prot_Ecto-sp13_S_contig13.2459.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13.2459.1
Unique Nameprot_Ecto-sp13_S_contig13.2459.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length927
Homology
BLAST of mRNA_Ecto-sp13_S_contig13.2459.1 vs. uniprot
Match: A0A6H5JJ89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ89_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 1.180e-92
Identity = 426/553 (77.03%), Postives = 432/553 (78.12%), Query Frame = 0
Query:  364 MMGQPENAANQAASAPAGAARATDSASAQQLASRSLPGASGTVAAEGNQSPAQHVVAPGGEGGGVLGSGDVGVGRSDLHTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKELLSLPTAKAGATDASAAPMTMTAAVPPTXXXXEAANGALGLAATVASFYDELPGSVAALGGVGGVPAALPSPIAPSAVLXSAVAAAAGPRGAVPLPVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVGGGRPPGIDLSPATLQIAGHPPGLPSTAAVAAAATVAARGGGVPQGGISGWGGLPRADETALAVAGIGGGVGTGSGGAEQTRAGAGGVVAVGDVSNPAVAGGGSSRVGISQLPGGGAPRVAGATAGXXXXXXXXXXXXX-AYLQAMLEVQVRQRQLVVQQQXXXLQRQ-VAQTHQNQLVQXXXXXXXXXXXXXXXAQQMNALFQTKQLALKQKLQSGHITLKQ 914
            MMG PEN ANQA SAPAGAARATDSAS QQLASRSLPGAS T AAEGN+SP QHV+APG EGGGVLGSGDVGVGRSD+HTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       SKELLSLPTA+AG TDASAAPM         XXXX   NGALGLAATVASFYDELPGSVAA  GVGGVPA LPSPIAPSAVL    AAAAGPRGAVPL VAAA      XXXXXXXXXXXXXXXXXXXXXXXXXXX  VGGGRPPGIDLS  TLQ                             GGISGWGGLPRADETALA AGIGG V TG GGAEQ             V NP  AGGGSSRVGISQ PGG AP V      XXXXXXXXXXXXX AY+Q MLE QVRQRQLVVQQ XXX     VAQTHQNQL+Q   XXXXXXX     AQQMNALFQTKQLALKQKLQSGHITLKQ
Sbjct:    1 MMGIPENPANQAVSAPAGAARATDSASTQQLASRSLPGASETSAAEGNKSPPQHVIAPGREGGGVLGSGDVGVGRSDVHTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------SKELLSLPTAEAGTTDASAAPMXXXXXXXXXXXXXX--NGALGLAATVASFYDELPGSVAAPRGVGGVPAVLPSPIAPSAVLPLVAAAAAGPRGAVPLTVAAAPTGSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGRPPGIDLSLTTLQ-----------------------------GGISGWGGLPRADETALAGAGIGGVVETGGGGAEQXXXXXXXXXXXXXVPNPPGAGGGSSRVGISQRPGGXAPLVXXXXXXXXXXXXXXXXXXXXAYIQTMLEAQVRQRQLVVQQXXXXXXXXXVAQTHQNQLLQAQLXXXXXXXTLRHQAQQMNALFQTKQLALKQKLQSGHITLKQ 515          
BLAST of mRNA_Ecto-sp13_S_contig13.2459.1 vs. uniprot
Match: D7FWR6_ECTSI (Putative 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR6_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 3.750e-39
Identity = 280/347 (80.69%), Postives = 286/347 (82.42%), Query Frame = 0
Query:  364 MMGQPENAANQAASAPAGAARATDSASAQQLASRSLPGASGTVAAEGNQSPAQHVVAPGGEGGGVLGSGDVGVGRSDLHTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKELLSLPTAKAGATDASAAPMTMTAAVPPTXXXXEAANGALGLAATVASFYDELPGSVAALGGVGGVPAALPSPIAPSAVLXSAVAAAAGPRGAVPLPVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVGGGRPPGIDLSPATLQI 710
            M+G PENAANQA SAPAGAARATDSASAQQLASR LPGAS T AAEGN+SP+QHVVAPGGEGGGVLGSGDVGVGRSDLHTNG  XXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SKELLSLPTA+AG TDASAAP          XXXX                     GSV A GGVGGVP  LPSPIA SA+L S  AAAAGPRGAVPL VAAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VGGGRPPGIDLSPATLQ+
Sbjct:    1 MIGLPENAANQAVSAPAGAARATDSASAQQLASRLLPGASETSAAEGNKSPSQHVVAPGGEGGGVLGSGDVGVGRSDLHTNGGGXXXXXXXXXXXXTRRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SKELLSLPTAEAGTTDASAAPXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXGSVTAPGGVGGVPTVLPSPIAXSAILPSVAAAAAGPRGAVPLAVAAAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGRPPGIDLSPATLQL 341          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13.2459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJ89_9PHAE1.180e-9277.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWR6_ECTSI3.750e-3980.69Putative 2-hydroxy-6-oxo-2,4-heptadienoate hydrola... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 270..302
NoneNo IPR availableCOILSCoilCoilcoord: 862..882
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 535..903
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 535..903

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13contigEcto-sp13_S_contig13:57076..62475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13.2459.1mRNA_Ecto-sp13_S_contig13.2459.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13 54275..62475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13.2459.1 ID=prot_Ecto-sp13_S_contig13.2459.1|Name=mRNA_Ecto-sp13_S_contig13.2459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=927bp
MFEFGNQQGQQQPGERQALAAAGNGHNPPAGAREGSPSVQDPMAMINDSG
ANDAAAAAAAASVAANEPLRIGAGAGAGGFDPGMVAAGLPNMQQAFLPEQ
QQQQLGTFNMVSGGAGVGVMGGGGIGGAGGGRLDMAARPGAPWAGGVATG
LHNQQQQQQQQLLLLQGLQGQGRHAASSTLQQHQPMLGPSGFPSGGMATL
SSSKAAAPLSFMLPAAQMRAQMATQLSQLGRPSSSEDLGVLGAGGFRGSR
ESVGGIGVAGGVVGVDGVSVTQQQQQQQQQQQAQQQQQQQQQQQLVQQQQ
QQLMQQMLQRQQIDHLQQQHHHQLLQQQQQQQQQQQQQQQGLAPTQASTP
LAEENTFLEARRRMMGQPENAANQAASAPAGAARATDSASAQQLASRSLP
GASGTVAAEGNQSPAQHVVAPGGEGGGVLGSGDVGVGRSDLHTNGGGGGG
GRGGRGGGGGARRRGGAAIGKRGGGQAGGGGAAGPQRKRPRQQQRSGSPG
RATVGASSSSSGGSAERTKPQQREPPAALTATFAGATAAATRGSGGAAAA
AAAASKELLSLPTAKAGATDASAAPMTMTAAVPPTAAAAEAANGALGLAA
TVASFYDELPGSVAALGGVGGVPAALPSPIAPSAVLPSAVAAAAGPRGAV
PLPVAAAPTGSGAGPGGGGGGVDGGGARVGAGGGQSGTGGVAVGGGRPPG
IDLSPATLQIAGHPPGLPSTAAVAAAATVAARGGGVPQGGISGWGGLPRA
DETALAVAGIGGGVGTGSGGAEQTRAGAGGVVAVGDVSNPAVAGGGSSRV
GISQLPGGGAPRVAGATAGGGAGGVASQQQQQAYLQAMLEVQVRQRQLVV
QQQQQQLQRQVAQTHQNQLVQAQLLASQVQQRLRHQAQQMNALFQTKQLA
LKQKLQSGHITLKQAQQVSQMQQVSK*
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