mRNA_Ecto-sp13_S_contig13029.2486.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: D7FZM4_ECTSI (CRAL-TRIO domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FZM4_ECTSI) HSP 1 Score: 795 bits (2053), Expect = 5.640e-279 Identity = 410/455 (90.11%), Postives = 423/455 (92.97%), Query Frame = 1
Query: 223 LSAPCPRSSSCERCSALPGSRHFSEISSKGGDLSSNSSSTVAAGLRRADSRWHVGLVLGLLIGGLCYGRGGGGDSGVAAKDGGEGASWFDDKPAFVACAAACSVVLSVAVVAWRRTGNDDVIKSETVAGCGRTAGALSIFGRCLRRGRGGSAGRKEAFGGGGEGGEGEPLLAAGSPDSR-TSSSLSEPGERSDVEAGAGVGADCPVSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMALRRLAASLGPTSLLPPLEGDSRSRSDVG 1584
+SAPCPRSSSCERCSA PGSRHFSEISSKGGDLSSNSSST+AAGLRRADS WH+GLVLGLLIGGLCYGRGGGG S V AKDGGEG SWFDDKPAFVACAAACSVVLSVAVVAWRRTGND IKSETV GCGRT GALS+FGR LR G+GGSAGRKEAFG G +GGE EPLLA GS D+ SSS SEPGER+DVEAGAG GADCPVSSRYLAACKGNTVAAK MWDET+KWR DTGAERSLSTPQPTL+IIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFS+LNDE DDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLP LLEHVDASQIPSEYGG+SPQALGESTDEMAL RLAASLGPTSL PP EG + SRSD G
Sbjct: 1 MSAPCPRSSSCERCSAFPGSRHFSEISSKGGDLSSNSSSTIAAGLRRADSGWHLGLVLGLLIGGLCYGRGGGGGSSVVAKDGGEGTSWFDDKPAFVACAAACSVVLSVAVVAWRRTGNDGAIKSETVVGCGRTTGALSVFGRRLRHGKGGSAGRKEAFGEGEDGGEEEPLLAGGSLDAPGPSSSASEPGERTDVEAGAGGGADCPVSSRYLAACKGNTVAAKAMWDETVKWRTDTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSKLNDEDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPTLLEHVDASQIPSEYGGDSPQALGESTDEMALCRLAASLGPTSLPPPPEGAAPSRSDAG 455
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A835YSU7_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU7_9STRA) HSP 1 Score: 221 bits (563), Expect = 5.120e-59 Identity = 116/264 (43.94%), Postives = 162/264 (61.36%), Query Frame = 1
Query: 835 VSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDD-----------------DAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIW-----------------KGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMALRRLAASL 1524
V RY+ A AAK W + +WR + + L+ PQP I+K+CYP+F+HGR++ G VV YE G+M FGRLA AGV+P D+Q HY F N++++ L+ GD D +LMTVLDV L ++T+KNNTV+ +Y+ A+AEVMQ HYP+RQ+RI+++NAPWWFAG W +GVLS+ T +KLQI G ++L AL + + QIPS+YGG+SP LG++ +E L LAA+L
Sbjct: 233 VPGRYVRAFGEANAAAK--WSASCEWRRERRVDEVLTVPQPVFTIMKECYPHFLHGRARDGGVVCYENPGRMDFGRLAAAGVTPDDLQRHYCFVNEYIWQRLS-PGDXXXXXXXXXXXXXXXXXXDDQLMTVLDVNGLGMSTLKNNTVMHRYMRASAEVMQAHYPDRQARIVIINAPWWFAGAWLDCIXXXXXXXXXXXXXHSFAGVLSANTTSKLQICGTDYLAALRKLIPDDQIPSDYGGSSPHKLGDADEERGLAELAAAL 493
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A4D9CRJ4_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRJ4_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.510e-41 Identity = 88/231 (38.10%), Postives = 135/231 (58.44%), Query Frame = 1
Query: 826 DCPVSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELN--DEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMALRRL 1512
D PV + +L A G+ V A+ + ++ WRA G + L P P IK+ YP++VHGR + GE+VV+EQ G+M G L G+ ++ HY +FN+F++ L EG+DD + MTVLD+G L L ++ + V + L T+ +M HYP R RI VVN P+ G W+ ++ VL Q K+++ + + LL+++ +PSE+GG SP LG+S +E LR L
Sbjct: 354 DRPVPATFLQAAGGDRVKAQAHYRASLAWRAREGVDGILRRPHPDFAAIKEHYPHYVHGRGRGGELVVFEQPGRMDLGALRKRGIGAAEIGRHYVYFNEFLYRALRREGEGEDDGRAMTVLDIGGLGLTSLTPD--VLEVLRTTSHLMHAHYPGRVLRICVVNVPFLVGGAWRLLASVLPQAVQEKIEVSAQPSVD-LLKYIAPENLPSEFGGTSPMGLGDSAEEKKLRAL 581
