prot_Ecto-sp13_S_contig10223.246.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10223.246.1
Unique Nameprot_Ecto-sp13_S_contig10223.246.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length123
Homology
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match: D7FYY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY7_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 3.950e-41
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0
Query:   50 RNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGISREQILSAIISGGN 122
            RNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVE+GTGISREQILSAIISGGN
Sbjct:  136 RNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEMGTGISREQILSAIISGGN 208          
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match: A0A7S1UHZ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHZ5_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.070e-17
Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   47 MVTRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLG-PVLLFGLAFCLAIPLVEIGTGISREQILSAI 117
            MV RNPNLLA +P G+GGA  AK DT  +SYV+AATRP+G P L  G AF LA P +E  TG+ R+Q LS I
Sbjct:  134 MVVRNPNLLATKPDGWGGAGGAKEDTFYLSYVVAATRPIGKPALALG-AFALATPFIEGVTGVPRDQFLSII 204          
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match: B7FNV7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FNV7_PHATC)

HSP 1 Score: 68.6 bits (166), Expect = 8.060e-12
Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 0
Query:   47 MVTRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGISREQILSAII 118
            MV +NP LLA+ P+G GGA +    TMQ SY++  TRP GP LL+GL F L  P +E  TGI  +  +++ +
Sbjct:  115 MVQQNPGLLALPPSGAGGADSVTDQTMQFSYLVGYTRPFGPFLLYGLLFLLFDPFLEYLTGIPIKTTITSAL 186          
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match: A0A7R9UE42_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE42_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.420e-10
Identity = 34/52 (65.38%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   63 GGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGISREQIL 114
            GGA  AK DT  MSYVIA TRPLGPVLL GL   L++PLVE  TGI R ++L
Sbjct:  125 GGATGAKDDTFYMSYVIAFTRPLGPVLLAGLIAALSVPLVEGLTGIPRAELL 176          
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match: A0A7S2MUE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MUE2_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.710e-10
Identity = 34/62 (54.84%), Postives = 40/62 (64.52%), Query Frame = 0
Query:   47 MVTRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGI 108
            MV RNP LLA+ P     AA A   TMQ SY++AATRP GPVLL G+   L +P +E  TGI
Sbjct:  158 MVQRNPGLLAIPPAN---AAKADGQTMQFSYIVAATRPAGPVLLPGVLTLLCVPAIEAVTGI 216          
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match: A0A7S2K6C2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6C2_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.150e-9
Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 0
Query:   48 VTRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGIS-REQIL 114
            V RNP L++V PTG+GGA  A  +T+ +SYV+ ATR  G V L  LAF L  PL+E  TG+  RE IL
Sbjct:  124 VLRNPALMSVAPTGYGGADGAGQETVVLSYVVDATRDGGQVWLSLLAFLLLTPLLEQVTGVHFREAIL 191          
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match: A0A7S4IU94_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IU94_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.430e-8
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   47 MVTRNPNLLAVRPTG-----FGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGIS-REQILSAI 117
            ++ RNP LL ++P G     +GGAA A  +T+ +SYVIAATRPLG   L GL   +  P ++  TG+  R+  L A+
Sbjct:  160 LLIRNPGLLGIKPDGWGEEGYGGAATAGPETIALSYVIAATRPLGNFGLVGLLALVLTPGIDAATGLGLRDAFLGAL 236          
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match: B5YMT8_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMT8_THAPS)

HSP 1 Score: 59.3 bits (142), Expect = 3.900e-8
Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 0
Query:   47 MVTRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLG---PVLLFGLAFCLAIPLVEIGTGISREQILSAI 117
            MV RNP LL+V+P     AA+A   TMQMSYV+  TRP+G   PVL+ GL   LA+P +E   G+ + ++LS++
Sbjct:  153 MVIRNPGLLSVKPVI---AASADDLTMQMSYVVDFTRPIGAAGPVLILGL---LAVPALESALGVGKGELLSSL 220          
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match: K0RXR5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXR5_THAOC)

HSP 1 Score: 57.8 bits (138), Expect = 8.200e-8
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0
Query:   47 MVTRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGISREQILSAIIS 119
            MV RNP LL V P     A    S TMQ+SY+++ TRPLG   L G+   L IP++E   G+ R +++ ++++
Sbjct:  107 MVMRNPGLLGVEPKD---AVTVTSSTMQLSYIVSFTRPLGNAGLAGIGSLLLIPVIEGTLGLQRGELIGSLLN 176          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FYY7_ECTSI3.950e-4198.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1UHZ5_9STRA2.070e-1759.72Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
B7FNV7_PHATC8.060e-1245.83Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7R9UE42_9STRA1.420e-1065.38Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2MUE2_9STRA7.710e-1054.84Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S2K6C2_9STRA2.150e-952.94Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4IU94_9STRA2.430e-842.86Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B5YMT8_THAPS3.900e-847.30Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
K0RXR5_THAOC8.200e-839.73Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 85..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10223contigEcto-sp13_S_contig10223:1191..3489 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10223.246.1mRNA_Ecto-sp13_S_contig10223.246.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10223 689..4602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10223.246.1 ID=prot_Ecto-sp13_S_contig10223.246.1|Name=mRNA_Ecto-sp13_S_contig10223.246.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp
MINTSILTCVSSFDSLFTSVCYPPSPCPSPVHAVGGATGISCSGNRMVTR
NPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIP
LVEIGTGISREQILSAIISGGN*
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