mRNA_Ecto-sp13_S_contig1305.2503.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1305.2503.1
Unique NamemRNA_Ecto-sp13_S_contig1305.2503.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1305.2503.1 vs. uniprot
Match: D8LJ79_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ79_ECTSI)

HSP 1 Score: 555 bits (1430), Expect = 8.960e-197
Identity = 274/294 (93.20%), Postives = 281/294 (95.58%), Query Frame = 1
Query:  109 MRIFTKKAALAGAAAVFFWHHSQCLGYTSFVRPLHPRHCSAVTRAMPYRRSDRNHVLKLAVEGGPPRAVEESTPLSRARDVLFEPAFRSLLPPMAAAGALLGPNLDNYHSAFGVLAYKHPIELYVAGRLIVTTDWWVPPLFAIAGAGIGALYILLDAALETPQAQREPVWRDVLLSISLFSFQYYLSGLLTAVGCPYWVLVGSLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDLYVYNGADFFGVDSWIPIVYFCGGPAVGNLARTVYAKLLAAERKEGRNLT 990
            MRI  +KAALAGAAAV F HHS CLGYTSFVRPLHPRHCSA+ RAMPYRRSDRNHVLKLA  GGP RAV ESTPLSRARDVLFEPAFRSLLPPMAAAGALLGPNLDNYHSAFGVLAYKHPIEL VAG LI+TTDWWVPPLFA+AGAGIGALYILLDAALETPQAQREP+WRDVLLSISLFSFQYYLSGLLTAVGCP WVLVGSLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDLY+YNGADFFGVDSWIPIVYFCGGPAVGNLART+YAKLLAAERKEGRNLT
Sbjct:    1 MRISARKAALAGAAAVCFLHHSSCLGYTSFVRPLHPRHCSAIKRAMPYRRSDRNHVLKLAAGGGPSRAVGESTPLSRARDVLFEPAFRSLLPPMAAAGALLGPNLDNYHSAFGVLAYKHPIELNVAGHLILTTDWWVPPLFAVAGAGIGALYILLDAALETPQAQREPLWRDVLLSISLFSFQYYLSGLLTAVGCPNWVLVGSLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDLYMYNGADFFGVDSWIPIVYFCGGPAVGNLARTIYAKLLAAERKEGRNLT 294          
BLAST of mRNA_Ecto-sp13_S_contig1305.2503.1 vs. uniprot
Match: A0A7S2WRM2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRM2_9STRA)

HSP 1 Score: 203 bits (517), Expect = 3.100e-59
Identity = 106/191 (55.50%), Postives = 130/191 (68.06%), Query Frame = 1
Query:  397 AGALLGPNLDNYHSAFGVLAYKHPIELYVAGRLIVTTDWWVPPLFAIAGAGIGALYILLDAALETPQAQREPVWRDVLLSISLFSFQYYLSGLLTAVGCPYWVLVGSLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDLYVYNGADFFGVDSWIPIVYFCGGPAVGNLARTVYAKLLAAER 969
            +GALLGPNLD+YH +FGVL Y +P+ L V G +++ T  +VPPLF +AG  IG LY+ LD AL TP A+R P    VL  IS FS QYYLSGLL   GCP   L   LA      + +FD T AG+ V+ ATA  GPLIEI LVN   LY Y  ADFFGV SWIP VY CGGPAVGNL+R +Y+++L+ ++
Sbjct:   66 SGALLGPNLDHYHGSFGVLEYVYPLTLSVQGTVLLRTSAFVPPLFGLAGLIIGGLYLFLDPALGTPVARRTPQVPKVLYGISFFSMQYYLSGLLAHAGCPLVALHAFLAATMVACWYIFDKTLAGVIVAAATAVGGPLIEIGLVNGLHLYTYTDADFFGVASWIPWVYGCGGPAVGNLSR-LYSRVLSQDK 255          
BLAST of mRNA_Ecto-sp13_S_contig1305.2503.1 vs. uniprot
Match: A0A7S0DNN3_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DNN3_9EUKA)

HSP 1 Score: 188 bits (477), Expect = 4.920e-53
Identity = 101/184 (54.89%), Postives = 119/184 (64.67%), Query Frame = 1
Query:  394 AAGALLGPNLDNYHSAFGVLAYKHPIELYVAGRLIVTTDWWVPPLFAIAGAGIGALYILLDAALETPQAQREPVWRDVLLSISLFSFQYYLSGLLTA---VGCPYWVLVGSLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDLYVYNGADFFGVDSWIPIVYFCGGPAVGNLAR 936
