prot_Ecto-sp13_S_contig13014.2477.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13014.2477.1
Unique Nameprot_Ecto-sp13_S_contig13014.2477.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length182
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13014.2477.1 vs. uniprot
Match: D7FKD2_ECTSI (Coiled-coil domain 6-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD2_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.340e-17
Identity = 144/176 (81.82%), Postives = 144/176 (81.82%), Query Frame = 0 
Query:    9 SQQVEAEEECLINRVSSATDTDTGSR--MMKRLMELKKEKEDLALEVEREEELLTNTLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVEEQLAQEREEVKAVTAEKGELETLVEQGAKALLSKLQEATERAHDR 182
            SQQVEAEEECLINR              MMKRLMELKKEKEDLALE             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAVEEQLAQER EVKAVTAEKGELE L EQGAKALLSKLQEA ERAHDR
Sbjct:   79 SQQVEAEEECLINRTXXXXXXXXXXXXXMMKRLMELKKEKEDLALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAVEEQLAQERGEVKAVTAEKGELEILFEQGAKALLSKLQEAVERAHDR 254
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13014.2477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKD2_ECTSI1.340e-1781.82Coiled-coil domain 6-like protein n=1 Tax=Ectocarp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..88
NoneNo IPR availableCOILSCoilCoilcoord: 119..160
NoneNo IPR availableCOILSCoilCoilcoord: 90..110
IPR019152Protein of unknown function DUF2046PFAMPF09755DUF2046coord: 35..101
e-value: 6.5E-18
score: 65.0
coord: 95..153
e-value: 1.0E-6
score: 28.2
IPR019152Protein of unknown function DUF2046PANTHERPTHR15276H4 D10S170 PROTEIN-RELATEDcoord: 34..99
coord: 95..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13014contigEcto-sp13_S_contig13014:536..4800 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13014.2477.1mRNA_Ecto-sp13_S_contig13014.2477.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13014 536..4800 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13014.2477.1 ID=prot_Ecto-sp13_S_contig13014.2477.1|Name=mRNA_Ecto-sp13_S_contig13014.2477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
MGRLCGEQSQQVEAEEECLINRVSSATDTDTGSRMMKRLMELKKEKEDLA
LEVEREEELLTNTLQKKLNQLRQEKVDLENQLEREQEYVVNKLRKQLAQV
TADKERMAMEVEREEEFLTNKLVKQLDLLKEEKAAVEEQLAQEREEVKAV
TAEKGELETLVEQGAKALLSKLQEATERAHDR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019152DUF2046