prot_Ecto-sp13_S_contig13063.2509.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13063.2509.1
Unique Nameprot_Ecto-sp13_S_contig13063.2509.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length355
Homology
BLAST of mRNA_Ecto-sp13_S_contig13063.2509.1 vs. uniprot
Match: A0A6H5JFN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFN8_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 4.340e-60
Identity = 163/215 (75.81%), Postives = 163/215 (75.81%), Query Frame = 0
Query:   43 GSCAAPPRGPSASGGRHDINEAFLGGRGATRAGTGASSSSHSSGGVHLLGGLGGGASGSGSRACPGALSLGAGGSVDGGVCDPGAGGXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXR------REELSTESREPREDGLRRSARNVKDVQVRRSSRIKERDEKAAASRTTSGMGQAAAGGNERLAAAVSAPESSGPVTKRARRGGGVES 251
            GSC APPRGPSASGGRHDINEA LG RGATRAGTGASSSSHSSGGVH LGG GGGASGSGSRACPGA SLGAGGS  GGVC PGAGG         A     XXXXXXXXXXXXXXXXXXXX       REELSTESREPREDGLRRSARNVKDVQVRRSSRIKERDEKAAASRTTSGMGQ                   G   KRARRGGGVES
Sbjct:  153 GSCVAPPRGPSASGGRHDINEAILGRRGATRAGTGASSSSHSSGGVHRLGGFGGGASGSGSRACPGAQSLGAGGSAVGGVCHPGAGGAGSVAGVMGAGVVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXREELSTESREPREDGLRRSARNVKDVQVRRSSRIKERDEKAAASRTTSGMGQXXXXXXXXXXXXXXXXXXXGKQAKRARRGGGVES 367          
BLAST of mRNA_Ecto-sp13_S_contig13063.2509.1 vs. uniprot
Match: D8LKR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR7_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 7.950e-54
Identity = 260/362 (71.82%), Postives = 266/362 (73.48%), Query Frame = 0
Query:    1 MQTGPPASTAPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSCAAPPRGPSASGGRHDINEAFLGGRGATRAGTGASSSSHSSGGVHLLGGLGGGASGSGSRACPGALSLGAGGSVDGGVCDPGAGGXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXR-------REELSTESREPREDGLRRSARNVKDVQVRRSSRIKERDEKAAASRTTSGMGQAAAGGNERLAAAVSAPESSGPVTKRARRGGGVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAASGGGAGAPAV----GAAAGAKVKAETKGAAGGDEGGGTD 351
            MQTGPPAS AP       XXXXXXX                  SCA  PRGPSASG RHDINEA LG +GATRAGTGASSSS SSGGVH LGG GGGASGSGSRAC GA SL         VCD GA G         A XXXXXXXXXXXXXXXXXXXXXXXX        REELSTESREPREDGLRRSARNVKDVQVRRSSRIKERDEKAAA RTTSGMGQA           V+APESSG  TKRARRGGGVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R+ ASG GAGAPA          +KVKAETK A GG++  GTD
Sbjct:    1 MQTGPPASAAPX------XXXXXXXTGASSSNRQGSSSAMVSASCA--PRGPSASGSRHDINEAILGRKGATRAGTGASSSSRSSGGVHRLGGFGGGASGSGSRACLGAQSLXXXXXXXXXVCDLGARGAGSDAGVVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREELSTESREPREDGLRRSARNVKDVQVRRSSRIKERDEKAAALRTTSGMGQAXXXXXXXXXXXVAAPESSGKETKRARRGGGVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKVASGRGAGAPAAVXXXXXXXXSKVKAETKRAGGGNDEAGTD 354          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13063.2509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JFN8_9PHAE4.340e-6075.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKR7_ECTSI7.950e-5471.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13063contigEcto-sp13_S_contig13063:3290..4696 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13063.2509.1mRNA_Ecto-sp13_S_contig13063.2509.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13063 3290..4696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13063.2509.1 ID=prot_Ecto-sp13_S_contig13063.2509.1|Name=mRNA_Ecto-sp13_S_contig13063.2509.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=355bp
MQTGPPASTAPAPAAGAAGASSSNRQGSSSAMVSASSGSASAGSCAAPPR
GPSASGGRHDINEAFLGGRGATRAGTGASSSSHSSGGVHLLGGLGGGASG
SGSRACPGALSLGAGGSVDGGVCDPGAGGAGSGAGVEGAGGGGGTGQGQE
GGGGSGSGRSRTKRRREELSTESREPREDGLRRSARNVKDVQVRRSSRIK
ERDEKAAASRTTSGMGQAAAGGNERLAAAVSAPESSGPVTKRARRGGGVE
SGGRKRSAAAVAAAESSGPVTKRARRGGRVESGGRKRSAAAVAAAESSSP
VTKRARRGGRVEREAASGGGAGAPAVGAAAGAKVKAETKGAAGGDEGGGT
DQVL*
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