mRNA_Ecto-sp13_S_contig10007.25.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10007.25.1
Unique NamemRNA_Ecto-sp13_S_contig10007.25.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10007.25.1 vs. uniprot
Match: D7G5B1_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B1_ECTSI)

HSP 1 Score: 914 bits (2361), Expect = 0.000e+0
Identity = 464/506 (91.70%), Postives = 467/506 (92.29%), Query Frame = 1
Query:    1 RRGSVLVQGMVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQNCAFHPQGTLLAIGFSSGACKILDATDLEEVASFRYSSASLSTVRFSPDGEMVAASDTDNHVLLFKHSVVEAQQSPNAEEPYMPSEDEEVQPRDTWVYVGRHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMAEAPRRIEQNGLPTALLWHPLLGSDYEDRLVTANSEYKFKQWNADNKSCRRTTIGPTFGGPINRLEQINNIHTGGQSRPTEFVAYGTTEKVVGLVQVPFDGNSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNAASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAAEDMAPFLEQLQGGEGGDLHEELVDYFFYALLRTQGEDTTNERSTANAVPVAEVPNIMRALGYYPTEQQEVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVSKQ 1518
            RRGSVLVQGMVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQNCAFHPQGTLLAIGFSSGACKILDATDLEEVASFRYSS SLSTVRFSPDGEM                                  DEEVQPRDTWVYVGRHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMAEAPRRIEQNGLPTALLWHPLLGSDYEDRLVTAN+EYKFKQWNADNKSCRRTTIGPTFGGPINRLEQINNIHT GQSRPTEFVAYGT EKVVGLVQVPFDGNSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNAASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAA+DMAPFLEQLQGGEGGDLHEELVDYFFYALLRTQGEDTTNERSTA+AVPV EVPNIMRALGYYPTEQ EVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVSKQ
Sbjct:  416 RRGSVLVQGMVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQNCAFHPQGTLLAIGFSSGACKILDATDLEEVASFRYSSTSLSTVRFSPDGEM----------------------------------DEEVQPRDTWVYVGRHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMAEAPRRIEQNGLPTALLWHPLLGSDYEDRLVTANNEYKFKQWNADNKSCRRTTIGPTFGGPINRLEQINNIHTDGQSRPTEFVAYGTAEKVVGLVQVPFDGNSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNAASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAADDMAPFLEQLQGGEGGDLHEELVDYFFYALLRTQGEDTTNERSTASAVPVEEVPNIMRALGYYPTEQ-EVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVSKQ 886          
BLAST of mRNA_Ecto-sp13_S_contig10007.25.1 vs. uniprot
Match: A0A7S2C1Q6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1Q6_9STRA)

HSP 1 Score: 499 bits (1285), Expect = 9.460e-169
Identity = 265/518 (51.16%), Postives = 353/518 (68.15%), Query Frame = 1
Query:   16 LVQGMVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQNCAFHPQGTLLAIGFSSGACKILDATDLEEVASFRYSSASLSTVRFSPDGEMVAASDTDNHVLLFKHSV--VEAQQSPNAEEPYMPSEDEEVQPRDTWVYVGRHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMAEAPRRIEQNGLPTALLWHPLLGS----DYEDRLVTANSEYKFKQWNADNKSCRRTTIGPTFGGPINRLEQINNIHTGGQSRPTE-----------FVAYGTTEKVVGLVQVPFDGNSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNAASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAAED-MAPFLEQLQGGEGGDLHEELVDYFFYALLRTQGEDTTNERSTANAVPVAEVPNIMRALGYYPTEQQEVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVSK 1515
            LVQGM   V  +A HP  P +VI   SG ++LWDYN KVLV +R FD +RLRP+  A+ P    +AIGF+SG  K+LD + LE+VA+F+ +   +  + FSP G+M A +D D+HV ++K S+  +  ++ P AE   M     E   + TW+Y+GRHRSH R IT LEFG R+DGR +LVSVGEDRCLVEY+L +S+  +G+++ E P+RIE + +PTA  WHPLLG+    D+EDR+VTANSEYK  QWNADNKSCRRTT+GPTFG PIN+L  +  +    +   T+           ++AY T EKVVGL ++P DGN +K MGLIAHPG IS ++VS D   L+TAGG D TVN+W+INT+ +  A + + P   + +L    E+V  D         A    MAPFL  L+GGEGG+ H+ELVD+F+YA LR+QGE+TT  R  +  VP++E+PN+MRALGYYP+E Q V++M NE+KYS+FT TGEV DSVDL   I+L+VNHRP+F V K
Sbjct:    1 LVQGMSDEVHGIATHPSQPYVVIASYSGALYLWDYNQKVLVMVRQFDASRLRPRCVAYEPNANYIAIGFTSGIVKVLDPSTLEDVATFKNAKEPIVDISFSPLGDMFATADADHHVAVWKLSLERIVEEEGPEAEADPMA----EATIKATWIYLGRHRSHWRPITALEFGLRDDGRQTLVSVGEDRCLVEYDLDESSVGSGVVLKEPPKRIEVSAVPTAATWHPLLGTGANRDFEDRVVTANSEYKLMQWNADNKSCRRTTLGPTFGQPINKLLPL--VKPSPRDPDTDAADSIPHPRLGYLAYSTCEKVVGLCKMPLDGNPNKAMGLIAHPGPISCIAVSHDSQTLVTAGGTDATVNLWQINTEVLDAAEAGSYP---EPRLNEAGEAVAEDEMTPKERAEATRTRMAPFLALLEGGEGGEAHDELVDFFYYAQLRSQGENTTAPREVSGRVPLSEIPNLMRALGYYPSEAQ-VSNMVNEVKYSKFTTTGEVLDSVDLPQFIQLYVNHRPIFGVDK 508          
BLAST of mRNA_Ecto-sp13_S_contig10007.25.1 vs. uniprot
Match: W4H2Q6_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H2Q6_9STRA)

HSP 1 Score: 428 bits (1100), Expect = 2.490e-137
Identity = 216/507 (42.60%), Postives = 314/507 (61.93%), Query Frame = 1
Query:    1 RRGSVLVQGMVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQNCAFHPQGTLLAIGFSSGACKILDATDLEEVASFRYSSASLSTVRFSPDGEMVAASDTDNHVLLFKHSVVEAQQSPNAEEPYMPSEDEEVQPRDTWVYVGRHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMAEAPRRIEQNGLPTALLWHPLLGSDYEDRLVTANSEYKFKQWNADNKSCRRTTIGPTFGGPINRLEQINNIHTGGQSRPT-EFVAYGTTEKVVGLVQVPFDGNSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNAASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAAEDMAPFLEQLQGGEGGDLHEELVDYFFYALLRTQGEDTTNERSTANAVPVAEVPNIMRALGYYPTEQQEVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVSKQ 1518
            RRG++L+QG+   +  +AAHP    + + C SG + LWDY  K LV LRSFD  +LRPQ   +HP G  L +GF++G  KI+ AT LE+V +FR +  ++  V+ + DG  +AA D  N++ L++   + A            ++ +E+   D W Y+GR +SH + ITGLEFG   D +  LV+VGED+ LV+Y+L  S+   G+++   P++IEQ+  PT   WHP +   +ED +V AN EYKFKQWNA+NK+CR+TT+ PT+GGP+NR+  I       +++ +  + AY T +KVVG++++P DGN HK MGLIAH G IS+++VS DG Y ITAGGKD+ VN+W +N +A                             +  +       M PF   L+GG  G  + E+VDYF++A LRTQGE+ T  R  A+ +P+ E+P++MRALGYYPTE  E+ +M +E+KYSRFTET +  D VDL   ++L+ NHRPVF + K+
Sbjct:  362 RRGTLLMQGINDEIHGLAAHPASNHIAVSCYSGAIQLWDYVGKRLVMLRSFDRDKLRPQCLTYHPSGKHLLVGFTNGTIKIISATTLEDVTTFRQAKNAIVDVKIAADGSFIAAIDAHNYLYLWRSKAMVA------------TDADELDTTDLWSYIGRCKSHTKPITGLEFGMSPDQQALLVTVGEDKMLVDYSLSRSSVMDGIILNAPPQKIEQSATPTTFFWHPDMPGVHEDLVVIANDEYKFKQWNANNKTCRKTTLHPTYGGPLNRVLAIPTDKLAKENKTSGRYCAYSTHDKVVGVLKLPLDGNPHKSMGLIAHAGRISNVAVSFDGKYFITAGGKDMIVNLWDVNPRA-----------------------------LDALEAQGGAGMEPFASLLEGGVQGAFYSEIVDYFYFAQLRTQGENATAARDIAHHIPLLEIPHLMRALGYYPTEL-EIQNMCSEVKYSRFTETTKTVDVVDLTAFVKLYTNHRPVFGIGKK 826          
BLAST of mRNA_Ecto-sp13_S_contig10007.25.1 vs. uniprot
Match: A0A067BRG9_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BRG9_SAPPC)

HSP 1 Score: 417 bits (1072), Expect = 2.780e-136
Identity = 209/505 (41.39%), Postives = 314/505 (62.18%), Query Frame = 1
Query:    1 RRGSVLVQGMVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQNCAFHPQGTLLAIGFSSGACKILDATDLEEVASFRYSSASLSTVRFSPDGEMVAASDTDNHVLLFKHSVVEAQQSPNAEEPYMPSEDEEVQPRDTWVYVGRHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMAEAPRRIEQNGLPTALLWHPLLGSDYEDRLVTANSEYKFKQWNADNKSCRRTTIGPTFGGPINRLEQINNIHTGGQSRPTEFVAYGTTEKVVGLVQVPFDGNSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNAASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAAEDMAPFLEQLQGGEGGDLHEELVDYFFYALLRTQGEDTTNERSTANAVPVAEVPNIMRALGYYPTEQQEVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVSK 1515
            RRG++L+QG+   +  +A HP    + I C SG + LWDY  K L+ +R FD  + RPQ  A+ P G  + +GF++GA K+L  + L ++   R+S +++  ++ +PD   +AA D DN+VLL+++  +EA++  +            +   D WVY+GR RSH + ITGLEFG   D +  LV+VGEDR LVEY+L  S+   G+++   P++IEQ+ +PTA  WHP +   +ED +V AN EYKFK WNA+NK+CRRTT+ PT+GGP+NR+  I       +++   + AY T +KVVG++++P DGN HK MGLIAH G IS+++V+ DG YLITAGGKDL +N+W++   A                             +  +  +    + P+   ++GG     + E+VDYF++A LRTQGE +T  R+    +P+AE+P++MRALGYYPTE  E+ +M +E+KYSRFTET +  D++ L   ++L+VNHRPVF + K
Sbjct:  102 RRGTLLMQGIAAEIRGLATHPSATEVAISCASGVLQLWDYVTKRLLMVRHFDEDKFRPQTLAYDPLGRYMLVGFANGAIKLLHVSTLADLHLLRHSKSAILDIKVAPDSSFIAAIDADNYVLLWRNKAMEAEEISHT-----------MDATDQWVYIGRCRSHAKPITGLEFGL-SDQQALLVTVGEDRMLVEYSLSRSSVLDGIVLTAPPQKIEQSAVPTACFWHPDMPGVHEDLIVIANDEYKFKGWNANNKTCRRTTLNPTYGGPLNRILPIPLA----KAKTERYCAYSTHDKVVGVIKLPLDGNPHKSMGLIAHAGHISNVAVTCDGRYLITAGGKDLILNMWEVTPSA-----------------------------LDAMEAAGGVGVEPYGSLIEGGLHSAFYNEIVDYFYFAQLRTQGEASTAARNITQEIPLAEIPHVMRALGYYPTEL-EIQNMCSEVKYSRFTETTKTVDAIGLVDFVKLYVNHRPVFGIGK 560          
BLAST of mRNA_Ecto-sp13_S_contig10007.25.1 vs. uniprot
Match: A0A5D6YJ05_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YJ05_9STRA)

HSP 1 Score: 427 bits (1099), Expect = 3.890e-136
