prot_Ecto-sp13_S_contig13.2456.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13.2456.1
Unique Nameprot_Ecto-sp13_S_contig13.2456.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length498
Homology
BLAST of mRNA_Ecto-sp13_S_contig13.2456.1 vs. uniprot
Match: D7FWR9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR9_ECTSI)

HSP 1 Score: 789 bits (2037), Expect = 1.760e-284
Identity = 453/496 (91.33%), Postives = 458/496 (92.34%), Query Frame = 0
Query:    4 ASLPAKCALDLLSSLPADKKIRLSGGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAVERRHLDVLPGVVLREIVSFTSDSSLSGVCRTTLGAIRELHYKIDMT--DSRKVLDHCPGEDPAGAVLTNHMGLDASGALATGRAVVRITITHVHHTQDPALEQAIRSVVQHSIPTLREIAIRGYPTWTGRARVGAILGELVPLSAKRHRVAPRLARVHLADGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGVGAILRELVPLSAKRHRVAPRLARVHLADGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLRVLAGALAAGHVPRLERLLVRATARYYRGSDVELLALKRAAASRSPPVELELQIKTRLKQ 497
            ASLP   ALD+LSS+PADKKIRLSGGTT  XXXXXXXXXXXXXXXXXXXXXXXXXXXX   PAAA ERR+LDVLPGVVLREIVSFT+DSSLSGVCRTTLGAIRELHYKIDM    S   L          + LTNHMGLDASGALATGRAVVRITITHV H QDPALEQAIR VVQHSIPTLREIAIR YPTW GRARVGAILGELVPLSAKRHRVAPRLARVHL DGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGVGAIL ELVPLSAKRHRVAPRLARVHL DGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQL VLAGALA GHVPRLERLLVRATARYYR SDVELLALKRAAASRSPPVELELQIKTRLKQ
Sbjct:   39 ASLPNTRALDVLSSIPADKKIRLSGGTTTIXXXXXXXXXXXXXXXXXXXXXXXXXXXX---PAAAGERRYLDVLPGVVLREIVSFTTDSSLSGVCRTTLGAIRELHYKIDMNKVSSAHYLKR--------SELTNHMGLDASGALATGRAVVRITITHVLHAQDPALEQAIRRVVQHSIPTLREIAIRRYPTWNGRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAGGHVPRLERLLVRATARYYRDSDVELLALKRAAASRSPPVELELQIKTRLKQ 523          
BLAST of mRNA_Ecto-sp13_S_contig13.2456.1 vs. uniprot
Match: A0A6H5KDB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB3_9PHAE)

HSP 1 Score: 582 bits (1501), Expect = 3.780e-204
Identity = 372/504 (73.81%), Postives = 380/504 (75.40%), Query Frame = 0
Query:    1 MVSASLPAKCALDLLSSLPADKKIRLSGGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAVERRHLDVLPGVVLREIVSFTSDSSLSGVCRTTLGAIRELHYKIDMTD-------SRKVLDHCPGEDPAGAVLTNHMGLDASGALATGRAVVRITITHVHHTQDPALEQAIRSVVQHSIPTLREIAIRGYPTWTGRARVGAILGELVPLSAKRHRVAPRLARVHLADGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGVGAILRELVPLSAKRHRVAPRLARVHLADGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLRVLAGALAAGHVPRLERLLVRATARYYRGSDVELLALKRAAASRSPPVELELQIKTRLKQ 497
            M SASLP K ALD LSSLPADKKIRLSGGT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      ER +LDVLPGVVLREIVSFT+DSSLSGVCRTTLG IRELHYK+DM          R    +C         LT+HMG+DASGALATGRAVVRITITHVH TQDPALEQAIR VVQHSIPTLREI IRGYPTWTGRAR         P         P  AR                                  A A H  D         AP       GAIL ELVPLSAKRHRVAPRLARVHL DGATGVAKAGRAVA GLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSS+RDVAVDDVIL ALSWGQCPLVE LSFTGNRFCPEHRI YLEEMLWVCPRLRELRMDCSRTPHH+LRVLAGALA GHVPRLERLLVRATA YYR SDVEL ALKR AASRSPPVELELQIKTRLKQ
Sbjct:   12 MDSASLPDKRALDPLSSLPADKKIRLSGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------ERHYLDVLPGVVLREIVSFTTDSSLSGVCRTTLGGIRELHYKVDMAKVASAYFFGRLAAAYCSKT----LELTDHMGIDASGALATGRAVVRITITHVHETQDPALEQAIRRVVQHSIPTLREITIRGYPTWTGRAR---------PSGGSCSIQYPPCARSP-------------------------------SAGAPHGPD---------AP-------GAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVATGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSIRDVAVDDVILNALSWGQCPLVEHLSFTGNRFCPEHRITYLEEMLWVCPRLRELRMDCSRTPHHELRVLAGALAGGHVPRLERLLVRATAPYYRDSDVELRALKRVAASRSPPVELELQIKTRLKQ 449          
BLAST of mRNA_Ecto-sp13_S_contig13.2456.1 vs. uniprot
Match: D7FWR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR8_ECTSI)

HSP 1 Score: 520 bits (1340), Expect = 5.250e-182
Identity = 285/385 (74.03%), Postives = 288/385 (74.81%), Query Frame = 0
Query:  114 MTDSRKVL-DHCPGEDPAGAVLTNHMGLDASGALATGRAVVRITITHVHHTQDPALEQAIRSVVQHSIPTLREIAIRGYPTWTGRARVGAILGELVPLSAKRHRVAPRLARVHLADGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGVGAILRELVPLSAKRHRVAPRLARVHLADGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLRVLAGALAAGHVPRLERLLVRATARYYRGSDVELLALKRAAASRSPPVELELQIKTRLKQ 497
            M D R+VL D+ P EDP GA LTNHMGLDASGALATGRAVVRITIT+VHH QDPALEQAIR VVQHSIPTLREIAIRGYPTWTGRARVGAILGELVPLSAKRHRVAPRLARVHL DGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAP                                                                                   RLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQL VLAGALA GHVPRLERLLVRATARYYR SDVELLALKRAAASRSPPVELELQIKT LKQ
Sbjct:    1 MIDCREVLLDYSPSEDPTGAELTNHMGLDASGALATGRAVVRITITYVHHFQDPALEQAIRRVVQHSIPTLREIAIRGYPTWTGRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAP-----------------------------------------------------------------------------------RLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAGGHVPRLERLLVRATARYYRDSDVELLALKRAAASRSPPVELELQIKTLLKQ 302          
BLAST of mRNA_Ecto-sp13_S_contig13.2456.1 vs. uniprot
Match: D8LAY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAY2_ECTSI)

HSP 1 Score: 468 bits (1203), Expect = 3.720e-161
Identity = 259/380 (68.16%), Postives = 267/380 (70.26%), Query Frame = 0
Query:  125 PGEDPAGAVLTNHMGLDASGALATGRAVVRITITHV--------HHTQDPALEQAIRSVVQHSIPTLREIAIRGYPTWTGRARVGAILGELVPLSAKRHRVAPRLARVHLADGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGVGAILRELVPLSAKRHRVAPRLARVHLADGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLRVLAGALAAGHVPRLERLLVRATARYYRGSDVELLALKRAAASRSPPVELELQIKTRLK 496
            PG DPAGA L NHMGL+ASGALATGRA+VRITIT V        HH +  ALEQA+  VV+HSIPTLREI IRG PTW GRARVGAILGELVPLSAKRHRVAPRL+RVHL DGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAP                                                                                   RLRVLGWDDQSSVRD +VDDVILGALSWG+CPLVERLSFTGNRFCPEH I YLEE LWVCPRLRELRMDCSRTPHHQLRVL GAL  GHVPRLERLLVRATA YYR SDVELLALKRAAASRSPPVELELQIKTRLK
Sbjct:    9 PGADPAGADLANHMGLEASGALATGRAIVRITITTVFESANESRHHARYKALEQAVGRVVRHSIPTLREITIRGCPTWNGRARVGAILGELVPLSAKRHRVAPRLSRVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAP-----------------------------------------------------------------------------------RLRVLGWDDQSSVRDASVDDVILGALSWGKCPLVERLSFTGNRFCPEHSIGYLEEALWVCPRLRELRMDCSRTPHHQLRVLVGALVGGHVPRLERLLVRATAPYYRDSDVELLALKRAAASRSPPVELELQIKTRLK 305          
BLAST of mRNA_Ecto-sp13_S_contig13.2456.1 vs. uniprot
Match: A0A6H5KU71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU71_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 7.990e-126
Identity = 193/215 (89.77%), Postives = 197/215 (91.63%), Query Frame = 0
Query:  283 VGAILRELVPLSAKRHRVAPRLARVHLADGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLRVLAGALAAGHVPRLERLLVRATARYYRGSDVELLALKRAAASRSPPVELELQIKTRLKQ 497
            VGAI  ELVPLSAKRHRVA RLARVHL DGATG AKAG+AVAAGL PALEV TFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQS++RD A+DDVILGALSWG CPLVERLSFTG RFCPEH IRYLEEM WVCPRLRELRMDCSRTPHHQLRVLAGALA  HVPRLERLLVRATA YYR SDVELLALK AAASRSPPV LELQIKTRLKQ
Sbjct:   14 VGAIRGELVPLSAKRHRVARRLARVHLVDGATGAAKAGKAVAAGLRPALEVPTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSTIRDAALDDVILGALSWGHCPLVERLSFTGTRFCPEHSIRYLEEMFWVCPRLRELRMDCSRTPHHQLRVLAGALAGEHVPRLERLLVRATAPYYRDSDVELLALKLAAASRSPPVALELQIKTRLKQ 228          
BLAST of mRNA_Ecto-sp13_S_contig13.2456.1 vs. uniprot
Match: A0A6H5KEB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB8_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 5.590e-44
Identity = 120/161 (74.53%), Postives = 126/161 (78.26%), Query Frame = 0
Query:    1 MVSASLPAKCALDLLSSLPADKKIRLSGGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAVERRHLDVLPGVVLREIVSFTSDSSLSGVCRTTLGAIRELHYKIDMTDSRKVLDHCPGEDPAGAVLTNHMGLDASGALATGRAVVRITITHVH 161
            M SASLP K ALDLLSSLPADKKIRLSGGTTXXXXXXXXXX        XXXXXXXXXXXX      A ER +LDVLPGVVLREIVSFT+DSSLSGVCRTTLGAIRELHYK++MT           ED  GA + +HMGLDASGALATGR VVRITITHVH
Sbjct:    1 MDSASLPDKRALDLLSSLPADKKIRLSGGTTXXXXXXXXXXAVAQTVARXXXXXXXXXXXX------AAERHYLDVLPGVVLREIVSFTTDSSLSGVCRTTLGAIRELHYKVNMT-----------EDVVGAEIKHHMGLDASGALATGRDVVRITITHVH 144          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13.2456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FWR9_ECTSI1.760e-28491.33Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KDB3_9PHAE3.780e-20473.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWR8_ECTSI5.250e-18274.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LAY2_ECTSI3.720e-16168.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KU71_9PHAE7.990e-12689.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB8_9PHAE5.590e-4474.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 218..461
e-value: 9.1E-10
score: 39.2
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 245..457

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13contigEcto-sp13_S_contig13:18299..30877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13.2456.1mRNA_Ecto-sp13_S_contig13.2456.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13 18299..31322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13.2456.1 ID=prot_Ecto-sp13_S_contig13.2456.1|Name=mRNA_Ecto-sp13_S_contig13.2456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=498bp
MVSASLPAKCALDLLSSLPADKKIRLSGGTTTTSTTTTTTTTAAAGTAVA
QAVAEAAPSPSSSSPAAAVERRHLDVLPGVVLREIVSFTSDSSLSGVCRT
TLGAIRELHYKIDMTDSRKVLDHCPGEDPAGAVLTNHMGLDASGALATGR
AVVRITITHVHHTQDPALEQAIRSVVQHSIPTLREIAIRGYPTWTGRARV
GAILGELVPLSAKRHRVAPRLARVHLADGATGVAKAGRAVAAGLWPALEV
LTFSHCRANAGHFRDLARGLRSGLAPRLRVLGVGAILRELVPLSAKRHRV
APRLARVHLADGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLA
RGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTG
NRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLRVLAGALAAGHVP
RLERLLVRATARYYRGSDVELLALKRAAASRSPPVELELQIKTRLKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf