mRNA_Ecto-sp13_S_contig13029.2486.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13029.2486.1
Unique NamemRNA_Ecto-sp13_S_contig13029.2486.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: D7FZM4_ECTSI (CRAL-TRIO domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FZM4_ECTSI)

HSP 1 Score: 795 bits (2053), Expect = 5.640e-279
Identity = 410/455 (90.11%), Postives = 423/455 (92.97%), Query Frame = 1
Query:  223 LSAPCPRSSSCERCSALPGSRHFSEISSKGGDLSSNSSSTVAAGLRRADSRWHVGLVLGLLIGGLCYGRGGGGDSGVAAKDGGEGASWFDDKPAFVACAAACSVVLSVAVVAWRRTGNDDVIKSETVAGCGRTAGALSIFGRCLRRGRGGSAGRKEAFGGGGEGGEGEPLLAAGSPDSR-TSSSLSEPGERSDVEAGAGVGADCPVSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMALRRLAASLGPTSLLPPLEGDSRSRSDVG 1584
            +SAPCPRSSSCERCSA PGSRHFSEISSKGGDLSSNSSST+AAGLRRADS WH+GLVLGLLIGGLCYGRGGGG S V AKDGGEG SWFDDKPAFVACAAACSVVLSVAVVAWRRTGND  IKSETV GCGRT GALS+FGR LR G+GGSAGRKEAFG G +GGE EPLLA GS D+   SSS SEPGER+DVEAGAG GADCPVSSRYLAACKGNTVAAK MWDET+KWR DTGAERSLSTPQPTL+IIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFS+LNDE DDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLP LLEHVDASQIPSEYGG+SPQALGESTDEMAL RLAASLGPTSL PP EG + SRSD G
Sbjct:    1 MSAPCPRSSSCERCSAFPGSRHFSEISSKGGDLSSNSSSTIAAGLRRADSGWHLGLVLGLLIGGLCYGRGGGGGSSVVAKDGGEGTSWFDDKPAFVACAAACSVVLSVAVVAWRRTGNDGAIKSETVVGCGRTTGALSVFGRRLRHGKGGSAGRKEAFGEGEDGGEEEPLLAGGSLDAPGPSSSASEPGERTDVEAGAGGGADCPVSSRYLAACKGNTVAAKAMWDETVKWRTDTGAERSLSTPQPTLDIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSKLNDEDDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPTLLEHVDASQIPSEYGGDSPQALGESTDEMALCRLAASLGPTSLPPPPEGAAPSRSDAG 455          
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A835YSU7_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU7_9STRA)

HSP 1 Score: 221 bits (563), Expect = 5.120e-59
Identity = 116/264 (43.94%), Postives = 162/264 (61.36%), Query Frame = 1
Query:  835 VSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDD-----------------DAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIW-----------------KGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMALRRLAASL 1524
            V  RY+ A      AAK  W  + +WR +   +  L+ PQP   I+K+CYP+F+HGR++ G VV YE  G+M FGRLA AGV+P D+Q HY F N++++  L+  GD                  D +LMTVLDV  L ++T+KNNTV+ +Y+ A+AEVMQ HYP+RQ+RI+++NAPWWFAG W                    +GVLS+ T +KLQI G ++L AL + +   QIPS+YGG+SP  LG++ +E  L  LAA+L
Sbjct:  233 VPGRYVRAFGEANAAAK--WSASCEWRRERRVDEVLTVPQPVFTIMKECYPHFLHGRARDGGVVCYENPGRMDFGRLAAAGVTPDDLQRHYCFVNEYIWQRLS-PGDXXXXXXXXXXXXXXXXXXDDQLMTVLDVNGLGMSTLKNNTVMHRYMRASAEVMQAHYPDRQARIVIINAPWWFAGAWLDCIXXXXXXXXXXXXXHSFAGVLSANTTSKLQICGTDYLAALRKLIPDDQIPSDYGGSSPHKLGDADEERGLAELAAAL 493          
