Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 176 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 126 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462516.642584-UTR-Ecto-sp13_S_contig10224:1034..1084 | 1681462516.642584-UTR-Ecto-sp13_S_contig10224:1034..1084 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10224 1035..1084 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462516.6579645-CDS-Ecto-sp13_S_contig10224:1084..1114 | 1681462516.6579645-CDS-Ecto-sp13_S_contig10224:1084..1114 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10224 1085..1114 - |
| 1681462516.6723952-CDS-Ecto-sp13_S_contig10224:3279..3375 | 1681462516.6723952-CDS-Ecto-sp13_S_contig10224:3279..3375 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10224 3280..3375 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10224.247.1 >prot_Ecto-sp13_S_contig10224.247.1 ID=prot_Ecto-sp13_S_contig10224.247.1|Name=mRNA_Ecto-sp13_S_contig10224.247.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=42bp
MRARFISRLQPKCTRPDGNDQRCTFGAGGCRNGVDVPDSIM* back to topmRNA from alignment at Ecto-sp13_S_contig10224:1035..3375- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10224.247.1 ID=mRNA_Ecto-sp13_S_contig10224.247.1|Name=mRNA_Ecto-sp13_S_contig10224.247.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2341bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10224:1035..3375- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCGCCAGGTTTATCAGCCGGTTGCAACCTAAATGCACGCGACCAGA
CGGGAATGACCAACGCTGTACCTTCGGGGCTGGTGGTTGTCGTAATGTAA
GCCAAGGACCGCGGTGCACTAGGAGGAACAGTTCAAAGCATGACATCTAC
TTGGCACGACGGAAGACTCGTCGAAGTTACCCACGAGCTGAGTTATGTTC
GAAACTTGCCCTACATATTCGAACCGCACAACGCGACCGAATTGTTTTTT
GTTGCTCGTACACGTTGCAAACTTAGCCGAGAGATTCGCCAACATGTAGC
CAAGGGAACCCATGCTATGTTCGTTGCTACGGCAGAAGACGAATGTGCCG
TAGCGGACGGGACAAACACCTGCGGGTTGTAGCGCCTCCTGATTTCCTCT
ACGGTGTAGCGAGAAAAACTGTTGCCGATTCATAAATTCGTAAACTCCGA
ACAAGTGCACCTCGTTCAGCGCTCGTTAAAGTTGCGATCCTGCAGCAGCC
CCTTGTAATATCTTCATTCGGTTATCCATGGTTTATCCATGCGCCTGTTC
GGACACCAGTATACTCCCTGATCGTTCGTTGGACAAGTTGACAATGCTGA
TTTTGGTTTGGCTTGAATGCGCTGCTGTCCGAAAGAAGTTGCTCAAGTAG
ACATGTTGAGCACCTTGTTTGTGGCAGCTCGCTTTTATTTTTTATTGTCT
ACTCGAGCACCGATACAATATTCGAATGCAGCACCTGAGGCACGCCGGGC
ACGACGGTTAGTGCACGTACAGTGCTAGTTTTCGGGTGGCAACACCGTAC
CAAGATGACGTAGTCGTACCAAGACATTTGTCCATTTTTTAGGAAAAGGT
AGTAAGTAAACAGGAGAGGGAGTTGAAGTACGTCGGGATAGGGTATCTCG
TCTTCCTATCTGTACACTTCTTTCTGGGAAAGAATGCGCCGTTGGGTGCT
CTTGGGCCCTTAAAAATACCAGTCGCCCGGAGCCAATATCTGCAGCGGCC
TGGTGTTGAGGTAGGTGCGTTGCTTTGTGACCTTTTGTCAGGGAATTGTC
TGAAACTCAGCGCCGGGCGAACGATGTTCGAAAGCAGGAACCGGGTCCGG
AAAGATGAAGAAGCGATAAACCTCCTAGGTAAGGAGCACGTGCTCTTCTT
TTTCCCGCGGTTTGAAGTGGTTGTGGCTTCGCACCCATCCATTGATCGGC
GAGTTGTTTCGTCGAAGTGTGTTTGTGTGATTTTTGCTGTCCTCTTTTTC
TGGGTTGTGGTGAGGCTGTATTTTTTTCGCCATGCATTTTTCCTCTCTGC
GTCACGAGGGGTGATCATCCGATATTATGCAGTTTTTCTTGCTTGGTCTT
TATTTGATGAACACAGTTCATGAGTAACGCACGAATTTGTCTTGTGAGCA
AACATGTTGGATATGTTCATGTATGTGGAATTGGTGTAACTCCGAGGTTC
GGTTTGGGCTAGAGTTCAGGGCTATGAGTAATGTACATGGAGCATCTCCC
GGCAGTGTAACCTGATTTGTGTGCGGGTTGTTTTGTAGTAGGCTTCGGGT
GGTCAGCTAAAGATGTGGTCGCTACATTGATAACTAGCTGCAATGCTCGA
CAGGTCTGGGTCCTTTCGCACAATGAGGTGCACCCACAGGATCTACGTAG
TACCCCCTGCGCCTCTCGATGTTCTATAATAACGTTATCTCTTCATATCT
AGGGGGTCCCTCTGTCAAGGTTCGAAGTTCATTAATTCAGTAGAGGGATC
GGTACCTCTCCATTGTAGATAATGGCATTTCGGTGCTGACCCAGCGTCCA
CACTCGGCCAGGGCTTTCCTTTTGGGTTTTTGGTGTCCTTTTTTTCTCTG
GTCTGGAGTCATGTGACGTATTGGCTTGCTTTTTTTAGTAGTTGTTTTCG
TTTGAACTTTGGAAGATCACCTGTGCAGTAGGAAAATCCACATGCAGGCG
GTTAGGTGCTCTCAATGACTAAGTACAGGCCTCCTGTACGAAATCGCGCC
TTGATGGTTCAGTTAAATGTTGACGTTACACGAGCTACATACACGCCGTG
CCGCCAGACGCACCCCACTACCGAAATGTTCGCATTAGGTATTTTTAGTG
GTTCGATCGTAGCCACGATAGGGATGAGGCCTGGGTTGCGCATTGTCAGT
CCGACAGTTCGGACCCCCATGACATCGCCATACGTAGATGGAGTCCCAGG
GGGTGTTCCAAGGACACGGATGTATTGACGAAAACCCTTGCTACATTTCA
CCACCCCACAGGGAGTCGATGTCCCTGACTCGATTATGTAAAGGCTTGGA
ACACGTCTACTTCGTTCGGGAGGTCTGTCTCGATCCGGATC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10224:1035..3375- >mRNA_Ecto-sp13_S_contig10224.247.1 ID=mRNA_Ecto-sp13_S_contig10224.247.1|Name=mRNA_Ecto-sp13_S_contig10224.247.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=126bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10224:1035..3375- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCGCCAGGTTTATCAGCCGGTTGCAACCTAAATGCACGCGACCAGA
CGGGAATGACCAACGCTGTACCTTCGGGGCTGGTGGTTGTCGTAATGGAG
TCGATGTCCCTGACTCGATTATGTAA back to top
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