Identity = 231/511 (45.21%), Postives = 316/511 (61.84%), Query Frame = 1
Query:    1 RRGSVLVQGMVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQNCAFHPQGTLLAIGFSSGACKILDATDLEEVAS--FRYSSASLSTVRFSPDGEMVAASDTDNHVLLFKHSVVEAQQSPNAEEPYMPSEDEEVQPRDTWVYVGRHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMAEAPRRIEQNGLPTALLWHPLLGSDYEDRLVTANSEYKFKQWNADNKSCRRTTIGPTFGGPINRLEQINNIHTGGQSRPTEFV----AYGTTEKVVGLVQVPFDGNSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNAASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAAEDMAPFLEQLQGGEGGDLHEELVDYFFYALLRTQGEDTTNERSTANAVPVAEVPNIMRALGYYPTEQQEVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVSK 1515
            RRG++L+QG+  ++  +AAHPL  +L +   SG + LWDY+ K LV +R FDP +LRPQ  AF P G  L +GF+SGA KIL A  LE++A+   R++  +++ +R S D  +  A+D   ++ +++ S                     V   D W Y+GR R+H R ITGLEF    DG   LVSV ED+ LVEY L  S+   G+++ ++P RIEQ G PTA  WHP + +  ED L+ A  EYK KQWNA NK+CR+TT+GP++GGPINRL  I    T G S    +     AY T EKVVGL+++P DGN HK MGLIAHPGEIS++ VS DG +LITAGG D+ VN+W+++T  +  A               E     GD  ++T   S   D+ P+L  L+GG  G  + E+VDYF+ A LR QGE+ T  R     +P+ E+PN+MRALG+YPT+Q E+ HM +E+KYSRFTET +  D++ L  LI+L+VNHRPVF + K
Sbjct:  448 RRGTLLMQGIHDAIHGLAAHPLYTQLALSSYSGVLQLWDYSSKRLVMMRKFDPEKLRPQCLAFAPDGKKLFVGFTSGAIKILHAHKLEDLATGALRFAKVAVTDIRVSHDSSLFVAADASLYMGMWRAS------------------GSGVDGAD-WTYIGRCRAHSRPITGLEFSQASDGSPLLVSVSEDKTLVEYCLARSSVVDGIVLTQSPVRIEQGGTPTACCWHPEMKALQEDLLLVATDEYKVKQWNASNKTCRKTTLGPSYGGPINRLVPIPVRPTPGTSATPAYAERYCAYSTHEKVVGLLKLPLDGNPHKTMGLIAHPGEISNIDVSFDGGFLITAGGSDMVVNMWEVDTNQLDFA---------------EARGGAGD-GVATDSASTDADLEPYLSLLEGGRDGAFYHEIVDYFYLAQLRVQGENATGSREITATIPLREIPNVMRALGFYPTDQ-EIQHMVSEVKYSRFTETTQAVDTIGLKDLIKLYVNHRPVFGIGK 922          
BLAST of mRNA_Ecto-sp13_S_contig10007.25.1 vs. uniprot
Match: A0A1V9YSX3_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YSX3_9STRA)

HSP 1 Score: 424 bits (1089), Expect = 8.180e-136
Identity = 217/505 (42.97%), Postives = 316/505 (62.57%), Query Frame = 1
Query:    1 RRGSVLVQGMVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQNCAFHPQGTLLAIGFSSGACKILDATDLEEVASFRYSSASLSTVRFSPDGEMVAASDTDNHVLLFKHSVVEAQQSPNAEEPYMPSEDEEVQPRDTWVYVGRHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMAEAPRRIEQNGLPTALLWHPLLGSDYEDRLVTANSEYKFKQWNADNKSCRRTTIGPTFGGPINRLEQINNIHTGGQSRPTEFVAYGTTEKVVGLVQVPFDGNSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNAASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAAEDMAPFLEQLQGGEGGDLHEELVDYFFYALLRTQGEDTTNERSTANAVPVAEVPNIMRALGYYPTEQQEVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVSK 1515
            RRG++L+QG+   +  +A HP   ++V+ C SG V LWDY  K LV +R+FD  + RPQ   + P G  L +GF++GA K++    LE++ +FR S A +  ++ +PD   +AA D +N++LL+++  +EA +  N              P++ WVY+GR +SH + ITG EF    D +  LV+V EDR LVEYNL  S+   G++++  P++IEQ+ +PTA  WHP +    ED +V AN+EYKFKQWNA+NK+CRRT++ PT+GGP+NR+  I       ++R   + AY T EK+VGL+++PFDGN HK MGLIAH G IS+++V+ DG Y ITAGGKD+ VN+W++N   +    +       Q  L VE                      P+   L+GG  G  + E+VDYF++A LRTQGE +T  R+    +P+ E+P++MRALG+YPTE  E+ HM +E+KY +FTET +  DS+ L   IRL+VNHRPVF + K
Sbjct:  356 RRGTLLMQGIADEIHGLATHPSTTQIVVSCYSGAVQLWDYLTKRLVMVRNFDVEKFRPQCLVYDPFGRHLIVGFTNGAIKLVHVATLEDIYTFRQSKAPIIDIKVAPDSSFIAAIDAENYLLLWRNKAMEADEMDN-------------DPQEQWVYIGRCKSHTKPITGFEFAI-SDQQALLVTVAEDRMLVEYNLSRSSVLDGIILSAPPQKIEQSAIPTACFWHPEMPGVREDLIVVANNEYKFKQWNANNKTCRRTSLNPTYGGPLNRVLPIPLD----KNRTERYCAYSTHEKIVGLIKLPFDGNPHKSMGLIAHSGRISNVAVTCDGRYFITAGGKDMIVNMWEVNPSGLDMMEA-------QGGLGVE----------------------PYSSLLEGGIDGQFYNEIVDYFYFAQLRTQGEASTAARNITQEIPLNEIPHVMRALGFYPTEL-EIQHMCSEVKYCKFTETTKTVDSIHLVDFIRLYVNHRPVFGMGK 812          
BLAST of mRNA_Ecto-sp13_S_contig10007.25.1 vs. uniprot
Match: A0A3R7GKJ3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GKJ3_9STRA)

HSP 1 Score: 414 bits (1065), Expect = 7.090e-135
Identity = 218/514 (42.41%), Postives = 324/514 (63.04%), Query Frame = 1
Query:    1 RRGSVLVQGMVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQNCAFHPQGTLLAIGFSSGACKILDATDLEEVASFRYSSASLSTVRFSPDGEMVAASDTDNHVLLFKHSVVEAQQSPNAEEPYMPSEDEEVQPRDTWVYVGRHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMAEAPRRIEQNGLPTALLWHPLLGSDYEDRLVTANSEYKFKQWNADNKSCRRTTIGPTFGGPINRL--------EQINNIHTGGQSRPTEFVAYGTTEKVVGLVQVPFDGNSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNAASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAAEDM--APFLEQLQGGEGGDLHEELVDYFFYALLRTQGEDTTNERSTANAVPVAEVPNIMRALGYYPTEQQEVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVS 1512
            RRG++L+QG+  S+  +AAHP LP+L +   SG V LWDY+ K L+ +R FD  +LRPQ   F   G  L +GF+SG  K+L A  L+++A+FR   A+++ V  SPD  +  A D + ++ +++   V      + +              D WVY+GR R+H + ITGLEF    DG+  LVSV EDR L EY L  S+   G+++ +AP R+EQ+ +PTA  WHP L    ED ++ AN EYK KQWN  N++CRRTT+GP++GGPINRL        +QI    +GG +    +  Y T EKVVGL+++P DGN HK MGLIAHPG+IS++ V+ DG++L+TAGG DL VN+W+I+T  +    +   P   +T  +  +++++ +  +        +D+  AP+L  L+GG  G  + E+VDYF+ A LR QGE++T  R     +P+ E+PN+MRALG+YPT++ E+ HM +E++YSRFTET    +++ L+  I+L++NHRPVF V+
Sbjct:   99 RRGTLLMQGINDSIHGLAAHPRLPQLALSSYSGVVQLWDYSAKRLIMVRRFDAEKLRPQCLTFARDGRKLVVGFTSGIVKVLHAQRLDDLATFRLGKAAITDVLVSPDSALFVALDANLYLGMWRAKQVTFSSDVSDDS-------------DEWVYLGRCRAHSKPITGLEFSRDGDGQPVLVSVSEDRTLAEYCLERSSILDGVVLKQAPTRVEQSAVPTACCWHPDLRGIQEDLVIVANDEYKIKQWNTGNQTCRRTTLGPSYGGPINRLVPVPLREDDQIAAEASGGVAE--RYCVYSTHEKVVGLLKLPLDGNPHKAMGLIAHPGKISNVDVTFDGSHLLTAGGDDLVVNMWEIHTYQLDLLEARGTPRVEETVEEGIEDTIKEELLVVAKNQLDEDDLELAPYLALLEGGREGPFYNEIVDYFYLAQLRVQGENSTECREITAQIPLREIPNVMRALGFYPTDE-EIQHMVSEVRYSRFTETSRPVENIGLHDCIKLYINHRPVFGVA 596          
BLAST of mRNA_Ecto-sp13_S_contig10007.25.1 vs. uniprot
Match: A0A1V9ZR22_9STRA (C2 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZR22_9STRA)

HSP 1 Score: 424 bits (1091), Expect = 4.180e-134
Identity = 209/505 (41.39%), Postives = 315/505 (62.38%), Query Frame = 1
Query:    1 RRGSVLVQGMVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQNCAFHPQGTLLAIGFSSGACKILDATDLEEVASFRYSSASLSTVRFSPDGEMVAASDTDNHVLLFKHSVVEAQQSPNAEEPYMPSEDEEVQPRDTWVYVGRHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMAEAPRRIEQNGLPTALLWHPLLGSDYEDRLVTANSEYKFKQWNADNKSCRRTTIGPTFGGPINRLEQINNIHTGGQSRPTEFVAYGTTEKVVGLVQVPFDGNSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNAASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAAEDMAPFLEQLQGGEGGDLHEELVDYFFYALLRTQGEDTTNERSTANAVPVAEVPNIMRALGYYPTEQQEVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVSK 1515
            RRG++L+QG+   +  +A HP    LV+ C+SG + LWDY  K L+ +R+FD  + RPQ   + P G  + +GF++G  K+LD T L  + + R S +++  V+ +PD   +AA DTDN++LL+++  +E +    A           + P+D W+Y+GR R+H + +TG EF    D +  LV+VGEDR LVEY+L  S+   G+++A  P ++EQ+ +PTA  WHP +   +ED +V AN+EYKFKQWNA+NK+CRRTT+ PT+GGP+NR+  +         +   + AY T +KVVGL+++PFDGN HK MGLIAH G IS+++ + DG Y +TAGG D+ VN+W++N  A                             +  +  S    + PF   ++GG  GD ++E+VDYF++A LRTQGE +T  R   + +P+ EVP++MRALG+YPTE  E+ +M +E+KYSRFTET +  +++ L   +RL+VNHRPVF + K
Sbjct:  562 RRGTLLMQGIADEIRGLATHPSAAHLVVSCDSGAIQLWDYVTKRLMMMRNFDVDKDRPQCLVYEPHGRYILVGFANGCIKLLDVTTLATLHTLRQSKSAVVDVKVAPDCSFIAAIDTDNYLLLWRNKAMETEDPQQA-----------LDPQDQWMYIGRCRAHAKPVTGFEFNM-SDQQALLVTVGEDRMLVEYSLSRSSVLDGIILAAPPHKVEQSAVPTACFWHPEVPGVHEDLIVIANNEYKFKQWNANNKTCRRTTLNPTYGGPLNRVLPLPI------DKQDRYCAYSTHDKVVGLIKLPFDGNPHKSMGLIAHAGRISNVAATCDGRYFVTAGGADMIVNLWEVNPTA-----------------------------LDVMEASGGVGVEPFGALIEGGLRGDFYDEIVDYFYFAQLRTQGEASTAARDITHEIPLGEVPHVMRALGFYPTEL-EIQNMCSEVKYSRFTETSKTVETIGLADFVRLYVNHRPVFGIGK 1018          
BLAST of mRNA_Ecto-sp13_S_contig10007.25.1 vs. uniprot
Match: A0A067D054_SAPPC (C2 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D054_SAPPC)

HSP 1 Score: 422 bits (1085), Expect = 9.260e-134
Identity = 214/506 (42.29%), Postives = 316/506 (62.45%), Query Frame = 1
Query:    1 RRGSVLVQGMVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQNCAFHPQGTLLAIGFSSGACKILDATDLEEVASFRYSSASLSTVRFSPDGEMVAASDTDNHVLLFKHSVVEAQQ-SPNAEEPYMPSEDEEVQPRDTWVYVGRHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMAEAPRRIEQNGLPTALLWHPLLGSDYEDRLVTANSEYKFKQWNADNKSCRRTTIGPTFGGPINRLEQINNIHTGGQSRPTEFVAYGTTEKVVGLVQVPFDGNSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNAASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAAEDMAPFLEQLQGGEGGDLHEELVDYFFYALLRTQGEDTTNERSTANAVPVAEVPNIMRALGYYPTEQQEVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVSK 1515