            A+GALLGPNLDNYH  FGVL Y HPI   V   +++ T  +VPP F +AG  IG+LY+ LD  L T Q+ R P    +L  I  FS QYYLSGLL     +  PY  L+  LA     +F VFD T++G  V+LAT   GPLIE+FLVN  DLY Y  ADFFG+DSWIP VY  G PAVGNLAR
Sbjct:   87 ASGALLGPNLDNYHGLFGVLTYAHPIVFSVKDTVLLQTSSFVPPTFGLAGFLIGSLYLTLDQFLNTTQSSRNPSGLTILSGIGAFSAQYYLSGLLAGGFHIPSPYLHLI--LAATMICIFLVFDRTKSGALVALATGLGGPLIELFLVNQLDLYSYADADFFGIDSWIPWVYAAGAPAVGNLAR 268          
BLAST of mRNA_Ecto-sp13_S_contig1305.2503.1 vs. uniprot
Match: A0A7S3ZBR4_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZBR4_9EUKA)

HSP 1 Score: 168 bits (426), Expect = 2.250e-45
Identity = 95/191 (49.74%), Postives = 114/191 (59.69%), Query Frame = 1
Query:  388 MAAAGALLGPNLDNYHSAFGVLAY-KHPIELYVAGRLIVTTDWWVPPLFAIAGAGIGALYILLDAALETPQAQREPVWRDVLLSISLFSFQYYLSGLLTAVGCPYWVLVGSLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDLYVYNGADFFGVDSWIPIVYFCGGPAVGNLARTVYAKLL 957
            M  AGALLGP LDNYH  F  L Y K   EL + G  I+ + +WVP LF +AG  I  LY L D  L+T   +R+P    +L  IS F+ QYYLSG L  +G    V+  +LAV+A   F  FD + AG   SLATA  GP IEI L+N    Y Y  AD +GVDSWIP VYF GGPAVGNL R +   +L
Sbjct:   95 MFIAGALLGPFLDNYHGQFDTLRYSKGAFELQMQGMSILKSAYWVPFLFGVAGVLISQLYDLFDKVLDTEMTKRKPTPWKILYGISAFAAQYYLSGYLDKMGIDTPVIHLTLAVLALVGFRYFDGSIAGFVTSLATAVGGPAIEIALINLAQAYSYTNADIWGVDSWIPWVYFLGGPAVGNLGRGIANSVL 285          
BLAST of mRNA_Ecto-sp13_S_contig1305.2503.1 vs. uniprot
Match: A0A7S4MFY6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MFY6_9STRA)

HSP 1 Score: 165 bits (418), Expect = 4.960e-43
Identity = 103/220 (46.82%), Postives = 131/220 (59.55%), Query Frame = 1
Query:  322 STPLSRARDVLFEPAFRSLL--PPMAAAGALLGPNLDNYHSAFGVLAYKHPIELYVAGRL---IVTTDWWVPPLFAIAGAGIGALYILLDAALETPQAQREPVWRDVLLSISLFSFQYYLSGLLTAVGCPYWVLVGSLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDL---YVYNGADFFGV-DSWIPIVYFCGGPAVGNLARTVYAKL 954
            S  LSRA   +     RS+     MA  GA LGP LD+YHS+FGVL Y  PI + + G      + T WWVPPLF +AG  IG LYILLD+ LET   +  P   ++L  IS+F+ QY+LSG++ A G    V++G ++V+A   F VFD+T AGL  S ATA  GPLIE+ L++       Y Y  A   G    WI  VYF GGPAVGNLAR ++ KL
Sbjct:   99 SDTLSRAASAVTSSPGRSISFSALMALCGAALGPFLDSYHSSFGVLQYDAPIYVPLWGTAENPALITSWWVPPLFGLAGFIIGWLYILLDSGLETDGRRMAPSPPEILTGISVFTLQYWLSGVMNASGVGREVILGVMSVVAALGFVVFDSTTAGLLTSAATAVGGPLIEVGLISTLQGHGGYHYTDAGETGFFPLWIVPVYFLGGPAVGNLARGIWNKL 318          
BLAST of mRNA_Ecto-sp13_S_contig1305.2503.1 vs. uniprot
Match: W7UAA8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UAA8_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.980e-40
Identity = 82/190 (43.16%), Postives = 115/190 (60.53%), Query Frame = 1
Query:  388 MAAAGALLGPNLDNYHSAFGVLAYKHPIELYVAGRLIVTTDWWVPPLFAIAGAGIGALYILLDAALETPQAQREPVWRDVLLSISLFSFQYYLSGLLTAVGCPYWVLVG-SLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDLYVYNGADFFGVDSWIPIVYFCGGPAVGNLARTVYAKL 954
