prot_Ecto-sp13_S_contig13053.2505.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13053.2505.1
Unique Nameprot_Ecto-sp13_S_contig13053.2505.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length171
Homology
BLAST of mRNA_Ecto-sp13_S_contig13053.2505.1 vs. uniprot
Match: A0A6H5JFR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR6_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 1.800e-60
Identity = 136/162 (83.95%), Postives = 140/162 (86.42%), Query Frame = 0
Query:    1 MLRSGARPVAVAPTETGLELVWETLTDDLKAVQAGKLSLVVNEEPAGIRIVRVAGPGQPQGKALAGEEEIVQSLLEGINTVAYPKSFVKRKAPKVSRAAAETAXXXXXXXXGPEASTPREEAVSSATTXXXXXXXXXXXXXXXXXXXXXPRKKGRGRRSGGQ 162
            MLRSGARPVAVAPTETGLELVWETLTDDLKAVQAGKLSLVVNEEPAGIRIVRVAGPGQPQGK L+GEEEIVQSLLEGINTVAYPKSFVKRKAPKVSRAAAE  XXXXXXXX           VS+AT XXXXXXXXXXXXXX       PR+KGRGRRSGG+
Sbjct:  342 MLRSGARPVAVAPTETGLELVWETLTDDLKAVQAGKLSLVVNEEPAGIRIVRVAGPGQPQGKTLSGEEEIVQSLLEGINTVAYPKSFVKRKAPKVSRAAAEAXXXXXXXXXXXXXXXXXXXXVSAATXXXXXXXXXXXXXXXEGVPAAAPRRKGRGRRSGGK 503          
BLAST of mRNA_Ecto-sp13_S_contig13053.2505.1 vs. uniprot
Match: D7FWZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWZ9_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 4.010e-58
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0
Query:    1 MLRSGARPVAVAPTETGLELVWETLTDDLKAVQAGKLSLVVNEEPAGIRIVRVAGPGQPQGKALAGEEEIVQSLLEGINTVAYPKSFVKRKAPKVSRAAAETA 103
            MLRSGARPVAVAPTE+GLELVWETLTDDLKAVQAGKLSLVV EEPAGIRIVRVAGPGQPQGKAL+GEEEIVQSLLEGINTVAYPKSFVKRKAPKVSRAAAE A
Sbjct:  144 MLRSGARPVAVAPTESGLELVWETLTDDLKAVQAGKLSLVVTEEPAGIRIVRVAGPGQPQGKALSGEEEIVQSLLEGINTVAYPKSFVKRKAPKVSRAAAEAA 246          
BLAST of mRNA_Ecto-sp13_S_contig13053.2505.1 vs. uniprot
Match: A0A7S3XU61_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU61_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 8.140e-16
Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 0
Query:    2 LRSGARPVAVAPT-ETGLELVWETL-TDDLKAVQAGKLSLVVNEEPAGIRIVRVAGPGQPQGKALAGEEEIVQSLLEGINTVAYPKSFVKRKAP 93
            +R+GARP +V P  E G  + WETL    ++ V  G+L + V  EPAG+ + R  G G P    L GEEEI+QSL+EG+NTVA+P+ +V + AP
Sbjct:  304 IRTGARPTSVQPLGELGAAVQWETLDARTMEVVYPGRLEIQV--EPAGLTVTRTDGKGGPLSSILPGEEEIIQSLIEGLNTVAFPRGYVMKNAP 395          
BLAST of mRNA_Ecto-sp13_S_contig13053.2505.1 vs. uniprot
Match: A0A7S2UTP4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTP4_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.470e-13
Identity = 38/99 (38.38%), Postives = 66/99 (66.67%), Query Frame = 0
Query:    1 MLRSGARPVAV--APTETGLELVWETLTDDLKAVQAGKLSLV--VNEEPAGI-RIVRVAGPGQPQGKALAGEEEIVQSLLEGINTVAYPKSFVKRKAPK 94
            M RSG RPV +  AP++    +VWE+L +DL+A++ G L ++  V ++ +G+ R+VR  G G  +   L GEEE++ + +EG+NT+A+ K F++++  K
Sbjct:  351 MTRSGERPVRMITAPSKDQSSIVWESLDEDLRAIRTGTLDVIIEVEDDKSGVLRVVRTDGSGNARTTPLKGEEEVLSAFIEGVNTMAFGKGFLRKQKAK 449          
BLAST of mRNA_Ecto-sp13_S_contig13053.2505.1 vs. uniprot
Match: A0A7S2GEE9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GEE9_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 9.550e-12
Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    3 RSGARPVAVAPTETGLELVWETLTDDLKAVQAGKLSLVVNEEPAGIRIVRVAGPGQPQGKALAGEEEIVQSLLEGINTVAYPKSFVKR 90
            R+GARPV V  T+TG  + WE +  + +    G+L + +++    +R+VR    G+P G +L GE+E++Q LLEGI T  Y K++  R
Sbjct:  301 RTGARPVVVRATDTGAAVRWENMNSNFEMDFVGQLQIEISDSD--LRLVRADASGRPLGTSLPGEDELLQRLLEGIETTVYAKNYATR 386          
BLAST of mRNA_Ecto-sp13_S_contig13053.2505.1 vs. uniprot
Match: A0A835YZQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZQ9_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.930e-10
Identity = 41/107 (38.32%), Postives = 56/107 (52.34%), Query Frame = 0
Query:    6 ARPVAVAPTETGLELVWETLTDDLKAVQAGKLS-------------------LVVNEEP--AGIRIVRVAGPGQPQGKALAGEEEIVQSLLEGINTVAYPKSFVKRK 91
            A P +      G E++WE  T +L+    G+L                    +++ +EP  AG+R+VR  G G PQ   L GE+EIVQSLLEGIN VAY + +V RK
Sbjct:  310 AAPASAYAPGGGAEVIWEAPTRNLEVEVTGRLQPKAAAAQQQALIASRRSTQVLLRDEPGSAGMRVVRCDGAGAPQIVPLVGEDEIVQSLLEGINAVAYARGYVTRK 416          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13053.2505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JFR6_9PHAE1.800e-6083.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWZ9_ECTSI4.010e-5896.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XU61_HETAK8.140e-1646.81Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UTP4_9STRA2.470e-1338.38Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2GEE9_9STRA9.550e-1238.64Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835YZQ9_9STRA3.930e-1038.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13053contigEcto-sp13_S_contig13053:2621..4502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13053.2505.1mRNA_Ecto-sp13_S_contig13053.2505.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13053 2621..4526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13053.2505.1 ID=prot_Ecto-sp13_S_contig13053.2505.1|Name=mRNA_Ecto-sp13_S_contig13053.2505.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=171bp
MLRSGARPVAVAPTETGLELVWETLTDDLKAVQAGKLSLVVNEEPAGIRI
VRVAGPGQPQGKALAGEEEIVQSLLEGINTVAYPKSFVKRKAPKVSRAAA
ETAMAAAASATGPEASTPREEAVSSATTRAPAAEAAAATAAAEGVPAAAP
RKKGRGRRSGGQAQFLLFFG*
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