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A7R9U9K9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9K9_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.830e-39 Identity = 83/225 (36.89%), Postives = 131/225 (58.22%), Query Frame = 1
Query: 835 VSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEY--GGNSPQALGESTDEMAL 1503
V R+L A G+ A + T WR + +R LSTP+PT + +K+ +P+F+HGRS+KG VV YE+ G + GRLA +G+S D+ H F +++FS L D DAK++ V DV + + ++K + +L + +VMQ HYPER + ++NAP+WF W+ V +++ T+A+++I G NF L ++ + P EY GG P LG E++L
Sbjct: 127 VPERFLLAEGGDLERASQRFAATQLWREEHELDRVLSTPRPTFDKVKRLFPHFLHGRSRKGNVVRYERLGDIDAGRLAASGLSAVDLTNHLVFLAEYIFSHL-DAHRPDAKVLVVCDVKGISIGSLKGE--ILSFLQMSTQVMQAHYPERMESMFIINAPFWFTSAWRVVGVLMAPQTRARIKILGANFQDELAAYIPPNGAPFEYVDGGGLP--LGRDPQELSL 346
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A7S2V2B7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B7_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.030e-32 Identity = 75/228 (32.89%), Postives = 128/228 (56.14%), Query Frame = 1
Query: 829 CPVSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMALRRL 1512
CPV RYL +CKG+ A+ W+ T+KWR + G + L QP IK+ YP+F+H R ++G V Y++ G+++ +L GV ++ H+ F +++++ + E DD+ ++ V DV + +++ VV +++ +++ HY ER + ++NAP WFA I++ V+ +L T K+ I G + L + E + +P EYGG S LG S +E LR L
Sbjct: 161 CPVPLRYLKSCKGDVEEAQKRWNTTVKWRKENGVDDVLQKAQPHFHTIKKWYPHFIHSRDREGHPVYYDKLGEIKVEKLQQNGVDVEELLEHFIFHSEYLWKVV--EPDDNFLMVAVEDVQGINAFSLQG--VVFEFIKHVSKMFSDHYCERSYKTFIINAPGWFAWIFRVVAPLLDPKTTEKISILGTD-LTEMHEAIGIENVPKEYGGLSV-GLGYSEEEEELRCL 382
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A7S2AKR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKR7_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.790e-32 Identity = 75/225 (33.33%), Postives = 121/225 (53.78%), Query Frame = 1
Query: 832 PVSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQI-RGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMAL 1503
P+ +R+L A G+ V A W +T +WR + GAE +L P P ++K CYP+F HGR ++G +V YE G + RL AG++ H + +F++ +L +D ++ V+D+G + I N +++ + A HYPER +ILV+N P WF ++ V +L+ +AK+ I R +L+ +D IP+ YGG+SP LG E+ L
Sbjct: 128 PMPTRFLNAEAGDEVKATQRWLDTCRWREEHGAEEALDKPHPDFALLKNCYPHFYHGRDREGNIVYYECPGGLDIDRLKTAGITCEKFVDHVMYQQEFLWRKLQPSEED--RVTAVIDLGGVNSMFIFNKALIS-IVKACVVTTGAHYPERSYKILVLNVPNWFGTLFGFVKPLLNDVQKAKINIFRQHEVHSGMLKIIDDDNIPTAYGGSSPDELGNWEGELTL 349
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A7S3XUI5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUI5_HETAK) HSP 1 Score: 135 bits (341), Expect = 5.180e-32 Identity = 79/225 (35.11%), Postives = 123/225 (54.67%), Query Frame = 1
Query: 805 AGAGVGAD----CPVSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGK-NFLPALLEHVDASQIPSEYGGNS 1464
AGAG AD V ++++ C G+ V A+ WD T +WR + L PQP +IK+ YP+F G ++ G +V YEQ+GK+ AG + D+ HY F +F + L+ K ++VLD+ + LA + +++ +A ++Q+HYPE +LVVN P WFA +WK +++ T K++I G + L AL E +D QIP+EYGG +
Sbjct: 16 AGAGAEADRRGAAVVPAKFMNGCFGDAVEARRRWDITYRWRRKEEIDALLLKPQPFYHVIKKGYPHFYCGYARSGNLVYYEQSGKVDLSEAEAAGATLDDLVAHYTFLAEFCWRVLDPSAA--GKTVSVLDLAGISLAFCRGRAF--EFVKRSAALLQEHYPECCQVMLVVNVPSWFALVWKLAKPLVNEVTLKKIRIVGAADTLSALQEFIDDDQIPAEYGGTA 236
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A7S4KCE1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCE1_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.380e-31 Identity = 85/244 (34.84%), Postives = 117/244 (47.95%), Query Frame = 1
