prot_Ecto-sp13_S_contig13024.2484.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13024.2484.1 vs. uniprot
Match: A0A6H5K9V8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9V8_9PHAE) HSP 1 Score: 162 bits (411), Expect = 7.070e-48 Identity = 106/159 (66.67%), Postives = 106/159 (66.67%), Query Frame = 0
Query: 1 QLFHRFERYQVDVKVDLNVALRELENIRDMIQECGGAALDDRFVFTRFVNALPQECEVAKENLSSAAKLTRGDLMR-----------------------------------GESRNRARRKGNXXXXXXXXXSGGGVAEKRARVRCFRCGKMGHRIAEC 124
QLFHRFERYQVDV VD NVALRELENIRDMIQECGGAALDDRFVFTRFVNALPQE EVAKENLSSA KLTRGDLMR ESRNR XXXXXXXXX AEKRA VRCFRCGK GHRIAEC
Sbjct: 37 QLFHRFERYQVDVMVDPNVALRELENIRDMIQECGGAALDDRFVFTRFVNALPQEYEVAKENLSSAEKLTRGDLMRVTGTRYNTLCSQREAEKSHTRAAEQAFFTADGAGKDESRNRXXXXXXXXXXXXXXXXXXXGAEKRACVRCFRCGKRGHRIAEC 195
BLAST of mRNA_Ecto-sp13_S_contig13024.2484.1 vs. uniprot
Match: A0A6H5JXF6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF6_9PHAE) HSP 1 Score: 156 bits (394), Expect = 6.230e-44 Identity = 94/158 (59.49%), Postives = 99/158 (62.66%), Query Frame = 0
Query: 2 LFHRFERYQVDVKVDLNVALRELENIRDMIQECGGAALDDRFVFTRFVNALPQECEVAKENLSSAAKLTRGDLMR--GESRN-----RARRKGNXXXXXXXXXSGGGVA----------------------------EKRARVRCFRCGKMGHRIAEC 124
+FHRFERYQVDVKVD NVALRELENIRDMIQECGGAALDDRFVFTRFVNALPQE EVAK NLSSA +LTRG+LMR G N R K + + G EKRARVRCFRCGKMGHRIAEC
Sbjct: 99 VFHRFERYQVDVKVDPNVALRELENIRDMIQECGGAALDDRFVFTRFVNALPQEYEVAKVNLSSAERLTRGNLMRVTGTRYNTLCSQREAEKSHTRAEEQAFVTADGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRARVRCFRCGKMGHRIAEC 256
BLAST of mRNA_Ecto-sp13_S_contig13024.2484.1 vs. uniprot
Match: A0A6H5KFR9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR9_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 2.410e-13 Identity = 41/74 (55.41%), Postives = 45/74 (60.81%), Query Frame = 0
Query: 51 ALPQECEVAKENLSSAAKLTRGDLMRGESRNRARRKGNXXXXXXXXXSGGGVAEKRARVRCFRCGKMGHRIAEC 124
A QE E + + A + +GES NRA RKGN SGGG AEKRARVRCFRCGKMGHRIAEC
Sbjct: 97 ASQQEVEKSHTRAAEQAFIPADGAGKGESPNRALRKGNSDGKGNGDESGGGGAEKRARVRCFRCGKMGHRIAEC 170
BLAST of mRNA_Ecto-sp13_S_contig13024.2484.1 vs. uniprot
Match: A0A6H5J624_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J624_9PHAE) HSP 1 Score: 55.8 bits (133), Expect = 1.370e-6 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 0
Query: 1 QLFHRFERYQVDVKVDLNVALRELENIRDMIQECGGAALDDRFVFTRFVNALPQ-ECEVAKENLSSAAKLTRGDLM 75
QLF F++YQ K + +L +L + M+Q+ GGA ++D+FVF R +++LP E EV K+ LS LTR L+
Sbjct: 129 QLFREFQQYQTPRKENPVASLNKLMGMAIMMQQGGGATVNDQFVFARLIDSLPNPEYEVTKQTLSVVQPLTRDILV 204 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13024.2484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig13024.2484.1 ID=prot_Ecto-sp13_S_contig13024.2484.1|Name=mRNA_Ecto-sp13_S_contig13024.2484.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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