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A4D9CRJ4_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRJ4_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.510e-41
Identity = 88/231 (38.10%), Postives = 135/231 (58.44%), Query Frame = 1
Query:  826 DCPVSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELN--DEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMALRRL 1512
            D PV + +L A  G+ V A+  +  ++ WRA  G +  L  P P    IK+ YP++VHGR + GE+VV+EQ G+M  G L   G+   ++  HY +FN+F++  L    EG+DD + MTVLD+G L L ++  +  V + L  T+ +M  HYP R  RI VVN P+   G W+ ++ VL    Q K+++  +  +  LL+++    +PSE+GG SP  LG+S +E  LR L
Sbjct:  354 DRPVPATFLQAAGGDRVKAQAHYRASLAWRAREGVDGILRRPHPDFAAIKEHYPHYVHGRGRGGELVVFEQPGRMDLGALRKRGIGAAEIGRHYVYFNEFLYRALRREGEGEDDGRAMTVLDIGGLGLTSLTPD--VLEVLRTTSHLMHAHYPGRVLRICVVNVPFLVGGAWRLLASVLPQAVQEKIEVSAQPSVD-LLKYIAPENLPSEFGGTSPMGLGDSAEEKKLRAL 581          
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A7R9U9K9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9K9_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.830e-39
Identity = 83/225 (36.89%), Postives = 131/225 (58.22%), Query Frame = 1
Query:  835 VSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEY--GGNSPQALGESTDEMAL 1503
            V  R+L A  G+   A   +  T  WR +   +R LSTP+PT + +K+ +P+F+HGRS+KG VV YE+ G +  GRLA +G+S  D+  H  F  +++FS L D    DAK++ V DV  + + ++K    +  +L  + +VMQ HYPER   + ++NAP+WF   W+ V  +++  T+A+++I G NF   L  ++  +  P EY  GG  P  LG    E++L
Sbjct:  127 VPERFLLAEGGDLERASQRFAATQLWREEHELDRVLSTPRPTFDKVKRLFPHFLHGRSRKGNVVRYERLGDIDAGRLAASGLSAVDLTNHLVFLAEYIFSHL-DAHRPDAKVLVVCDVKGISIGSLKGE--ILSFLQMSTQVMQAHYPERMESMFIINAPFWFTSAWRVVGVLMAPQTRARIKILGANFQDELAAYIPPNGAPFEYVDGGGLP--LGRDPQELSL 346          
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A7S2V2B7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B7_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.030e-32
Identity = 75/228 (32.89%), Postives = 128/228 (56.14%), Query Frame = 1
Query:  829 CPVSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMALRRL 1512
            CPV  RYL +CKG+   A+  W+ T+KWR + G +  L   QP    IK+ YP+F+H R ++G  V Y++ G+++  +L   GV   ++  H+ F +++++  +  E DD+  ++ V DV  +   +++   VV +++   +++   HY ER  +  ++NAP WFA I++ V+ +L   T  K+ I G + L  + E +    +P EYGG S   LG S +E  LR L
Sbjct:  161 CPVPLRYLKSCKGDVEEAQKRWNTTVKWRKENGVDDVLQKAQPHFHTIKKWYPHFIHSRDREGHPVYYDKLGEIKVEKLQQNGVDVEELLEHFIFHSEYLWKVV--EPDDNFLMVAVEDVQGINAFSLQG--VVFEFIKHVSKMFSDHYCERSYKTFIINAPGWFAWIFRVVAPLLDPKTTEKISILGTD-LTEMHEAIGIENVPKEYGGLSV-GLGYSEEEEELRCL 382          
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A7S2AKR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKR7_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.790e-32
Identity = 75/225 (33.33%), Postives = 121/225 (53.78%), Query Frame = 1
Query:  832 PVSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQI-RGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMAL 1503
            P+ +R+L A  G+ V A   W +T +WR + GAE +L  P P   ++K CYP+F HGR ++G +V YE  G +   RL  AG++      H  +  +F++ +L    +D  ++  V+D+G +    I N  +++  + A       HYPER  +ILV+N P WF  ++  V  +L+   +AK+ I R       +L+ +D   IP+ YGG+SP  LG    E+ L
Sbjct:  128 PMPTRFLNAEAGDEVKATQRWLDTCRWREEHGAEEALDKPHPDFALLKNCYPHFYHGRDREGNIVYYECPGGLDIDRLKTAGITCEKFVDHVMYQQEFLWRKLQPSEED--RVTAVIDLGGVNSMFIFNKALIS-IVKACVVTTGAHYPERSYKILVLNVPNWFGTLFGFVKPLLNDVQKAKINIFRQHEVHSGMLKIIDDDNIPTAYGGSSPDELGNWEGELTL 349          
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A7S3XUI5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUI5_HETAK)

HSP 1 Score: 135 bits (341), Expect = 5.180e-32
Identity = 79/225 (35.11%), Postives = 123/225 (54.67%), Query Frame = 1
Query:  805 AGAGVGAD----CPVSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGK-NFLPALLEHVDASQIPSEYGGNS 1464
            AGAG  AD      V ++++  C G+ V A+  WD T +WR     +  L  PQP   +IK+ YP+F  G ++ G +V YEQ+GK+       AG +  D+  HY F  +F +  L+       K ++VLD+  + LA  +      +++  +A ++Q+HYPE    +LVVN P WFA +WK    +++  T  K++I G  + L AL E +D  QIP+EYGG +
Sbjct:   16 AGAGAEADRRGAAVVPAKFMNGCFGDAVEARRRWDITYRWRRKEEIDALLLKPQPFYHVIKKGYPHFYCGYARSGNLVYYEQSGKVDLSEAEAAGATLDDLVAHYTFLAEFCWRVLDPSAA--GKTVSVLDLAGISLAFCRGRAF--EFVKRSAALLQEHYPECCQVMLVVNVPSWFALVWKLAKPLVNEVTLKKIRIVGAADTLSALQEFIDDDQIPAEYGGTA 236          
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A7S4KCE1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCE1_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.380e-31
Identity = 85/244 (34.84%), Postives = 117/244 (47.95%), Query Frame = 1
Query:  847 YLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFSEL--------NDEGDDDAK---LMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMALRRLAASLGPTSLLP 1545
            +L  C G    A  MW ET +WR   GA +  +T     + IKQ YP+F HG SK+G  +VYE  GKM    L   G    DM   Y +F +F+ S L           G  D +   L  V+D+    L+++  + V  +Y+   +E+   HYP   +R  V+N+P+W AG W G+ G+L       L +    +   L E +D  QIP EYGG+SP  LGE   E  L  L      TS LP
Sbjct:  283 FLEICNGKREKAGAMWAETRQWRVRDGAWKIHTTRHEWFQQIKQAYPHFAHGYSKQGYPIVYECPGKMNLKNLLRQGCGVEDMLFSYVYFMEFIQSVLCRLPELQSRRRGSPDPEGWGLTLVMDISGASLSSLSGDVV--RYMKRASEINSAHYPLSLNRAFVINSPFWLAGAWSGIRGILPESVHVDL-LSSSAYGDKLREWIDDDQIPPEYGGSSPYRLGEHPFERDLAALVEKGMSTSSLP 523          
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A7S1UMG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UMG2_9STRA)

HSP 1 Score: 137 bits (345), Expect = 7.360e-31
Identity = 83/246 (33.74%), Postives = 122/246 (49.59%), Query Frame = 1
Query:  826 DCP--VSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFGRLADAGVSPFDMQMHYAFFNDFVFS------EL-NDEGDDDAK-------LMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMALRRLA 1515
            DC   + + YL  C GN   A+ M+ +T  WR +    +   TP P    IK+ YP+F+HG SK G  +VYEQ GKM        G    DM  H  F  +++ +      EL N  GD+  +        M V+D+    ++T+  +  V  YLA   +V   HYP    R  +VN+PWW AG + G   +L    +  +    ++ + AL + +D +QIP EYGG+S  ALGE   E+ L+ LA
Sbjct:  364 DCEARIPANYLKLCSGNENKARAMYQKTQAWRQENAIWKVHRTPHPFYHQIKKAYPHFIHGHSKCGMTIVYEQPGKMSLKEFFRNGGGVPDMVRHCWFLMEYIANCVSTRKELVNARGDEPGEPLSANWGTMIVMDISGASVSTLSGD--VLAYLAKAGDVNNNHYPMAMKRAFLVNSPWWLAGAFSGFRSILPESVKVDILSESQS-VTALRKFIDDNQIPKEYGGSSQYALGEHPYEVGLKDLA 606          
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Match: A0A3R6YTQ5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YTQ5_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.440e-29
Identity = 81/243 (33.33%), Postives = 127/243 (52.26%), Query Frame = 1
Query:  817 VGADCPVSSRYLAACKGNTVAAKTMWDETIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKMQFG--RLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELRLATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSGVLSSGTQAKLQI-RG-KNFLPALLEHVDASQIPSEYGGNSP---QALGESTDEMALRRLAASL 1524
            +G D  V  R++ AC+G+   AK  + + ++WR D   +  L  P P   I K+ YP   H R K G +V YE  G M+ G       GV   D+  H  F+N+F+++ L+     D  ++ V+D+  + ++    + V   ++ A + V + +YPER  +I +VN P WF  +WK VS +++  T+ K+ + RG K    ALLE++DAS +P  YGG        L  S DE+ LR   A L
Sbjct:  428 LGKDVQVDPRFIEACRGDMDEAKRKYAKYLQWRQDNDIDHLLLRPHPHFTI-KESYPQTTHKRDKFGHLVAYELAGNMRKGMQHFLSRGVVEDDVIAHLGFYNEFLWTVLDRRPYPDGVMLKVIDMQGVSMSDFGGDVV--NFMKACSSVGEAYYPERLFKIFIVNPPSWFNMVWKAVSPLVNPKTRDKIHVVRGQKEIQKALLEYIDASNLPDVYGGTCSCPGGCLANSDDEIVLREYVAKL 667          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13029.2486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZM4_ECTSI5.640e-27990.11CRAL-TRIO domain-containing protein n=3 Tax=Ectoca... [more]
A0A835YSU7_9STRA5.120e-5943.94CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
A0A4D9CRJ4_9STRA1.510e-4138.10CRAL-TRIO domain-containing protein n=1 Tax=Nannoc... [more]
A0A7R9U9K9_9STRA2.830e-3936.89Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2V2B7_9STRA2.030e-3232.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2AKR7_9STRA2.790e-3233.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3XUI5_HETAK5.180e-3235.11Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S4KCE1_9STRA1.380e-3134.84Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1UMG2_9STRA7.360e-3133.74Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A3R6YTQ5_9STRA2.440e-2933.33Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13029contigEcto-sp13_S_contig13029:783..4858 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score797.7
Seed ortholog evalue3.2e-228
Seed eggNOG ortholog2880.D7FZM4
Model size1584
Hectar predicted targeting categorysignal peptide
Exons7
EggNOG free text desc.macromolecule localization
EggNOG OGsKOG1471@1,KOG1471@2759
Ec32 ortholog descriptionCRAL-TRIO domain
Ec32 orthologEc-17_003760.1
Cds size1584
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13029.2486.1prot_Ecto-sp13_S_contig13029.2486.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13029 783..4858 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462698.1593835-CDS-Ecto-sp13_S_contig13029:782..9411681462698.1593835-CDS-Ecto-sp13_S_contig13029:782..941Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13029 783..941 +
1681462698.175204-CDS-Ecto-sp13_S_contig13029:1112..17981681462698.175204-CDS-Ecto-sp13_S_contig13029:1112..1798Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13029 1113..1798 +
1681462698.1885586-CDS-Ecto-sp13_S_contig13029:2234..22971681462698.1885586-CDS-Ecto-sp13_S_contig13029:2234..2297Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13029 2235..2297 +
1681462698.1983669-CDS-Ecto-sp13_S_contig13029:2505..26951681462698.1983669-CDS-Ecto-sp13_S_contig13029:2505..2695Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13029 2506..2695 +
1681462698.2078836-CDS-Ecto-sp13_S_contig13029:3220..33571681462698.2078836-CDS-Ecto-sp13_S_contig13029:3220..3357Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13029 3221..3357 +
1681462698.2172327-CDS-Ecto-sp13_S_contig13029:3925..41271681462698.2172327-CDS-Ecto-sp13_S_contig13029:3925..4127Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13029 3926..4127 +
1681462698.2272465-CDS-Ecto-sp13_S_contig13029:4711..48581681462698.2272465-CDS-Ecto-sp13_S_contig13029:4711..4858Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13029 4712..4858 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13029.2486.1

>prot_Ecto-sp13_S_contig13029.2486.1 ID=prot_Ecto-sp13_S_contig13029.2486.1|Name=mRNA_Ecto-sp13_S_contig13029.2486.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=528bp
QAFAGFLAGRTAGRVLGPAAASRFSLGVVVAVGVIGVAITQAWLGLAGVT
KTRFFWARTLGGILTGALCSGALSLSAPCPRSSSCERCSALPGSRHFSEI
SSKGGDLSSNSSSTVAAGLRRADSRWHVGLVLGLLIGGLCYGRGGGGDSG
VAAKDGGEGASWFDDKPAFVACAAACSVVLSVAVVAWRRTGNDDVIKSET
VAGCGRTAGALSIFGRCLRRGRGGSAGRKEAFGGGGEGGEGEPLLAAGSP
DSRTSSSLSEPGERSDVEAGAGVGADCPVSSRYLAACKGNTVAAKTMWDE
TIKWRADTGAERSLSTPQPTLEIIKQCYPYFVHGRSKKGEVVVYEQTGKM
QFGRLADAGVSPFDMQMHYAFFNDFVFSELNDEGDDDAKLMTVLDVGELR
LATIKNNTVVTKYLAATAEVMQKHYPERQSRILVVNAPWWFAGIWKGVSG
VLSSGTQAKLQIRGKNFLPALLEHVDASQIPSEYGGNSPQALGESTDEMA
LRRLAASLGPTSLLPPLEGDSRSRSDVG
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mRNA from alignment at Ecto-sp13_S_contig13029:783..4858+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13029.2486.1 ID=mRNA_Ecto-sp13_S_contig13029.2486.1|Name=mRNA_Ecto-sp13_S_contig13029.2486.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4076bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13029:783..4858+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCGTTTGCCGGGTTCCTGGCGGGCAGGACCGCCGGCAGAGTGCTCGG CCCGGCCGCGGCTTCTCGGTTCAGCCTGGGGGTCGTGGTTGCGGTCGGCG TGATCGGCGTGGCCATCACCCAGGCGTGGCTTGGGCTGGCCGGCGTAACG AAAACGAGGGTAAGACACAGCCAGCGCATAAGCCGATCGAGGAGAAGGAT CGTGTCCCATCAACAGTTGCTGGAAGAAGCGGACGGTGATGGCCCAAAGG CTATGTAGACAGCAGCACGTCTTGGTGGAAATAATGTTTACTTGCGCCGC CTCCCCCCCGCCCCTGCCCTCCATCCTCAGTTCTTTTGGGCGCGAACACT AGGTGGGATCCTCACTGGAGCCCTCTGCAGCGGCGCGCTGTCCCTGTCGG CGCCTTGCCCCCGCTCCTCCTCATGCGAGCGGTGCAGCGCTCTCCCGGGA TCGAGACATTTCTCGGAAATTTCCTCCAAGGGGGGGGACCTGAGCAGCAA CTCTTCCAGCACCGTCGCCGCCGGCCTCAGGCGCGCGGACTCCCGGTGGC ACGTGGGCCTGGTGCTCGGCCTCCTGATCGGCGGCCTGTGCTACGGCCGG GGAGGGGGGGGGGACTCCGGCGTGGCGGCGAAGGACGGGGGGGAGGGGGC GTCGTGGTTCGACGACAAGCCCGCGTTCGTGGCGTGCGCTGCCGCCTGCT CGGTGGTGCTGTCCGTCGCCGTGGTGGCCTGGCGGCGCACCGGCAACGAC GACGTAATCAAAAGTGAAACCGTCGCCGGGTGCGGCCGAACAGCCGGGGC CCTGAGCATCTTCGGCCGCTGCCTCCGGCGTGGTAGGGGGGGTTCCGCAG GGCGAAAAGAGGCTTTTGGGGGGGGGGGGGAGGGGGGGGAGGGGGAACCC TTGCTGGCTGCCGGGTCTCCTGACTCTCGGACATCGTCGTCGTTGTCTGA GCCGGGCGAGAGAAGTGATGTGGAGGCAGGGGCGGGCGTTGGCGCTGATT GCCCCGTGTCGTCGAGGTGAGATGAGGGAAGGGCGTGTGAGTGGGAAGGG TGGGTAGGGTGTGTTTACCTTTTATTGCTCTGGGTCTGGAGTCTTTTCTC GTGTCAGCAGTTGGAACTCATGCCGTTCTTGCCACGCGCCTGCGCCCATT TTCCTCGGCGCCTGCAACTGCAGCATTGGCATCAGATTCACTGAAACTGC TGCTACTTTTGGACACGACCGGGTAGATGGGAGATTGGAGGGAGCCTGGA TATCAGGGAGAACGTCGAACCGCTCTCACGCCCATGAGAAGAAGCGATTT CAGCGTGCGTGAGTCCGCCATCTTGTTCATTCTTCTAGTCTAGTGTTTTC TGGTGACATGTGACGTGTGGCCACACCAACATGCTTGTGACCCAGTATCA CCACCGTGTGTTTTCGTTGATTTCCTCCTATTTTCCGGATTTTTGGCACA AGGTATCTGGCCGCCTGCAAGGGAAACACGGTCGCCGCGAAGACGATGTG GGACGAAACCATCAAGTGAGGCAGTCAACTTTGTGTTTGTCTTTGACTCA CACGCTCGCAAGCGGCACCTCGTTCGCAAGGGTCCTACTTCTTTCTTGGA TAGCTGACTAGCAGCGCGGCGATAGTTGCGGTAGCCATCTGCAACAGTAG GTACGAGTCCGCGGACACGTCCCTGTTCTTTTGTCTCAGCTCGTGCATTT GTTTGCCCCGCTGCTTGTCGAAGATGGCGAGCGGACACAGGAGCCGAGCG GTCGCTTTCCACCCCCCAGCCGACCCTGGAGATCATCAAGCAGTGCTACC CTTACTTCGTGCACGGCCGTTCCAAGAAGGGCGAAGTAGTGGTCTACGAG CAAACGGGGAAGATGCAGTTCGGCCGCCTCGCGGATGCCGGCGTTTCCCC GTTCGATATGCAGGTTGGGGTTTATTTCATGGGCAGGGGGGGGGGGAGGG GTTGTTGGCCAAGGCCGCGTGTTTTGTGTGTTGGGCACCTTAGAAAATGA TGGTGTTGCCGAGGCGAGTTCGATGTACGTCGCGTCAAAAGCAAAAAGCA GTTGGCTTGGACGCATGCGGCGGTATCGTGCGAGCGCGTTGCTCCCTCGG AGGTGGGGCCGGCCTTCTAATTCGCGTCTTATCGCTCGTTTTACCCCGAA TCCTACAGAGAGCCAAGTACACGCTTTATGGCGGCTTAGCACATCTCGTG TATACACGTCTTTAACTGTCGGGTGTCCGCCTGTCGTCTCGCTCATTGCT GCGACGCTATCCTTACTCTACGCTCCACTCAACGCCAGAGCAGCGCGAGT CGCGTACGGTGACCTACGCTCGACTCAAAGCTACAGCAGCGTGAGTCGCG TGTGCTGCATCCCCCGTCCCCCACCCGGTGCTCCCGTGGTCTGTTCTGTT TGTCTGTCGCCCTTCGTTTTCCTATCCGACGCCGTCAGATGCACTACGCG TTCTTCAACGACTTCGTGTTCAGTGAGCTCAACGACGAGGGCGACGATGA TGCCAAGCTCATGACCGTACTCGACGTCGGGGAGCTCCGGCTGGCGACCA TCAAGAACAACACGGTCGTTACAAAGTGAGCCTAAAACAGTTTACCACAC TTTCCGGAAATGTAGGGACCAGGGAAAATCACATCAGTATACAAACGGGC CTTCCCCAGATGGACGGATCTGCTGAGCTCGGTTACGCCCTCGCTGGCTC AGACGTCATGGAGCGTTTGTTTGGTCTTTGGAAATTGCTTTCTTGAGGTG CTACCAAAGGGTATATGCCCGGCGGACGTACTATCGCCGGGCGAAAGCGG CGGGCGTTTACCTGCCTATCATCCGATATACATTGGTTCTCTTTGTGCTA CGTTGATTTGGTCCCAAAAGCTATTTCGTCGGCGCAACCTTGGCGTGCTT ATTTCCTGCCCGGTGCTGCAGCGACCACGGCAGGGTCGCTAGCATTACAT CAATGGCCTTGCATGATGCCGGCAACTACGCTCCCCTCCCACGCGCCGTA TCCGATATCCACTTCAGGACCCCCCCCCCAATAGTCTCACAACTAAGGCA GGCACAAAATTTACCCCCACCCCACCCCACTCTGCGTGCCCCCCCCTTTC CCCCCCCCCCCCCCCCCCTGCGGGCCCCCCCCCCCCCCGCCAGGTACCTC GCCGCCACGGCGGAGGTGATGCAGAAGCACTACCCCGAGCGCCAGAGCCG CATCCTGGTGGTAAACGCCCCGTGGTGGTTCGCGGGCATCTGGAAGGGGG TGTCCGGGGTCCTGTCTTCGGGGACGCAGGCGAAGCTGCAGATCAGGGGG AAGAACTTCTTGCCGGCGCTCCTGGAACACGTGGACGCTTCACAGGTGTT TGTGTGTTTGTGGCGGACGTGATTTTGCGGAACGAAGCAGTACCGTGGGA TAGCATCTGATACCGGTACGGGTTTGGAGAGCCGTGTTGGTTGTTTTGGG GTTTGGCTCTTCGGTTTGGGGCTTGCTCTGTGTAAGGGCGATTGGTAGTG CCTTGTGAACCCGGAAGAAAGTGCGTGACTCTGGCTGTGAAGAGTTGGGA AAGCGATGCTCTGGATAGAGGGAGCAACAGCAGCAGCAGCAAGAACGAGC GGACACACTGTTTTGGTTGTGATAATTTCTGTGCAGGCATGTATTTCCAT GTGTTATTTACAATTGTCTTCGGACTACTGGTATAAGTAGTATGAATACT GTGACCACCAAACGTTTCAAGCCCAAGCGCGCTGCCTCCTTGGCGTGAGG ATCACCCCCCGCATGTTGGAGTTGATTTAGCATTGTAAGGCAGAACGGCT CACAAGGATGTTCGATCAGCCTGTTGCCCGCAAGACAAGACGGGCTTTGA AGGCTAGGCTTTTGGAAACACTCCTCACTGTTGTGCGAAACTGCTCTGCG TCTGTCTGTCTTCCCCCCCTTTGTGCCAGATCCCCTCGGAATACGGCGGT AATAGCCCACAAGCCCTGGGAGAGTCCACGGATGAGATGGCCTTGCGGAG ACTGGCAGCTAGCTTGGGTCCGACGTCCTTGCTGCCGCCGCTAGAAGGGG ATTCACGCTCCCGGTCCGATGTCGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13029:783..4858+

>mRNA_Ecto-sp13_S_contig13029.2486.1 ID=mRNA_Ecto-sp13_S_contig13029.2486.1|Name=mRNA_Ecto-sp13_S_contig13029.2486.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1584bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13029:783..4858+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCGTTTGCCGGGTTCCTGGCGGGCAGGACCGCCGGCAGAGTGCTCGG
CCCGGCCGCGGCTTCTCGGTTCAGCCTGGGGGTCGTGGTTGCGGTCGGCG
TGATCGGCGTGGCCATCACCCAGGCGTGGCTTGGGCTGGCCGGCGTAACG
AAAACGAGGTTCTTTTGGGCGCGAACACTAGGTGGGATCCTCACTGGAGC
CCTCTGCAGCGGCGCGCTGTCCCTGTCGGCGCCTTGCCCCCGCTCCTCCT
CATGCGAGCGGTGCAGCGCTCTCCCGGGATCGAGACATTTCTCGGAAATT
TCCTCCAAGGGGGGGGACCTGAGCAGCAACTCTTCCAGCACCGTCGCCGC
CGGCCTCAGGCGCGCGGACTCCCGGTGGCACGTGGGCCTGGTGCTCGGCC
TCCTGATCGGCGGCCTGTGCTACGGCCGGGGAGGGGGGGGGGACTCCGGC
GTGGCGGCGAAGGACGGGGGGGAGGGGGCGTCGTGGTTCGACGACAAGCC
CGCGTTCGTGGCGTGCGCTGCCGCCTGCTCGGTGGTGCTGTCCGTCGCCG
TGGTGGCCTGGCGGCGCACCGGCAACGACGACGTAATCAAAAGTGAAACC
GTCGCCGGGTGCGGCCGAACAGCCGGGGCCCTGAGCATCTTCGGCCGCTG
CCTCCGGCGTGGTAGGGGGGGTTCCGCAGGGCGAAAAGAGGCTTTTGGGG
GGGGGGGGGAGGGGGGGGAGGGGGAACCCTTGCTGGCTGCCGGGTCTCCT
GACTCTCGGACATCGTCGTCGTTGTCTGAGCCGGGCGAGAGAAGTGATGT
GGAGGCAGGGGCGGGCGTTGGCGCTGATTGCCCCGTGTCGTCGAGGTATC
TGGCCGCCTGCAAGGGAAACACGGTCGCCGCGAAGACGATGTGGGACGAA
ACCATCAAATGGCGAGCGGACACAGGAGCCGAGCGGTCGCTTTCCACCCC
CCAGCCGACCCTGGAGATCATCAAGCAGTGCTACCCTTACTTCGTGCACG
GCCGTTCCAAGAAGGGCGAAGTAGTGGTCTACGAGCAAACGGGGAAGATG
CAGTTCGGCCGCCTCGCGGATGCCGGCGTTTCCCCGTTCGATATGCAGAT
GCACTACGCGTTCTTCAACGACTTCGTGTTCAGTGAGCTCAACGACGAGG
GCGACGATGATGCCAAGCTCATGACCGTACTCGACGTCGGGGAGCTCCGG
CTGGCGACCATCAAGAACAACACGGTCGTTACAAAGTACCTCGCCGCCAC
GGCGGAGGTGATGCAGAAGCACTACCCCGAGCGCCAGAGCCGCATCCTGG
TGGTAAACGCCCCGTGGTGGTTCGCGGGCATCTGGAAGGGGGTGTCCGGG
GTCCTGTCTTCGGGGACGCAGGCGAAGCTGCAGATCAGGGGGAAGAACTT
CTTGCCGGCGCTCCTGGAACACGTGGACGCTTCACAGATCCCCTCGGAAT
ACGGCGGTAATAGCCCACAAGCCCTGGGAGAGTCCACGGATGAGATGGCC
TTGCGGAGACTGGCAGCTAGCTTGGGTCCGACGTCCTTGCTGCCGCCGCT
AGAAGGGGATTCACGCTCCCGGTCCGATGTCGGC
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