Query: 847 YLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSEL--------NDEGDDDAK---LMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMALRRLAASLGPTSLLP 1545
+L C G A MW ET +WR GA + +T + IKQ YP+F HG SK+G +VYE GKM L G DM Y +F +F+ S L G D + L V+D+ L+++ + V +Y+ +E+ HYP +R V+N+P+W AG W G+ G+L L + + L E +D QIP EYGG+SP LGE E L L TS LP
Sbjct: 283 FLEICNGKREKAGAMWAETRQWRVRDGAWKIHTTRHEWFQQIKQAYPHFAHGYSKQGYPIVYECPGKMNLKNLLRQGCGVEDMLFSYVYFMEFIQSVLCRLPELQSRRRGSPDPEGWGLTLVMDISGASLSSLSGDVV--RYMKRASEINSAHYPLSLNRAFVINSPFWLAGAWSGIRGILPESVHVDL-LSSSAYGDKLREWIDDDQIPPEYGGSSPYRLGEHPFERDLAALVEKGMSTSSLP 523
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A7S1UMG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UMG2_9STRA) HSP 1 Score: 137 bits (345), Expect = 7.360e-31 Identity = 83/246 (33.74%), Postives = 122/246 (49.59%), Query Frame = 1
Query: 826 DCP--VSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFS------EL-NDEGDDDAK-------LMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMALRRLA 1515
DC + + YL C GN A+ M+ +T WR + + TP P IK+ YP+F+HG SK G +VYEQ GKM G DM H F +++ + EL N GD+ + M V+D+ ++T+ + V YLA +V HYP R +VN+PWW AG + G +L + + ++ + AL + +D +QIP EYGG+S ALGE E+ L+ LA
Sbjct: 364 DCEARIPANYLKLCSGNENKARAMYQKTQAWRQENAIWKVHRTPHPFYHQIKKAYPHFIHGHSKCGMTIVYEQPGKMSLKEFFRNGGGVPDMVRHCWFLMEYIANCVSTRKELVNARGDEPGEPLSANWGTMIVMDISGASVSTLSGD--VLAYLAKAGDVNNNHYPMAMKRAFLVNSPWWLAGAFSGFRSILPESVKVDILSESQS-VTALRKFIDDNQIPKEYGGSSQYALGEHPYEVGLKDLA 606
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A3R6YTQ5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YTQ5_9STRA) HSP 1 Score: 133 bits (334), Expect = 2.440e-29 Identity = 81/243 (33.33%), Postives = 127/243 (52.26%), Query Frame = 1
Query: 817 VGADCPVSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFG--RLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQI-RG-KNFLPALLEHVDASQIPSEYGGNSP---QALGESTDEMALRRLAASL 1524
+G D V R++ AC+G+ AK + + ++WR D + L P P I K+ YP H R K G +V YE G M+ G GV D+ H F+N+F+++ L+ D ++ V+D+ + ++ + V ++ A + V + +YPER +I +VN P WF +WK VS +++ T+ K+ + RG K ALLE++DAS +P YGG L S DE+ LR A L
Sbjct: 428 LGKDVQVDPRFIEACRGDMDEAKRKYAKYLQWRQDNDIDHLLLRPHPHFTI-KESYPQTTHKRDKFGHLVAYELAGNMRKGMQHFLSRGVVEDDVIAHLGFYNEFLWTVLDRRPYPDGVMLKVIDMQGVSMSDFGGDVV--NFMKACSSVGEAYYPERLFKIFIVNPPSWFNMVWKAVSPLVNPKTRDKIHVVRGQKEIQKALLEYIDASNLPDVYGGTCSCPGGCLANSDDEIVLREYVAKL 667 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13029.2486.1 >prot_Ecto-sp13_S_contig13029.2486.1 ID=prot_Ecto-sp13_S_contig13029.2486.1|Name=mRNA_Ecto-sp13_S_contig13029.2486.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=528bp QAFAGFLAGRTAGRVLGPAAASRFSLGVVVAVGVIGVAITQAWLGLAGVTback to top mRNA from alignment at Ecto-sp13_S_contig13029:783..4858+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13029.2486.1 ID=mRNA_Ecto-sp13_S_contig13029.2486.1|Name=mRNA_Ecto-sp13_S_contig13029.2486.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4076bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13029:783..4858+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13029:783..4858+ >mRNA_Ecto-sp13_S_contig13029.2486.1 ID=mRNA_Ecto-sp13_S_contig13029.2486.1|Name=mRNA_Ecto-sp13_S_contig13029.2486.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1584bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13029:783..4858+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |