prot_Ecto-sp13_S_contig13048.2501.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13048.2501.1
Unique Nameprot_Ecto-sp13_S_contig13048.2501.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length162
Homology
BLAST of mRNA_Ecto-sp13_S_contig13048.2501.1 vs. uniprot
Match: D8LK32_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK32_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 1.390e-89
Identity = 133/158 (84.18%), Postives = 140/158 (88.61%), Query Frame = 0
Query:    1 MGDHGIAAQHLRQVVESLKRTGQGSNTSQPSMLEETTLLKQCPTTLFLYLMRFEHVRSGGRFVERKLSHHVDVPKSIDMAPYTRPPASSAGAPQPERYDLTGVVHHEGKTTKGGHYTAFVRLAGEEWRRYNDSKVTKVGYEDVLTENALILTYTRRSG 158
            MGDHG AAQHLRQVVESLKRT Q  +  + S LEE T LKQCP T+  YL+RFEHVRSGG FVERKLSHHVDVPKSID+APYTRPPASSAG PQ ERYDLTGVVHHEG+TTK GHYTAFV LAGEEWRRY+DSKVTKVGYEDVLTENALILTYTRRSG
Sbjct:   17 MGDHGRAAQHLRQVVESLKRTAQVGDVGR-STLEEKTSLKQCPPTILFYLIRFEHVRSGGTFVERKLSHHVDVPKSIDIAPYTRPPASSAGDPQSERYDLTGVVHHEGETTKTGHYTAFVHLAGEEWRRYDDSKVTKVGYEDVLTENALILTYTRRSG 173          
BLAST of mRNA_Ecto-sp13_S_contig13048.2501.1 vs. uniprot
Match: A0A6H5KT93_9PHAE (USP domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT93_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 4.070e-48
Identity = 86/152 (56.58%), Postives = 106/152 (69.74%), Query Frame = 0
Query:    7 AAQHLRQVVESLKRTGQGSNTSQPSMLEETTLLKQCPTTLFLYLMRFEHVRSGGRFVERKLSHHVDVPKSIDMAPYTRPPASSAGAPQPERYDLTGVVHHEGKTTKGGHYTAFVRLAGEEWRRYNDSKVTKVGYEDVLTENALILTYTRRSG 158
            AA+++R++ ESLK   Q  N    S  EE + LK+CP T+ LYLMRF +   G      KL+H V +PK +DMAPY  PP S AGA QP+ YDLTGVVHH G+TT  GHY AFVRL G+ WRRY+D+KVT+V     LT+NALIL+YTRRSG
Sbjct:  210 AAKYVRRISESLKGKAQHDNDVGLSSREEQSWLKKCPRTVLLYLMRFAYTTRG-----EKLTHDVHIPKEMDMAPYIGPPTSRAGARQPDMYDLTGVVHHIGQTTNKGHYVAFVRLPGQWWRRYDDAKVTEVVASQALTKNALILSYTRRSG 356          
BLAST of mRNA_Ecto-sp13_S_contig13048.2501.1 vs. uniprot
Match: D7FYB9_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB9_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.340e-44
Identity = 86/152 (56.58%), Postives = 104/152 (68.42%), Query Frame = 0
Query:    7 AAQHLRQVVESLKRTGQGSNTSQPSMLEETTLLKQCPTTLFLYLMRFEHVRSGGRFVERKLSHHVDVPKSIDMAPYTRPPASSAGAPQPERYDLTGVVHHEGKTTKGGHYTAFVRLAGEEWRRYNDSKVTKVGYEDVLTENALILTYTRRSG 158
            AA+++R++ ESLK   Q  +    S +EE + LK+CP T+ LYLMRF +   G      KL H V +PK IDMAPY  PP S AGA QP+ YDL GVVHH G+TT  GHY AFVRL GE W RY+D+KVT V   DV T+NALIL+YTRRSG
Sbjct:  759 AAEYVRRISESLKGKAQHDSNVGLSSMEEQSWLKKCPRTVLLYLMRFAYTTRG-----EKLIHDVYIPKEIDMAPYIGPPTSRAGARQPDMYDLNGVVHHIGQTTNKGHYVAFVRLPGEGWLRYDDAKVTGVTDSDVRTQNALILSYTRRSG 905          
BLAST of mRNA_Ecto-sp13_S_contig13048.2501.1 vs. uniprot
Match: D7FSR8_ECTSI (Similar to deubiquitinating enzyme 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR8_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.740e-44
Identity = 85/152 (55.92%), Postives = 105/152 (69.08%), Query Frame = 0
Query:    7 AAQHLRQVVESLKRTGQGSNTSQPSMLEETTLLKQCPTTLFLYLMRFEHVRSGGRFVERKLSHHVDVPKSIDMAPYTRPPASSAGAPQPERYDLTGVVHHEGKTTKGGHYTAFVRLAGEEWRRYNDSKVTKVGYEDVLTENALILTYTRRSG 158
            AA+++R++ ESLK   Q  +    S +EE + LK+CP T+ LYLMRF +   G      KL+H V +PK IDMAPY  PP + AGA QP+ YDL GVVHH G+TT  GHY AFVRL GE W RY+D+KVT V   DV T+NALIL+YTRRSG
Sbjct: 1279 AAEYVRRISESLKGKAQHDSNVGLSSMEEQSWLKKCPRTVLLYLMRFAYTTRG-----EKLTHDVYIPKEIDMAPYIGPPTTRAGARQPDMYDLNGVVHHIGQTTNKGHYVAFVRLPGEGWLRYDDAKVTGVTDSDVRTQNALILSYTRRSG 1425          
BLAST of mRNA_Ecto-sp13_S_contig13048.2501.1 vs. uniprot
Match: I1J4V4_SOYBN (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1J4V4_SOYBN)