            M    ++LGP LD++H   GVL Y  P+ + +    ++ T  WVP LF +AG  +  L +++D A +TP  + +P   DVL  ISLFSFQYY+SG+L  V     V++  SL  +A   +  FD T AGL V + T+  GP++E+ L   T+LY+Y+  DF+ V SWIP VY CGGPAV NLAR  +  L
Sbjct:  106 MGIESSILGPFLDDFHGRTGVLHYNDPLSVDIGQYHVLGTAAWVPLLFGLAGVIMSFLTVVMDEAFQTPCKKLQPAPPDVLKGISLFSFQYYISGVLAGVFLVNPVILNVSLLGLAVVCYLRFDRTWAGLTVGVLTSIFGPILELLLTTYTELYIYSSPDFYSVPSWIPWVYLCGGPAVCNLARAQWQAL 295          
BLAST of mRNA_Ecto-sp13_S_contig1305.2503.1 vs. uniprot
Match: L1JGI9_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JGI9_GUITC)

HSP 1 Score: 151 bits (382), Expect = 8.450e-40
Identity = 84/209 (40.19%), Postives = 114/209 (54.55%), Query Frame = 1
Query:  337 RARDVLFEPAFRSLLPPMAAAGALLGPNLDNYHSAFGVLAYKHPIELYVAGRLIVTTDWWVPPLFAIAGAGIGALYILLDAALETPQAQREPVWRDVLLSISLFSFQYYLSGLLTAVGCPYWVLVGSLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNA------TDLYVYNGADFFGVDSWIPIVYFCGGPAVGNLARTVY 945
            +++D      +R  L  MA  GA+LGP LD YHSAFGVL Y +P ++ +AG  +  TD+WVP +FA+A   +G  Y +LD   +  +    P     L  +S F FQYY SGLL   G     L  SLA+ A   + +FD TR G  +S+ T   GPL+E+FL+          LY Y+  D  G+  WI  VY CG PAVG L+R  +
Sbjct:    4 KSKDFQTVSVWRDHLLAMATYGAMLGPQLDGYHSAFGVLKYTNPKQISLAGHFLFETDYWVPAMFALASVILGISYPILDMIFKEEELS-VPTPPKSLACVSFFCFQYYCSGLLFQQGVEDVSLHLSLAISAVACWWIFDRTRTGAIMSIVTGLCGPLVEVFLLQVWPAWTGQTLYAYSAPDMLGIPLWIAWVYGCGAPAVGGLSRLTW 211          
BLAST of mRNA_Ecto-sp13_S_contig1305.2503.1 vs. uniprot
Match: A0A7S1DHL9_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DHL9_HEMAN)

HSP 1 Score: 151 bits (381), Expect = 1.660e-39
Identity = 90/227 (39.65%), Postives = 120/227 (52.86%), Query Frame = 1
Query:  301 PPRAVEESTPLSRARDVLFEPAFRSL--------LPPMAAAGALLGPNLDNYHSAFGVLAYKHPIELYVAGRLIVTTDWWVPPLFAIAGAGIGALYILLDAALETPQAQREPVWRDVLLSISLFSFQYYLSGLLTAVGCPYWVLVGSLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFL------VNATDLYVYNGADFFG-VDSWIPIVYFCGGPAVGNLAR 936
            PP    ++  L R+     +PA   +        L  MA  GA LGP LD YHSAFGVL Y +PI + + G   + TDWWVPP+F++A   +   Y +LD+      A+R P    +L  I+ F FQY+ SGLL + G     +  SLAV A     +FD T  GL +++ T   GPL+E+ L      V  + LY Y+  DF G +  WI  VY CG PAVGNL R
Sbjct:    6 PPPPTRQAAGLHRSLCAQQQPAVEGIPSGPWGTYLAAMAGCGAALGPCLDGYHSAFGVLKYTNPIPIGLGGVKFLETDWWVPPMFSLAAVILAVSYPVLDSLFGVEVAKRSPSGPWILSCIAYFCFQYWSSGLLFSQGASLPTINLSLAVTAVACVALFDRTPTGLVMAIVTGVAGPLVELGLLLGWPEVTGSKLYSYSQPDFAGAIPLWIAWVYACGAPAVGNLGR 232          
BLAST of mRNA_Ecto-sp13_S_contig1305.2503.1 vs. uniprot
Match: A0A812QHN9_9DINO (INSIG2 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812QHN9_9DINO)

HSP 1 Score: 151 bits (382), Expect = 2.850e-39
Identity = 90/199 (45.23%), Postives = 118/199 (59.30%), Query Frame = 1
Query:  388 MAAAGALLGPNLDNY-HSAFGVLAYKHP--IELYVAGRLIVTTDWWVPPLFAIAGAGIGALYILLDAALETPQAQREPVWRDVLLSISLFSFQYYLSGLLTA----VGCPYWVLVGS-LAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNAT--DLYVYNGADFFGVDSWIPIVYFCGGPAVGNLARTVYAKL 954
            + A+ A+LGP LD   H  FGVLAY  P  + + +    + +T  WVPPLFA AG  I +LY L+D AL     QR P     L ++  F+  Y+ SG +++     G     L+   LA+ A   + VFD T  GL VS+ TA  G LIE+FL+NA   DLY Y+ ADF+GVDSWIP VYFCG PAVGNL+R +  +L
Sbjct:   66 LTASSAVLGPALDGTAHGNFGVLAYHFPPPVPVMLGSYKLFSTAIWVPPLFAFAGLLISSLYWLIDNALAVKAEQRSPSLLQTLAAVMCFAANYWASGFMSSNDLGTGKTVQRLISCVLALWAISAWRVFDGTTTGLVVSVMTAVGGTLIEVFLINAPWWDLYAYSKADFWGVDSWIPWVYFCGAPAVGNLSRLIRNRL 264          
BLAST of mRNA_Ecto-sp13_S_contig1305.2503.1 vs. uniprot
Match: A0A1E7F674_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F674_9STRA)

HSP 1 Score: 149 bits (376), Expect = 5.580e-38
Identity = 109/285 (38.25%), Postives = 141/285 (49.47%), Query Frame = 1
Query:  388 MAAAGALLGPNLDNYHSAFGVLAYKHPIELYVAGRLI---VTTDWWVPPLFAIAGAGIGALYILLDAAL-----------ETPQAQREPVWRDVLLSISLFSFQYYLSGLLTAVGC-PYWVLVGSLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDLYVYNGA---------DFFGVDSWIPIVYFCGGPAVGNLARTVYAKLLAAERKEGRNLT*LDLKPT*IRNRVH*R-CHGTTRLGLMRCESGQAACFPSGNTDKCSSCMASSVFV*RSMF 1167
            M+  GA LGP LD+YHSAFGVL Y  PI+  + G      +TT WWVP LF +AG  IG LYILLDA L              + QR P    +   IS F+FQY+LSG+L          ++  ++V A   F V D + +GL VSLAT   GPLIE  L+ AT+  + NG           FF +  WI  VYF GGPA GNLAR  +  L  ++ KE           T + ++     C GT R+    C+         G T KC+SC +    + RS F
Sbjct:    1 MSICGAGLGPFLDSYHSAFGVLKYNEPIQFVLWGSEAYPGLTTAWWVPELFGLAGFLIGWLYILLDAVLLKESSSDEGDVVEQEQQRLPSPPKIFAGISFFTFQYWLSGILVQNSLLDRTGILNLMSVFAAIGFLVLDGSMSGLIVSLATCLGGPLIEAGLITATNNGILNGGYHYTDLGETGFFPL--WIIPVYFLGGPANGNLARGFWNAL--SDNKEEXXXXXXSKAGTSVSDKKSCSACQGTRRVACPNCDGVGTYVATGGRTVKCTSCSSRGYVMCRSCF 281          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1305.2503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ79_ECTSI8.960e-19793.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2WRM2_9STRA3.100e-5955.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0DNN3_9EUKA4.920e-5354.89Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S3ZBR4_9EUKA2.250e-4549.74Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A7S4MFY6_9STRA4.960e-4346.82Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
W7UAA8_9STRA1.980e-4043.16Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
L1JGI9_GUITC8.450e-4040.19Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S1DHL9_HEMAN1.660e-3939.65Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A812QHN9_9DINO2.850e-3945.23INSIG2 protein n=1 Tax=Symbiodinium natans TaxID=8... [more]
A0A1E7F674_9STRA5.580e-3838.25Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1305contigEcto-sp13_S_contig1305:4443..8817 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score557.0
Seed ortholog evalue5.3e-156
Seed eggNOG ortholog2880.D8LJ79
Preferred nameINSIG1
Model size1317
Hectar predicted targeting categorysignal peptide
GOsGO:0001101,GO:0001501,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006355,GO:0006357,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006694,GO:0006695,GO:0006950,GO:0006984,GO:0006991,GO:0007154,GO:0007165,GO:0007275,GO:0007423,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008283,GO:0008610,GO:0009058,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009887,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010628,GO:0010639,GO:0010646,GO:0010648,GO:0010894,GO:0012505,GO:0014070,GO:0016020,GO:0016021,GO:0016125,GO:0016126,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019222,GO:0023051,GO:0023052,GO:0023057,GO:0030176,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031333,GO:0031984,GO:0032355,GO:0032386,GO:0032387,GO:0032501,GO:0032502,GO:0032507,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032933,GO:0032937,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0033554,GO:0033993,GO:0034613,GO:0035437,GO:0036314,GO:0036315,GO:0036316,GO:0042175,GO:0042221,GO:0042304,GO:0042471,GO:0042472,GO:0042474,GO:0042592,GO:0042632,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043434,GO:0043583,GO:0044087,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045185,GO:0045595,GO:0045596,GO:0045598,GO:0045599,GO:0045717,GO:0045833,GO:0045893,GO:0045922,GO:0045935,GO:0045939,GO:0045944,GO:0046165,GO:0046486,GO:0046890,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048568,GO:0048583,GO:0048585,GO:0048598,GO:0048705,GO:0048731,GO:0048839,GO:0048856,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050810,GO:0050896,GO:0051049,GO:0051051,GO:0051055,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051179,GO:0051223,GO:0051224,GO:0051235,GO:0051252,GO:0051254,GO:0051641,GO:0051651,GO:0051716,GO:0055088,GO:0055092,GO:0060021,GO:0060255,GO:0060341,GO:0060348,GO:0060349,GO:0060363,GO:0060627,GO:0060628,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0070201,GO:0070542,GO:0070727,GO:0070861,GO:0070862,GO:0070887,GO:0070972,GO:0071310,GO:0071375,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071501,GO:0071704,GO:0072595,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090317,GO:0090596,GO:0097094,GO:0098796,GO:0098827,GO:1901301,GO:1901303,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902652,GO:1902653,GO:1902680,GO:1903506,GO:1903508,GO:1903827,GO:1903828,GO:1904888,GO:1904950,GO:2000112,GO:2000638,GO:2000639,GO:2001141
Exons6
EggNOG free text desc.SREBP-SCAP complex retention in endoplasmic reticulum
EggNOG OGsKOG4363@1,KOG4363@2759
Ec32 ortholog descriptionInsulin-induced protein family
Ec32 orthologEc-02_005080.1
Cds size885
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1305.2503.1prot_Ecto-sp13_S_contig1305.2503.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1305 4551..8493 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462699.2550395-UTR-Ecto-sp13_S_contig1305:4442..45501681462699.2550395-UTR-Ecto-sp13_S_contig1305:4442..4550Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1305 4443..4550 +
1681462699.3319848-UTR-Ecto-sp13_S_contig1305:8493..88171681462699.3319848-UTR-Ecto-sp13_S_contig1305:8493..8817Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1305 8494..8817 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462699.2730455-CDS-Ecto-sp13_S_contig1305:4550..49571681462699.2730455-CDS-Ecto-sp13_S_contig1305:4550..4957Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1305 4551..4957 +
1681462699.281763-CDS-Ecto-sp13_S_contig1305:5477..55411681462699.281763-CDS-Ecto-sp13_S_contig1305:5477..5541Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1305 5478..5541 +
1681462699.2900336-CDS-Ecto-sp13_S_contig1305:6266..63441681462699.2900336-CDS-Ecto-sp13_S_contig1305:6266..6344Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1305 6267..6344 +
1681462699.2997355-CDS-Ecto-sp13_S_contig1305:6959..71181681462699.2997355-CDS-Ecto-sp13_S_contig1305:6959..7118Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1305 6960..7118 +
1681462699.3094268-CDS-Ecto-sp13_S_contig1305:7751..78261681462699.3094268-CDS-Ecto-sp13_S_contig1305:7751..7826Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1305 7752..7826 +
1681462699.318432-CDS-Ecto-sp13_S_contig1305:8391..84931681462699.318432-CDS-Ecto-sp13_S_contig1305:8391..8493Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1305 8392..8493 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1305.2503.1

>prot_Ecto-sp13_S_contig1305.2503.1 ID=prot_Ecto-sp13_S_contig1305.2503.1|Name=mRNA_Ecto-sp13_S_contig1305.2503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=295bp
MRIFTKKAALAGAAAVFFWHHSQCLGYTSFVRPLHPRHCSAVTRAMPYRR
SDRNHVLKLAVEGGPPRAVEESTPLSRARDVLFEPAFRSLLPPMAAAGAL
LGPNLDNYHSAFGVLAYKHPIELYVAGRLIVTTDWWVPPLFAIAGAGIGA
LYILLDAALETPQAQREPVWRDVLLSISLFSFQYYLSGLLTAVGCPYWVL
VGSLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDLYVYNG
ADFFGVDSWIPIVYFCGGPAVGNLARTVYAKLLAAERKEGRNLT*
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mRNA from alignment at Ecto-sp13_S_contig1305:4443..8817+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1305.2503.1 ID=mRNA_Ecto-sp13_S_contig1305.2503.1|Name=mRNA_Ecto-sp13_S_contig1305.2503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4375bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1305:4443..8817+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCAGCGTTGCAGCCCCCACGATTCCCACTCTATAGGGGGGTGTCTACT ACTGTTGCCATTCAGAGCTCCCTGTCCTTCTGTGTGGGGTGACTCAGGAT ATCCCGAAATGCGCATTTTCACCAAAAAGGCAGCACTTGCAGGCGCAGCG GCCGTCTTCTTCTGGCATCACTCACAATGTCTGGGGTACACATCATTCGT GCGGCCGTTGCACCCCCGCCATTGTAGCGCAGTTACGAGGGCAATGCCCT ACCGACGCAGCGACCGAAATCATGTGCTGAAGCTTGCTGTCGAAGGAGGC CCGCCCCGTGCTGTCGAAGAGTCGACTCCTTTGTCTCGGGCGCGAGACGT GTTGTTTGAGCCGGCCTTTCGAAGTTTACTCCCGCCAATGGCCGCGGCAG GCGCGCTGCTCGGCCCCAACCTCGACAACTACCACAGCGCCTTCGGGGTG TTGGCGTACAAACACCCCATCGAGCTGTACGTCGCTGGACGCTTGATCGT TACTACGGACTGGTGGTGAGAGACGTAGTTTTTGACCAGCATCACAACGT GCACAGTGGATGCATCTCAGATGCGCTGCTTTGTATTGGCATCTTTGGTG CTGGTATCTTGGGGTGCGCTCTGCAAGGGGGTTAGACATTACTTCGAAGT ATGTTGCCAACGGAGACATGTATGACAGGTCAGGGTGCTGTGACCTTACT CCAGCTTGAACATGAACATGAGCCTATACCCACTGCTCCCGAGTACGTGC ACGAGCTGGGGACTGCCATTCATCGCTTTGGCAGGTATCCAATGATGTGG TCGACGAAAATCCTTACCCTGAAAAAAATTGGTTCACAGCTGTTCGTGTG CACGCTTTGTGTGGGCGTTCTACTGCATGTTGCCGTGCGTTCCATGGCAG AAAGACAAACCCGGCTGAGCAGTTACCACCACCGTCTAGCCGTATACTGG GTTCGGCCTTGCTGTGCTTTGCAACCGCGGCCCCGTTAGTCTCGTCATCT TCGTTCTCCGCTGCCGTGCTGCTGTTTCAACGTAGGGTGCCGCCTCTGTT TGCTATTGCTGGAGCTGGGATCGGGGCGCTCTATATACTTTTGGACGCGG TAAGCGCGACAATCACGCGTGTCTTTCCCTTGCAACCCCCCGAAGGACGT TGAGCCATCTTCGCGCTCTCACGGCCACCTTCAGTTCGGATTAGGATGTT TCACTCTTCCAAAATGCCCACGCAACATCCATCTCCATGGCGCCCCTCCT TTTGCCAGTTTTCAGTTCGATCTCCAACTCCAATTCCAAAGCTGTTCTAT TGACCCCGAAATTTGAGCGGAGTAGATCCTAGCAAAACTTCCCAGACTTC TTCGAAGCGGCTTCGAGCCTGTAAACATGTTGTTTGTTGTTGTTGTTGTT GCTGTTGTTGTTGTTGTTGGTGGTGGTGGTCTTTGACTGTCGTTTTGTTT CAAGAAACTAGGAATTGAGGCACCACGCGCGTTCAGTCTCTTTTAGGCAC ACCCGATCAGAGGATTCCATTCCCTCAAGCTTAAGCAAGCGTAGCAAAGA CCACCTGACACACAGAGCGATTTTTTTTTACTTGCTGCAGGCAGCGTGTC AGCTCTTCTTTGCTGTCTGTTCTTGTGGCCAATATAATCAAATTTTTGCT CAAGTACATACATATTCATACACAGTTATGAAGCTTCCACTGCAGTGTTC GCTTGTTGGATGTTTTGCTTGTTCAGTTCGGTCGGTGTGCTCTATGTGTG TGACTGTTCGCGCACTCGCCTGTCGCTTGCGTGTGTTCTCTCCATTGCTA TTTCTGTCCATGCCTCTCTCACAGGCCTTGGAGACTCCGCAGGCGCAGCG GGAGCCGGTGTGGCGAGACGTTCTCCTGTCGATATCTTTGTTCAGCTTCC AAGTAAGGCAGCAAGACACGTGTCAACAACGACACGTCTCTTTCTACATA ACAACGACATCTCTTTTTAATGTTGGCGCAGAGGCAGGTTTTTACCCAGC AAGGTGTTCACGTAATTCTGCTCGTGAGCGCTGAGCAATACCTACGGTAC GGACCGCCGATATACGTTTCACGGACATGACCGTGTTTCTTGTCGGCCTG TTTCGCGCTAAAGTTGGGCAGTGCATACGTTTACTCACGCCATGTGCAGA AACAGGTTTGAATTCAACCCCCTGCTAAAAGGGGTCTGAGGGGGGCGGGT ACTAGTTGGTGGCACATGCCTACAGCTGTACCCTCGGACTCAATGGCAGC TAACTTGCACTTGGTTTCGTCAACAAATCACTTGACCACGCAATTCGGGG CGATATCCCTGCTTCCAAACGGGCCAACAATATTTGCGACCGGTTGGGTG ATATTTGTTGGCATCTTCGACAATGCCTCGGAGATGTCTCGGAGAAGAAA CGATTGGTCAATGCTGCGACCTTGCTTATCTGGGCCTGAATTCAGGCTGA AAGGCATCAAAACCGCTGTCCCTCTCTCCCCTATGGCGCATTTTCACACG TCCCACTCCCCGCCCAGTACTACCTGAGCGGACTGTTAACAGCCGTGGGG TGTCCGTACTGGGTGTTGGTGGGGTCGTTGGCGGTCATAGCCGAGCGCGT TTTTGATGTCTTCGACGCCACACGAGCGGGGCTGTGGGTTTCCCTGGCTA CGGCGACGCTGGGTCCGTTAATCGAGGTTCGTGTCGCTGAACCAAACGTG GCTCGATGTTTGTTTCACAGGGAAAAATTATGGTGCTACCAACACGGAAG TTGCTAAGTTGGTGCAACCATTGGCAGGTGACGATCTGGCGGTCTACAGT GTACTTCCACGTCATGTAGCGTTGGGGAAGCTACTTGTGTACTTCGAGTC TGTCGGCGATAACTTTGCGCTTGGCAGGCAGGCGGCCATTTTGTTCGACT TTTCGCTCTCTCAAGGGTACGTACGCCGGTCGGCCTTGGCTACAGTATCC TAAAGGGAAATTGTCCACCCTGTCATTTTCAGCTTGTTCCGAAAATACAC CGGCCAATTCCATGATCGTGTCTATACTGTATGTGAAGGTAGTATTCTTG TACCACAACGATAATACCACAAACAACTATACTTTACATGACAACGACTC CGTCTCTTCCACACATATGCACGAAGAGTCTGTGATACATTAGTAAATAC GTCTACAGTACCAATGCTTCCTCCAAGATGCAGGTTCTTGCGTAATGGGT ATTTTTGTCTCTCTCGCCTCGTCACAACGGACGAGATGCACTAGTGCTCT CTCACCCCCCTCGCCCCCCCCGTCCCACACACATACACACTTCCCCATCC TTATAATAGATTTTCTTGGTGAACGCAACGGATCTGTACGTGTACAACGG AGCCGACTTTTTCGGGGTGGACAGCTGGATTCCGGTGAGAGAAAAGAGAG GGAGATCGGGATTGAATCGATTCACGCGCCGCCGTGATTAAACGATCTTG ATTACGTTTACACGGTAGGAGAGCATCAAGGTCGATCAACCTGGTATTTA GGACGACAACCAGGAACCTGGTATTGAGGACAACAACCAGGCGACGAATG ATCAGTTGAAGCGGTGGTGATCATGGTAGGGTGCGCCTGTTCGAACCCAG ATGGCGGTCGTGATGCTGGCTTGTGGACCGTTGTCGCAATCGTGACGATC AGCCTTGTTGGTGGTTGTGAAGGCAACGACTCGTGTGTCCGGGTGGACAA TCAGTGAAAGGGCGCTCTCGACAAAACGTCCACCGACACGACGGGTAGTT TCAAGCCGTTGTTCGCCGGTGATGTCTCCCTTGGCACCTCTCTGAGTCAT GCGACCTGTCATGTTACTGTTGTTGTTGCATCACAACATGCCGCAAAATT CCATCCCCGCCACCAGCCGAAAAAGCTCTTGTTTGCCTTTGTTTTGTGCG ACGCGCCGTGTTGCTGTGATTTTTGCTAATGGGGGCTCCGTCGATTCAGA TTGTCTACTTTTGCGGGGGTCCCGCCGTGGGAAACTTGGCCAGGACGGTA TACGCAAAACTCCTCGCGGCGGAAAGAAAGGAGGGGCGCAACCTGACGTA GCTTGATCTCAAACCGACATGAATAAGAAACCGCGTTCATTGACGTTGTC ACGGCACCACAAGGCTGGGCCTTATGCGTTGTGAAAGCGGTCAGGCGGCG TGTTTTCCATCCGGCAACACAGACAAATGTTCTTCTTGCATGGCCAGTTC TGTGTTCGTGTGACGCTCCATGTTCCTCCTTATAAAGAGCCCGTTCTGCA CGCGCTACAGTTGTGTCCCAGAGAGAGTGCTTCGGTGGCCGGAATCAAGC CCTTTTCTGGCCCGCCCTCCTCGTTGCTCGAAACGTCACGATTTCGTCTT TGGTTGGCGAAGAGGAACAAAGAAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1305:4443..8817+

>mRNA_Ecto-sp13_S_contig1305.2503.1 ID=mRNA_Ecto-sp13_S_contig1305.2503.1|Name=mRNA_Ecto-sp13_S_contig1305.2503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=885bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1305:4443..8817+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCATTTTCACCAAAAAGGCAGCACTTGCAGGCGCAGCGGCCGTCTT
CTTCTGGCATCACTCACAATGTCTGGGGTACACATCATTCGTGCGGCCGT
TGCACCCCCGCCATTGTAGCGCAGTTACGAGGGCAATGCCCTACCGACGC
AGCGACCGAAATCATGTGCTGAAGCTTGCTGTCGAAGGAGGCCCGCCCCG
TGCTGTCGAAGAGTCGACTCCTTTGTCTCGGGCGCGAGACGTGTTGTTTG
AGCCGGCCTTTCGAAGTTTACTCCCGCCAATGGCCGCGGCAGGCGCGCTG
CTCGGCCCCAACCTCGACAACTACCACAGCGCCTTCGGGGTGTTGGCGTA
CAAACACCCCATCGAGCTGTACGTCGCTGGACGCTTGATCGTTACTACGG
ACTGGTGGGTGCCGCCTCTGTTTGCTATTGCTGGAGCTGGGATCGGGGCG
CTCTATATACTTTTGGACGCGGCCTTGGAGACTCCGCAGGCGCAGCGGGA
GCCGGTGTGGCGAGACGTTCTCCTGTCGATATCTTTGTTCAGCTTCCAAT
ACTACCTGAGCGGACTGTTAACAGCCGTGGGGTGTCCGTACTGGGTGTTG
GTGGGGTCGTTGGCGGTCATAGCCGAGCGCGTTTTTGATGTCTTCGACGC
CACACGAGCGGGGCTGTGGGTTTCCCTGGCTACGGCGACGCTGGGTCCGT
TAATCGAGATTTTCTTGGTGAACGCAACGGATCTGTACGTGTACAACGGA
GCCGACTTTTTCGGGGTGGACAGCTGGATTCCGATTGTCTACTTTTGCGG
GGGTCCCGCCGTGGGAAACTTGGCCAGGACGGTATACGCAAAACTCCTCG
CGGCGGAAAGAAAGGAGGGGCGCAACCTGACGTAG
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