            RRG++L+QG+   +  +A HP    + I C SG + LWDY  K L+ +R FD  + RPQ  A+ P G  + +GF++GA K+L  + L ++   R+S +++  ++ +PD   +AA D DN+VLL+++  +EA++ SP             + P D WVY+GR RSH + ITGLEFG   D +  LV+VGEDR LVEY+L  S+   G+++   P++IEQ+ +PTA  WHP +   +ED +V AN EYKFK WNA+NK+CRRTT+ PT+GGP+NR+  I    T    +   + AY T +KVVG++++P DGN HK MGLIAH G IS+++++ DG YLITAGGKDL +N+W++   A                             +  +  +    + PF   ++GG  G  + E+VDYF++A LRTQGE +T  R+    +P+AE+P++MRALGYYPTE  E+ +M +E+KYSRFTET +  D++ L   ++L+VNHRPVF + K
Sbjct:  500 RRGTLLMQGIAAEIRGLATHPSATEVAISCASGVLQLWDYVSKRLLMVRHFDEDKFRPQTLAYDPLGRYMLVGFANGAIKLLHVSTLADLHMLRHSKSAILDIKVAPDSSFIAAIDADNYVLLWRNKGMEAEEISPT------------MDPTDQWVYIGRCRSHAKPITGLEFGL-SDQQALLVTVGEDRMLVEYSLSRSSVLDGIVLTAPPQKIEQSAVPTACFWHPDMPGVHEDLIVIANDEYKFKGWNANNKTCRRTTLNPTYGGPLNRILPIPVAKT----KSERYCAYSTHDKVVGVIKLPLDGNPHKSMGLIAHAGHISNVAMTCDGRYLITAGGKDLILNMWEVTPSA-----------------------------LDAMEAAGGVGVEPFGSLIEGGLHGAFYNEIVDYFYFAQLRTQGEASTAARNITQEIPLAEIPHVMRALGYYPTEL-EIQNMCSEVKYSRFTETTKTVDAIGLVDFVKLYVNHRPVFGIGK 958          
BLAST of mRNA_Ecto-sp13_S_contig10007.25.1 vs. uniprot
Match: A0A8K1C420_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C420_PYTOL)

HSP 1 Score: 421 bits (1081), Expect = 1.290e-133
Identity = 218/511 (42.66%), Postives = 313/511 (61.25%), Query Frame = 1
Query:    1 RRGSVLVQGMVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQNCAFHPQGTLLAIGFSSGACKILDATDLEEVASFRYSSASLSTVRFSPDGEMVAASDTDNHVLLFK----HSVVEAQQSPNAEEPYMPSEDEEVQPRDTWVYVGRHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMAEAPRRIEQNGLPTALLWHPLLGSDYEDRLVTANSEYKFKQWNADNKSCRRTTIGPTFGGPINRLEQINNIHTGGQSRPTE-FVAYGTTEKVVGLVQVPFDGNSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNAASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAAEDMAPFLEQLQGGEGGDLHEELVDYFFYALLRTQGEDTTNERSTANAVPVAEVPNIMRALGYYPTEQQEVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVSKQ 1518
            RRG++L+QG+   +  +A HP   +L +   SG V LWDYN + L+ +R FD  + RPQ   F P+G  L +GF+SG  KIL A  LE+++  R S  +++ +R S D  +  A D    + +++    H +  +    +  E     +D        W Y+GR R+H + ITGLEF    DG+  LVSV ED+ LVEY L  S+   G+++ ++P +IEQ+  PTA  WHP + +  ED L+ AN EYK KQWNA+NK+CR+TT+GP++GGPINRL  I  + +     P+E + AY T +KVVGL+++P DGN HK MGLIAHP EIS++ VS DGNYL+TAGGKDL VN+W+I +                               +  +  SA + + P+L  L+GG+ G  + E+VDYF++A LR QGE+ T  R     +P+ E+PN+MRALG+YPTEQ EV HM +E+KYS+FTET +  +S+DL   I+L+VNHRP+F + K+
Sbjct:  435 RRGTLLMQGINDEIHGLATHPKYSQLALSSYSGAVQLWDYNSRRLIMMRKFDAEKFRPQCLTFSPEGKRLFVGFTSGVIKILHAQKLEDISMLRLSKVAITDIRVSLDASLFVAVDAQFFLGMWRAKGRHPIASSPDDGDGLE-----DDSNAALNTDWTYLGRCRAHAKPITGLEFFQTSDGQPLLVSVAEDKTLVEYCLSRSSIVDGIVLTQSPVKIEQSATPTACCWHPEMKTLQEDMLIVANDEYKLKQWNANNKTCRKTTLGPSYGGPINRLVPIP-VKSMSNGTPSERYCAYSTHDKVVGLLKLPLDGNPHKSMGLIAHPNEISNVDVSCDGNYLLTAGGKDLVVNLWEIYSNR-----------------------------LDLVEASAGDGLEPYLSLLEGGQDGAFYHEIVDYFYFAQLRVQGENATQPREITARIPLQEIPNVMRALGFYPTEQ-EVQHMWSEVKYSQFTETTQAVESIDLKEFIKLYVNHRPLFGIGKE 909          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10007.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5B1_ECTSI0.000e+091.70Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A7S2C1Q6_9STRA9.460e-16951.16Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W4H2Q6_9STRA2.490e-13742.60Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A067BRG9_SAPPC2.780e-13641.39Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A5D6YJ05_9STRA3.890e-13645.21Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1V9YSX3_9STRA8.180e-13642.97Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A3R7GKJ3_9STRA7.090e-13542.41Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A1V9ZR22_9STRA4.180e-13441.39C2 domain-containing protein n=1 Tax=Achlya hypogy... [more]
A0A067D054_SAPPC9.260e-13442.29C2 domain-containing protein n=2 Tax=Saprolegnia T... [more]
A0A8K1C420_PYTOL1.290e-13342.66Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10007contigEcto-sp13_S_contig10007:278..6032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score900.2
Seed ortholog evalue4.3e-259
Seed eggNOG ortholog2880.D7G5B1
Preferred nameWDR66
Model size1530
Hectar predicted targeting categoryother localisation
GOsGO:0003341,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0016043,GO:0030030,GO:0031514,GO:0032838,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120036,GO:0120038
Exons11
EggNOG free text desc.cilium movement
EggNOG OGs2CCTB@1,2QQ05@2759
Ec32 ortholog descriptionflagellar associated protein
Ec32 orthologEc-14_006870.1
Cds size1503
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10007.25.1prot_Ecto-sp13_S_contig10007.25.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10007 278..6005 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462499.7111895-CDS-Ecto-sp13_S_contig10007:277..3671681462499.7111895-CDS-Ecto-sp13_S_contig10007:277..367Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10007 278..367 -
1681462499.7257063-CDS-Ecto-sp13_S_contig10007:803..8631681462499.7257063-CDS-Ecto-sp13_S_contig10007:803..863Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10007 804..863 -
1681462499.7352252-CDS-Ecto-sp13_S_contig10007:1157..12981681462499.7352252-CDS-Ecto-sp13_S_contig10007:1157..1298Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10007 1158..1298 -
1681462499.749487-CDS-Ecto-sp13_S_contig10007:1732..19001681462499.749487-CDS-Ecto-sp13_S_contig10007:1732..1900Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10007 1733..1900 -
1681462499.7636402-CDS-Ecto-sp13_S_contig10007:2535..27001681462499.7636402-CDS-Ecto-sp13_S_contig10007:2535..2700Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10007 2536..2700 -
1681462499.798059-CDS-Ecto-sp13_S_contig10007:3226..34181681462499.798059-CDS-Ecto-sp13_S_contig10007:3226..3418Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10007 3227..3418 -
1681462499.8104105-CDS-Ecto-sp13_S_contig10007:3801..39091681462499.8104105-CDS-Ecto-sp13_S_contig10007:3801..3909Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10007 3802..3909 -
1681462499.8347101-CDS-Ecto-sp13_S_contig10007:4340..45111681462499.8347101-CDS-Ecto-sp13_S_contig10007:4340..4511Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10007 4341..4511 -
1681462499.84416-CDS-Ecto-sp13_S_contig10007:5014..51161681462499.84416-CDS-Ecto-sp13_S_contig10007:5014..5116Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10007 5015..5116 -
1681462499.853801-CDS-Ecto-sp13_S_contig10007:5350..55541681462499.853801-CDS-Ecto-sp13_S_contig10007:5350..5554Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10007 5351..5554 -
1681462499.8639553-CDS-Ecto-sp13_S_contig10007:5903..60051681462499.8639553-CDS-Ecto-sp13_S_contig10007:5903..6005Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10007 5904..6005 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462499.8772085-UTR-Ecto-sp13_S_contig10007:6005..60321681462499.8772085-UTR-Ecto-sp13_S_contig10007:6005..6032Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10007 6006..6032 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10007.25.1

>prot_Ecto-sp13_S_contig10007.25.1 ID=prot_Ecto-sp13_S_contig10007.25.1|Name=mRNA_Ecto-sp13_S_contig10007.25.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=501bp
MVGSVACVAAHPLLPRLVILCESGDVHLWDYNLKVLVTLRSFDPARLRPQ
NCAFHPQGTLLAIGFSSGACKILDATDLEEVASFRYSSASLSTVRFSPDG
EMVAASDTDNHVLLFKHSVVEAQQSPNAEEPYMPSEDEEVQPRDTWVYVG
RHRSHGRAITGLEFGTREDGRVSLVSVGEDRCLVEYNLPDSNQETGLLMA
EAPRRIEQNGLPTALLWHPLLGSDYEDRLVTANSEYKFKQWNADNKSCRR
TTIGPTFGGPINRLEQINNIHTGGQSRPTEFVAYGTTEKVVGLVQVPFDG
NSHKMMGLIAHPGEISSLSVSGDGNYLITAGGKDLTVNVWKINTQAVQNA
ASANMPAKNQTQLKVEQESVRGDPSMSTIIPSAAEDMAPFLEQLQGGEGG
DLHEELVDYFFYALLRTQGEDTTNERSTANAVPVAEVPNIMRALGYYPTE
QQEVAHMSNEIKYSRFTETGEVEDSVDLNGLIRLFVNHRPVFPVSKQVKY
*
back to top

mRNA from alignment at Ecto-sp13_S_contig10007:278..6032-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10007.25.1 ID=mRNA_Ecto-sp13_S_contig10007.25.1|Name=mRNA_Ecto-sp13_S_contig10007.25.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5755bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10007:278..6032- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGAGGGGCTCTGTCCTGGTGCAGGGAATGGTGGGGTCGGTAGCTTGTGT GGCGGCTCACCCCCTGTTGCCGCGATTGGTGATACTGTGCGAGTCCGGTG ATGTGCATCTGTGGGACTACAATCTCAAGGTAGGACACGAGACAAACGCT GGCTAAAAAACTGAATTCGTGGTTGATGCGTAGTTTATGAGTGCGTGACA TGTTTGATGGAGTGTGTGTTGGCTGCATGGGGAGCAACAATGGAAAAACC GTAACGTGGAATCTTCAGGTTGGCGATGCGATGCCCGTAGACAGATCTTC CAGGGAGTTTGCATACACAACTGCGCATTTGGGGACCGATACCAGCAACA CGAAAGAGTGTTACCATCACGACACTCTCTCAGACCCGCCCACTGTGTCC TCACTCTTCCTCTTTTGTGGTCACGTCTGCATCATGTCTTCGCCCACGCA TCTCTCGGTACGCCTCCATATCGAGCAGGTGCTGGTGACTCTTCGTTCAT TCGACCCGGCTCGCCTACGGCCGCAAAACTGCGCATTCCACCCTCAAGGA ACCCTCCTTGCAATTGGTTTCAGCTCAGGTGCTTGCAAGATCCTAGACGC AACCGACCTCGAGGAAGTAGCTAGCTTTCGCTATTCTTCGGCCTCCCTAT CCACCGTCCGCTTCAGCCCCGACGGAGAAATGGTGAGCCTTGGATGGTCG TGCATGTGAAAATTGAAGACGTTTGGAGGGAGGTGGTTGGGTGAAAATAA ATCTGGGCGAAAATGACTCCCAGTGTTTGGGACATGTGCAAAGTGCGAAG ACCGTGGCGTGCGTCCTGCACATGTATATTGGTCGCGAGGAAATACATAC GTTGGAAAGGAAAAGGCAGCCAACAGAGTTCATGCTGCACGCTCTTCCGT GTGAACACTTGTTCAGGTGGCTGCAAGTGACACTGATAATCACGTGTTGC TATTCAAGCACTCGGTGGTAGAAGCGCAGCAGTCACCAAACGCGGAAGAA CCCTACATGCCGAGCGAGGTGGGAAACACTGCTGCTAGGCATGTGGTTTT CAGATGGATGTGCGAAATCGGTTGTACAACAGGTCAAACTGCTCGTATAG CGCCGCTCGTGGTAGCCTTGTGTCTGCGGTTGCGCAGTACTTTACCATGA ACACTGCGGGACCACAGGTTTGTCAAACGTCCCGCTTCCCCAGACAAACA TCACTTCAAACTCCCAAGTATACGCACGAATGTACTTCGCGAGTAATTTC AACATGGTGTAAGCATGTACATATAGGGGAAAACAAGGAACACTAGAATG ATAAAGCACTTCTGTCCTGTTTGAAAGTAGGAGTATCGATCGGGCTCGTG GAAATATCACTGCGATCCAACACTTCGCGCGCCTTTCTTATTGGATGGAC CTACCGTACGTAGTAACACGAATGTCAGATACCAGGTATTTTGCGAAATT GATGACGCACCCGTTGGCTGCGGCCCCGCTCGTGGCAAACGTTCGACGAA TCGTGGATCGTGTTACTGTAGGACGAAGAGGTACAGCCACGAGACACGTG GGTGTATGTAGGACGCCACCGTAGCCACGGCAGAGCGATCACGGGGCTAG AGTTCGGCACTCGTGAAGATGGAAGGGTGTCACTCGTCAGCGTCGGCGAG GATAGGTGTCTCGTTGAGTATAACCTGCCCGACAGCAACCAGGTGCGTCC GCTGAGCATGTGTGTTTCCTCAACTTGTCCCAGAGAACGCGCGTTGTTAA CCTTGTTGGCGTCGCAGTTTTACGCGTGTGTTTCCAAGATATGCCTGCCG GCGAGGAATGAGCCTCCCCTAATACTAGCCTATATCCAAGGATGGCAATA GGATTATATGTTATCGCTCGCCTGCAAGCGGCTGAGGTACGCGGGCAACC AAGTTTACACGTCTGGTTGCTTTCCAAGGTTGATCGTCGGAGACATCTCT CATTGAATCGTCCGACTAGGCGCGAGTCTTTCCTCGGTCTTCATGGATCC CATCAGGTCATGATGTCATGACGACGAACTGAAGCTTGACGATATTTGTG ACATCAAGACCTGTTCATGTACAAGCCATCGTTATCAACAAACAACACCG CGCTGGATGGGCCGGCACGACAGGAAACTGGGCTCTTGATGGCGGAGGCA CCGAGGCGCATTGAGCAGAACGGCCTGCCGACGGCCCTCCTTTGGCACCC TCTCCTGGGCTCCGACTATGAGGATCGATTGGTGAACATTGTCGTGATTA TGTTCGAATGGTTCTTTGGTATTGGAGGAAAAATCGTCTATGAAACGCGC TCTATGCAGCCTAGTAATGAAAGTGTCACGGCAGCAGCGCTAACACGACG GTGTGACAAAAGAGTCGACCCCGGAATCCTCTCTGAAATTATTGAAACAA TATTGATATCACCTGGCGTTTTTGTCATCTGTGCCTCCCCCTCGGCTTGG GGACAATGGGCATTTTAGAATTATTTTGTATCGGCGTACCTTCTTAGCAC CTCTCTCGAGGTCTTACACGTAGTTCCAATGAAAGGCACTCAATGATTGA ACTGTAAAATTCGAAAGCAATAAGAAACGAGAATGTCCTTGTGTGTTGTC CGTGAGCTGCGCAGGTGACCGCGAACAGCGAGTACAAGTTCAAGCAGTGG AACGCTGACAATAAAAGCTGCCGTAGGACAACGATCGGACCTACGTTCGG GGGCCCCATCAACCGGTTGGAGCAAATCAACAACATACATACGGGCGGAC AGTCGCGCCCAACCGAGTTTGTGGCTTATGGCACTACGGAAAAGGTGGTC GGGTTGGTGAGTCACAACGTTTGAATCAATGTACGCTAGGCTTAAGTTCT TGCGCCACCCGCTCGAAGGTTCTTAGAAGATACGCGTGTAGTACCACTAC CCAGTGGCGAGTACGTGAAGCACAGCCTGGGTGGAAGAGTTCGCGTCCCG ATTGTGTCTATCATGCTGAAGACTGGATGGGGGGTGTTTCGGGGATGTCC ATACAACGATTGTACCAACAAGTGAGCTTGTCTCGGGGGGCGTTGCTATT CATGACGGATAACCGACCGACGCGTTCAGCTGTGGAAGATTGTGTACTCA CAGACGCGTCCTTGTTGTTGAAAAAATACAGCGGTGTCGCTGATGGCGCC CGACGGAGCGCTGCTTGAGCTTTGCAGACAAAACAACGTTCAATAAAAAA AAAACGTTCTTTATTGCGGTGTGCTTGATCCGTTTCTCGGGTGGACATCG GCACCCCCAGTGCACACTGAGTGTATGCATTCCACATGGTGCTCCTCCTT CCTTAGCCGCTTAACGATTTCCGACCCAACAGGTTCAGGTACCTTTTGAT GGGAATTCTCACAAGATGATGGGCCTTATCGCGCATCCCGGCGAGATCAG TTCTCTGTCTGTCAGCGGCGACGGGAACTACTTGATCACCGCTGGGGGGA AAGACCTCACCGTCAATGTGTGGAAAATAAACACCCAGGCCGTGCAGGTG ACCGAAAAGAGACAGTCCATTCGCGTGAAGAGTTTCCAGGTATCGGTTTT ACCTTTACGTGCCATGTTGCGGGGTGGAGAATCACGTGATGCAAAGCGAG GGGCAGGGTGAAACTTACAAACTCATCATTCGTAGCATCATTCGTAGCGA TTGGCGGGTACTTACGAATGGCTCATCCGGTAGACCTCTTGAGGCCTTGG ATACTACCGCAGGTGGAGCACGAAGCCAATGTATTCGAAACCGGCACTCA CACGGTCAAAATTTCGCCAAGTCAACGACAGATTTGCATTACTTCGTACT GCTGGGACTACAGTTATTGACTGGAGTATAGGCTGCATTGATATTGGTAC CTCATTTTAGCTTGGCTCGTGACCACCGGAATTGTTTTGTTGCATTGAAA AACACCGTAGAGGAGGTACTGGGACAAAATCATACCGTCTGTCCATGTAG AAACAACACCGCTTGCAACAACAATCGATTTTAGCGAAGGTGCACCGAAG TTTCAAAATCAATGAAACTGAGGTACGGCTGTGCACGTCTTCTCCGGCTA TGCCATAGACAGATGCAATAACGTTGTACCATCACGGTTGCAACGTTGCC TTTCGTCGGTCAACCATTGTCGTGGACAATAGAACGCAGCTTCTGCCAAC ATGCCAGCCAAGAACCAGACCCAGCTGAAAGTGGAGCAAGAATCAGTCCG AGGAGACCCAAGCATGAGCACGATCATCCCCTCTGCGGCGGAAGACATGG CACCATTTCTGGAACAGCTGCAGGGGGGAGAAGGGGGAGATCTGCACGAG GTGCACCAAGACATCTAATCATTGGCAAAGACGGAACTGACACATTTAAT TCAGAGACTTGATGCAAGTGTACGACATGGCTACTCTCATCGCTGAATCT GGTGGCTTGAAACGTACTTTCGAGCCGAGTCCTGACTGTATTCGCGACGA GCTACGTATGGTCGCCGAGGTGCACCGGCGGGGGGAGCTCGTTGTTTAGC GTTCTTTCAGGAGAAACGTGGAAGGACGGCGGGAGGCCACAACCAAGAGC AACATCGCGGGGATATCGTTCTCCATCCAATCTCGACTGTTTGGCCGCTT TCTAGCGTTGTCGGGCAGGAGGATATTCACGACTTGCAGTATTGCGGATT GTTCGACAAACCGCCGTTGAATTGACGTATTGTGTGTTGCCCTTTCGATA TGCTGTGCTACTGAAAATTGCGTGAATTTCCCAGGAACTGGTGGATTACT TTTTCTACGCACTTTTGAGGACTCAGGGGGAGGACACGACGAACGAACGG TCAACGGCTAACGCGGTACCTGTGGCGGAGGTTCCAAACATCATGAGGGC CTTAGGCTACTATCCGACGGAGCAGGTAGACAATCCCCCCCACTCTGTAA AACATGATTTGGTGTGATTGAGCGAGCGGTGTGCACGCAGCGTGTGAAGC GACTGGGCCGATGAGTGAAACGCGTCCTGGGCGGCTGGTAGGATCACTGC ATCAGTATTCGAAGACACGGAAACAGTTCCATAGACCATTGGAGTAATTG ATCTTTAATGATGATTTCGTGTACAGAATGTGGCCAATCCTGTTCATACT ACTACAATAATTCTACAACTACATGCTTTGTCTTCCACCCCAATCTCGTC TCTTGTTCTCCTTGCTAAGCAGGAGGTTGCCCACATGTCGAACGAGATCA AGTACTCGCGATTCACCGAGACCGGGGAGGTGAGACTTACTACTGTATTC CATGGCTGAAGCGCATATTTTGGGCGGTTAACTCGACCTCTCTTCCAACT GTGCCGTCAAACCATCGGAAAGAGGACATGTCCCAAACTGAACGCAGGTA CACACACGGAAGGAGGAGTTGCAGAAGGCGTAAGTGGGTGTTCTATTAGC AGAGTCTTAGGGGATTACCAAAAGCTCTAGATCTGAACATACACCGATAG AAATAACCTCGCCGCTGTTTGTTCTAGACATTATGGAGAGTGCAAAACTT GGATCTGTGCTCTTGACTTTGATCAAGCCAAAAGATGAACAAAATTAAGC ATCGAACGTTCCAGTATTGTTCGACGGTGAGCCGTCGACTAACGTCCTTT GTTTTCCTAAACACGATTGATTGCCGTTCTGTTAACAATGTGGCAAAACT TGGGATTGATCGAAGGTGGAAGATTCTGTGGATCTGAATGGATTGATCCG CCTCTTCGTGAACCATCGTCCGGTGTTCCCGGTCAGCAAACAGGTGAAGT ACTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10007:278..6032-

>mRNA_Ecto-sp13_S_contig10007.25.1 ID=mRNA_Ecto-sp13_S_contig10007.25.1|Name=mRNA_Ecto-sp13_S_contig10007.25.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1503bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10007:278..6032- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGGGGTCGGTAGCTTGTGTGGCGGCTCACCCCCTGTTGCCGCGATT
GGTGATACTGTGCGAGTCCGGTGATGTGCATCTGTGGGACTACAATCTCA
AGGTGCTGGTGACTCTTCGTTCATTCGACCCGGCTCGCCTACGGCCGCAA
AACTGCGCATTCCACCCTCAAGGAACCCTCCTTGCAATTGGTTTCAGCTC
AGGTGCTTGCAAGATCCTAGACGCAACCGACCTCGAGGAAGTAGCTAGCT
TTCGCTATTCTTCGGCCTCCCTATCCACCGTCCGCTTCAGCCCCGACGGA
GAAATGGTGGCTGCAAGTGACACTGATAATCACGTGTTGCTATTCAAGCA
CTCGGTGGTAGAAGCGCAGCAGTCACCAAACGCGGAAGAACCCTACATGC
CGAGCGAGGACGAAGAGGTACAGCCACGAGACACGTGGGTGTATGTAGGA
CGCCACCGTAGCCACGGCAGAGCGATCACGGGGCTAGAGTTCGGCACTCG
TGAAGATGGAAGGGTGTCACTCGTCAGCGTCGGCGAGGATAGGTGTCTCG
TTGAGTATAACCTGCCCGACAGCAACCAGGAAACTGGGCTCTTGATGGCG
GAGGCACCGAGGCGCATTGAGCAGAACGGCCTGCCGACGGCCCTCCTTTG
GCACCCTCTCCTGGGCTCCGACTATGAGGATCGATTGGTGACCGCGAACA
GCGAGTACAAGTTCAAGCAGTGGAACGCTGACAATAAAAGCTGCCGTAGG
ACAACGATCGGACCTACGTTCGGGGGCCCCATCAACCGGTTGGAGCAAAT
CAACAACATACATACGGGCGGACAGTCGCGCCCAACCGAGTTTGTGGCTT
ATGGCACTACGGAAAAGGTGGTCGGGTTGGTTCAGGTACCTTTTGATGGG
AATTCTCACAAGATGATGGGCCTTATCGCGCATCCCGGCGAGATCAGTTC
TCTGTCTGTCAGCGGCGACGGGAACTACTTGATCACCGCTGGGGGGAAAG
ACCTCACCGTCAATGTGTGGAAAATAAACACCCAGGCCGTGCAGAACGCA
GCTTCTGCCAACATGCCAGCCAAGAACCAGACCCAGCTGAAAGTGGAGCA
AGAATCAGTCCGAGGAGACCCAAGCATGAGCACGATCATCCCCTCTGCGG
CGGAAGACATGGCACCATTTCTGGAACAGCTGCAGGGGGGAGAAGGGGGA
GATCTGCACGAGGAACTGGTGGATTACTTTTTCTACGCACTTTTGAGGAC
TCAGGGGGAGGACACGACGAACGAACGGTCAACGGCTAACGCGGTACCTG
TGGCGGAGGTTCCAAACATCATGAGGGCCTTAGGCTACTATCCGACGGAG
CAGCAGGAGGTTGCCCACATGTCGAACGAGATCAAGTACTCGCGATTCAC
CGAGACCGGGGAGGTGGAAGATTCTGTGGATCTGAATGGATTGATCCGCC
TCTTCGTGAACCATCGTCCGGTGTTCCCGGTCAGCAAACAGGTGAAGTAC
TGA
back to top