HSP 1 Score: 89.7 bits (221), Expect = 7.750e-18
Identity = 52/144 (36.11%), Postives = 77/144 (53.47%), Query Frame = 0
Query:   15 VESLKRTGQGSNTSQPSMLEETTLLKQCPTTLFLYLMRFEHVRSGGRFVERKLSHHVDVPKSIDMAPYTRPPASSAGAPQ--PERYDLTGVVHHEGKTTKGGHYTAFVRLAGEEWRRYNDSKVTKVGYEDVLTENALILTYTRR 156
            VE++    Q  N  +   +E+  +L Q P+    +L RF   ++ G  VE K+  H+D P  +D+ PYT       GA    P +YDL  +V H G ++  GHY  FVR A + W + +DS VT+V  E VL++ A IL Y R+
Sbjct:  285 VENIDDNLQCDNCKEEVSMEKQLMLDQTPSVAAFHLKRF---KTDGILVE-KIDKHIDFPLELDLQPYTIKVMEDPGAENDVPLKYDLYAIVVHTGLSSTSGHYFCFVRSAPDTWHKLDDSMVTEVSVETVLSQEAYILFYARQ 424          
BLAST of mRNA_Ecto-sp13_S_contig13048.2501.1 vs. uniprot
Match: A0A4P1QRH2_LUPAN (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A4P1QRH2_LUPAN)

HSP 1 Score: 88.6 bits (218), Expect = 1.940e-17
Identity = 50/123 (40.65%), Postives = 72/123 (58.54%), Query Frame = 0
Query:   33 LEETTLLKQCPTTLFLYLMRFEHVRSGGRFVERKLSHHVDVPKSIDMAPYTRPPASSAGAPQPERYDLTGVVHHEGKTTKGGHYTAFVRLAGEEWRRYNDSKVTKVGYEDVLTENALILTYTR 155
            LE+  LL Q P+    +L RF   ++ G FVE KL  HVD P  +D+ PY+    S+  + +P +YDL  VV H G +   GHY  +VR A + W R +DS+VT+V  + VL++ A IL Y +
Sbjct:  319 LEKQLLLDQTPSVAAFHLKRF---KTDGTFVE-KLDKHVDFPLELDLQPYS---VSNQNSIEPMKYDLYAVVVHLGLSATSGHYYCYVRSAPDVWHRLDDSQVTRVSADYVLSQEAYILFYAQ 434          
BLAST of mRNA_Ecto-sp13_S_contig13048.2501.1 vs. uniprot
Match: K7LF25_SOYBN (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Glycine subgen. Soja TaxID=1462606 RepID=K7LF25_SOYBN)

HSP 1 Score: 88.6 bits (218), Expect = 1.970e-17
Identity = 51/144 (35.42%), Postives = 77/144 (53.47%), Query Frame = 0
Query:   15 VESLKRTGQGSNTSQPSMLEETTLLKQCPTTLFLYLMRFEHVRSGGRFVERKLSHHVDVPKSIDMAPYTRPPASSAGAPQ--PERYDLTGVVHHEGKTTKGGHYTAFVRLAGEEWRRYNDSKVTKVGYEDVLTENALILTYTRR 156
            VE++    +  N  +   +E+  +L Q P+   L+L RF   ++ G  VE K+  H+D P  +D+ PYT        A    P +YDL  +V H G ++  GHY  FVR A + W + +DS VTKV  + VL++ A IL Y R+
Sbjct:  303 VENIDENFRCDNCKEEVSMEKQLMLDQTPSVAALHLKRF---KTNGILVE-KIDKHIDFPLELDLQPYTIKVMEDLVAENDVPLKYDLYAIVVHTGLSSTSGHYFCFVRSAPDTWHKLDDSMVTKVSVDSVLSQEAYILFYARQ 442          
BLAST of mRNA_Ecto-sp13_S_contig13048.2501.1 vs. uniprot
Match: UPI0010A2E6A3 (ubiquitin carboxyl-terminal hydrolase 20-like isoform X1 n=2 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2E6A3)

HSP 1 Score: 87.0 bits (214), Expect = 6.820e-17
Identity = 50/124 (40.32%), Postives = 73/124 (58.87%), Query Frame = 0
Query:   33 LEETTLLKQCPTTLFLYLMRFEHVRSGGRFVERKLSHHVDVPKSIDMAPYTRPPASSAGAPQPERYDLTGVVHHEGKTTKGGHYTAFVRLAGEEWRRYNDSKVTKVGYEDVLTENALILTYTRR 156
            +E+  +L Q P+    +L RF   ++ G +VE K+ +HVD P  +D+ PYT    S+  A    RYDL  +V H G ++  GHY  FVR A + W R +DSKVT+V  + VL++ A IL Y R+
Sbjct:  413 MEKRLILDQTPSVATFHLKRF---KTDGIYVE-KIDNHVDFPLELDLLPYTNCNKSNNEA---LRYDLYAIVVHVGLSSTSGHYFCFVRTAPDLWYRLDDSKVTRVAGDFVLSQEAYILLYARQ 529          
BLAST of mRNA_Ecto-sp13_S_contig13048.2501.1 vs. uniprot
Match: A0A6P4D6U4_ARADU (Ubiquitin carboxyl-terminal hydrolase n=5 Tax=Arachis TaxID=3817 RepID=A0A6P4D6U4_ARADU)

HSP 1 Score: 85.5 bits (210), Expect = 2.340e-16
Identity = 49/124 (39.52%), Postives = 71/124 (57.26%), Query Frame = 0
Query:   33 LEETTLLKQCPTTLFLYLMRFEHVRSGGRFVERKLSHHVDVPKSIDMAPYTRPPASSAGAPQPERYDLTGVVHHEGKTTKGGHYTAFVRLAGEEWRRYNDSKVTKVGYEDVLTENALILTYTRR 156
            +E+  +L Q P+    +L RF   ++ G +VE K+  HV+ P  +D+ PYT    S      P +Y+L  VV H G ++  GHY +FVR A + W + +DSKVT V  E VL+E A IL Y R+
Sbjct:  333 MEKQIMLDQTPSIATFHLKRF---KTDGTYVE-KIDKHVNFPLELDLQPYT---ISHQNNNVPLKYELYAVVVHIGFSSTSGHYFSFVRSAPDTWHKLDDSKVTMVSEESVLSEEAYILFYARQ 449          
BLAST of mRNA_Ecto-sp13_S_contig13048.2501.1 vs. uniprot
Match: A0A444WVV1_ARAHY (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444WVV1_ARAHY)

HSP 1 Score: 85.5 bits (210), Expect = 2.410e-16
Identity = 49/124 (39.52%), Postives = 71/124 (57.26%), Query Frame = 0
Query:   33 LEETTLLKQCPTTLFLYLMRFEHVRSGGRFVERKLSHHVDVPKSIDMAPYTRPPASSAGAPQPERYDLTGVVHHEGKTTKGGHYTAFVRLAGEEWRRYNDSKVTKVGYEDVLTENALILTYTRR 156
            +E+  +L Q P+    +L RF   ++ G +VE K+  HV+ P  +D+ PYT    S      P +Y+L  VV H G ++  GHY +FVR A + W + +DSKVT V  E VL+E A IL Y R+
Sbjct:  333 MEKQIMLDQTPSIATFHLKRF---KTDGTYVE-KIDKHVNFPLELDLQPYT---ISHQNNNVPLKYELYAVVVHIGFSSTSGHYFSFVRSAPDTWHKLDDSKVTMVSEESVLSEEAYILFYARQ 449          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13048.2501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK32_ECTSI1.390e-8984.18USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KT93_9PHAE4.070e-4856.58USP domain-containing protein n=2 Tax=Ectocarpus s... [more]
D7FYB9_ECTSI2.340e-4456.58USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FSR8_ECTSI2.740e-4455.92Similar to deubiquitinating enzyme 3 n=1 Tax=Ectoc... [more]
I1J4V4_SOYBN7.750e-1836.11Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Glyc... [more]
A0A4P1QRH2_LUPAN1.940e-1740.65Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Lupi... [more]
K7LF25_SOYBN1.970e-1735.42Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Glyc... [more]
UPI0010A2E6A36.820e-1740.32ubiquitin carboxyl-terminal hydrolase 20-like isof... [more]
A0A6P4D6U4_ARADU2.340e-1639.52Ubiquitin carboxyl-terminal hydrolase n=5 Tax=Arac... [more]
A0A444WVV1_ARAHY2.410e-1639.52Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Arac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 33..153
e-value: 4.7E-23
score: 82.0
NoneNo IPR availableGENE3D3.90.70.10coord: 10..158
e-value: 2.4E-33
score: 117.9
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 35..157
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 98..116
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..156
score: 22.193
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 29..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13048contigEcto-sp13_S_contig13048:1615..3366 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13048.2501.1mRNA_Ecto-sp13_S_contig13048.2501.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13048 1435..3372 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13048.2501.1 ID=prot_Ecto-sp13_S_contig13048.2501.1|Name=mRNA_Ecto-sp13_S_contig13048.2501.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=162bp
MGDHGIAAQHLRQVVESLKRTGQGSNTSQPSMLEETTLLKQCPTTLFLYL
MRFEHVRSGGRFVERKLSHHVDVPKSIDMAPYTRPPASSAGAPQPERYDL
TGVVHHEGKTTKGGHYTAFVRLAGEEWRRYNDSKVTKVGYEDVLTENALI
LTYTRRSGWAH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf