRVCLNPADSIAMYRTEQIKDLLYF-PKISFGTLALRNLFTSFDMRAMSVGMKNKMTFDSTTYAEIGV---CSKPVTCRGAQTFYAPMNTCVDPDCEQFYFHELDQDTKTCRLNNSFLISCIVVLLSFTMAEVA 555
BLAST of mRNA_Ecto-sp13_S_contig13068.2511.1 vs. uniprot
Match: A0A7S3YA41_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA41_HETAK) HSP 1 Score: 57.4 bits (137), Expect = 1.920e-6 Identity = 43/135 (31.85%), Postives = 67/135 (49.63%), Query Frame = 1
Query: 1 PVQFFDSLMSWLP-VEGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDEDGGQASNSSSINDGGDKRLCVTREAAIRQS----GWLFELPSTQPVVSLGTLPLRSLYAVVDTEIGRVGLA 390
P +FF L+ WL VE P+ C +++ + + LP L+FRL++ G LYLPLS LLLD+ GQ +C+ + ++ + G P +S G+L ++SLY D + R+GLA
Sbjct: 77 PREFFSKLLVWLENVECVANAPDGIKRCYLNSTSDS--LPVLTFRLTEEGGTLYLPLSDLLLDD--GQ-------------EICLREDPSVLTTNLDVGSAETYVDPPPYISFGSLAVKSLYFAADFDAQRMGLA 194 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13068.2511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13068.2511.1 >prot_Ecto-sp13_S_contig13068.2511.1 ID=prot_Ecto-sp13_S_contig13068.2511.1|Name=mRNA_Ecto-sp13_S_contig13068.2511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp MSWLPVEGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSAback to top mRNA from alignment at Ecto-sp13_S_contig13068:403..4846+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13068.2511.1 ID=mRNA_Ecto-sp13_S_contig13068.2511.1|Name=mRNA_Ecto-sp13_S_contig13068.2511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4444bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13068:403..4846+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13068:403..4846+ >mRNA_Ecto-sp13_S_contig13068.2511.1 ID=mRNA_Ecto-sp13_S_contig13068.2511.1|Name=mRNA_Ecto-sp13_S_contig13068.2511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=708bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13068:403..4846+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |