mRNA_Ecto-sp13_S_contig13.2459.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig13.2459.1
Unique Name	mRNA_Ecto-sp13_S_contig13.2459.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig13.2459.1 vs. uniprot
Match: A0A6H5JJ89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ89_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 9.650e-92
Identity = 426/553 (77.03%), Postives = 432/553 (78.12%), Query Frame = 2

Query: 1436 MMGQPENAANQAASAPAGAARATDSASAQQLASRSLPGASGTVAAEGNQSPAQHVVAPGGEGGGVLGSGDVGVGRSDLHTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKELLSLPTAKAGATDASAAPMTMTAAVPPTXXXXEAANGALGLAATVASFYDELPGSVAALGGVGGVPAALPSPIAPSAVLXSAVAAAAGPRGAVPLPVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVGGGRPPGIDLSPATLQIAGHPPGLPSTAAVAAAATVAARGGGVPQGGISGWGGLPRADETALAVAGIGGGVGTGSGGAEQTRAGAGGVVAVGDVSNPAVAGGGSSRVGISQLPGGGAPRVAGATAGXXXXXXXXXXXXX-AYLQAMLEVQVRQRQLVVQQQXXXLQRQ-VAQTHQNQLVQXXXXXXXXXXXXXXXAQQMNALFQTKQLALKQKLQSGHITLKQ 3088
            MMG PEN ANQA SAPAGAARATDSAS QQLASRSLPGAS T AAEGN+SP QHV+APG EGGGVLGSGDVGVGRSD+HTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       SKELLSLPTA+AG TDASAAPM         XXXX   NGALGLAATVASFYDELPGSVAA  GVGGVPA LPSPIAPSAVL    AAAAGPRGAVPL VAAA      XXXXXXXXXXXXXXXXXXXXXXXXXXX  VGGGRPPGIDLS  TLQ                             GGISGWGGLPRADETALA AGIGG V TG GGAEQ             V NP  AGGGSSRVGISQ PGG AP V      XXXXXXXXXXXXX AY+Q MLE QVRQRQLVVQQ XXX     VAQTHQNQL+Q   XXXXXXX     AQQMNALFQTKQLALKQKLQSGHITLKQ
Sbjct:    1 MMGIPENPANQAVSAPAGAARATDSASTQQLASRSLPGASETSAAEGNKSPPQHVIAPGREGGGVLGSGDVGVGRSDVHTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------SKELLSLPTAEAGTTDASAAPMXXXXXXXXXXXXXX--NGALGLAATVASFYDELPGSVAAPRGVGGVPAVLPSPIAPSAVLPLVAAAAAGPRGAVPLTVAAAPTGSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGRPPGIDLSLTTLQ-----------------------------GGISGWGGLPRADETALAGAGIGGVVETGGGGAEQXXXXXXXXXXXXXVPNPPGAGGGSSRVGISQRPGGXAPLVXXXXXXXXXXXXXXXXXXXXAYIQTMLEAQVRQRQLVVQQXXXXXXXXXVAQTHQNQLLQAQLXXXXXXXTLRHQAQQMNALFQTKQLALKQKLQSGHITLKQ 515

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13.2459.1 vs. uniprot
Match: D7FWR6_ECTSI (Putative 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR6_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 6.280e-39
Identity = 280/347 (80.69%), Postives = 286/347 (82.42%), Query Frame = 2

Query: 1436 MMGQPENAANQAASAPAGAARATDSASAQQLASRSLPGASGTVAAEGNQSPAQHVVAPGGEGGGVLGSGDVGVGRSDLHTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKELLSLPTAKAGATDASAAPMTMTAAVPPTXXXXEAANGALGLAATVASFYDELPGSVAALGGVGGVPAALPSPIAPSAVLXSAVAAAAGPRGAVPLPVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVGGGRPPGIDLSPATLQI 2476
            M+G PENAANQA SAPAGAARATDSASAQQLASR LPGAS T AAEGN+SP+QHVVAPGGEGGGVLGSGDVGVGRSDLHTNG  XXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SKELLSLPTA+AG TDASAAP          XXXX                     GSV A GGVGGVP  LPSPIA SA+L S  AAAAGPRGAVPL VAAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VGGGRPPGIDLSPATLQ+
Sbjct:    1 MIGLPENAANQAVSAPAGAARATDSASAQQLASRLLPGASETSAAEGNKSPSQHVVAPGGEGGGVLGSGDVGVGRSDLHTNGGGXXXXXXXXXXXXTRRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SKELLSLPTAEAGTTDASAAPXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXGSVTAPGGVGGVPTVLPSPIAXSAILPSVAAAAAGPRGAVPLAVAAAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGRPPGIDLSPATLQL 341

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig13.2459.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig13.2459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JJ89_9PHAE	9.650e-92	77.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FWR6_ECTSI	6.280e-39	80.69	Putative 2-hydroxy-6-oxo-2,4-heptadienoate hydrola...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig13	contig	Ecto-sp13_S_contig13:54275..62475 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	3127
Hectar predicted targeting category	other localisation
Exons	5
Cds size	2781

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig13.2459.1	prot_Ecto-sp13_S_contig13.2459.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig13 57076..62475 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462695.3921385-UTR-Ecto-sp13_S_contig13:54274..54361	1681462695.3921385-UTR-Ecto-sp13_S_contig13:54274..54361	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig13 54275..54361 +
1681462695.4036705-UTR-Ecto-sp13_S_contig13:56816..57075	1681462695.4036705-UTR-Ecto-sp13_S_contig13:56816..57075	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig13 56817..57075 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462695.4137478-CDS-Ecto-sp13_S_contig13:57075..57624	1681462695.4137478-CDS-Ecto-sp13_S_contig13:57075..57624	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig13 57076..57624 +
1681462695.429943-CDS-Ecto-sp13_S_contig13:58262..59840	1681462695.429943-CDS-Ecto-sp13_S_contig13:58262..59840	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig13 58263..59840 +
1681462695.4387593-CDS-Ecto-sp13_S_contig13:60269..60788	1681462695.4387593-CDS-Ecto-sp13_S_contig13:60269..60788	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig13 60270..60788 +
1681462695.446673-CDS-Ecto-sp13_S_contig13:62340..62475	1681462695.446673-CDS-Ecto-sp13_S_contig13:62340..62475	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig13 62341..62475 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig13:54275..62475+
coding sequence from alignment at Ecto-sp13_S_contig13:54275..62475+

protein sequence of mRNA_Ecto-sp13_S_contig13.2459.1

>prot_Ecto-sp13_S_contig13.2459.1 ID=prot_Ecto-sp13_S_contig13.2459.1|Name=mRNA_Ecto-sp13_S_contig13.2459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=927bp
MFEFGNQQGQQQPGERQALAAAGNGHNPPAGAREGSPSVQDPMAMINDSG
ANDAAAAAAAASVAANEPLRIGAGAGAGGFDPGMVAAGLPNMQQAFLPEQ
QQQQLGTFNMVSGGAGVGVMGGGGIGGAGGGRLDMAARPGAPWAGGVATG
LHNQQQQQQQQLLLLQGLQGQGRHAASSTLQQHQPMLGPSGFPSGGMATL
SSSKAAAPLSFMLPAAQMRAQMATQLSQLGRPSSSEDLGVLGAGGFRGSR
ESVGGIGVAGGVVGVDGVSVTQQQQQQQQQQQAQQQQQQQQQQQLVQQQQ
QQLMQQMLQRQQIDHLQQQHHHQLLQQQQQQQQQQQQQQQGLAPTQASTP
LAEENTFLEARRRMMGQPENAANQAASAPAGAARATDSASAQQLASRSLP
GASGTVAAEGNQSPAQHVVAPGGEGGGVLGSGDVGVGRSDLHTNGGGGGG
GRGGRGGGGGARRRGGAAIGKRGGGQAGGGGAAGPQRKRPRQQQRSGSPG
RATVGASSSSSGGSAERTKPQQREPPAALTATFAGATAAATRGSGGAAAA
AAAASKELLSLPTAKAGATDASAAPMTMTAAVPPTAAAAEAANGALGLAA
TVASFYDELPGSVAALGGVGGVPAALPSPIAPSAVLPSAVAAAAGPRGAV
PLPVAAAPTGSGAGPGGGGGGVDGGGARVGAGGGQSGTGGVAVGGGRPPG
IDLSPATLQIAGHPPGLPSTAAVAAAATVAARGGGVPQGGISGWGGLPRA
DETALAVAGIGGGVGTGSGGAEQTRAGAGGVVAVGDVSNPAVAGGGSSRV
GISQLPGGGAPRVAGATAGGGAGGVASQQQQQAYLQAMLEVQVRQRQLVV
QQQQQQLQRQVAQTHQNQLVQAQLLASQVQQRLRHQAQQMNALFQTKQLA
LKQKLQSGHITLKQAQQVSQMQQVSK*

mRNA from alignment at Ecto-sp13_S_contig13:54275..62475+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig13.2459.1 ID=mRNA_Ecto-sp13_S_contig13.2459.1|Name=mRNA_Ecto-sp13_S_contig13.2459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8201bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13:54275..62475+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGACACGCAGAATGGAATAGGGCAGAGGCGCGTGAAAGGAAGAGGCTGC
CTTGCAGGACACGGAGTGCCGCTGATTGTTTCGTCAGGTGAGCGAAGCAC
CTTCACATTGTTGTGCTTCGGGTTCTTTGTTGTGGCCGAATCTCTCTCTA
CAAAAAACTCAAACTTGCAACGTTTTGTCTTTGTTCCTCTGCTTCGTTTT
GGGTTTTTGGCCAATGATGCACGTGTACCAAAGCCCCTACAGCCCGGGAG
AGGGAGGGGACTCGTTCTGTGTTAGACCCTACGGGGCAAGACACGGCTAC
TTAGGAATATCTTTGCCTCTCGATCAAGAAATCGTTGTCACCATGAATCA
CCCCTCACTCATGGCGCTGCTAGTGTATACGTAAGCTATCCCTGGGCAGC
GCGATCGGTTTTCAGCAGTGCAGAGCTCGTATTTTTTATTGCGCCGACTC
CGCCCCGGGCTACTTCGGCCATCGAAGTGTGTTGCACTCTACACCCCCCT
CTCGCACCGCCTGTTGGATGGTCCGGCTTGCAACAGCAGCAACAGTTGCG
TTCGGTGAGGTTTTGAAAATATCATTTGGGTTTCTCTCTCCATCCCTCTC
GTGTCGTCTCCGAGCGTGGAAGTACGTGTCATCCATCATCGCCGAAGCTC
TCGCGGTTGTTAAACTCTCTAACCAAGCGGCATCAGCAAGTACTCTCTGC
TGCCTGTGGGCGACTTGCCTGGTTCCTGTTTGCTGCGCGTTTGCACATCT
GGCTGGTGCATACGCCGGAAACCAGGCGGAAGCCAGCACAGCCATCTCCA
CGCGTTGACTGCTGCACGCTGCTGCTGCTGCGGCCTGGCTCTGATGTTTC
TATCATAGATGTGACAGCAGCATCAGTACCGACCAAACAAACACGTGCGG
TGACGTGGCTGCTGTACAGCAAGTAGGCCGGCTACACAGCAGCCGCGGTT
GTTCCTCGAGGAGCAGTATTTCAAGCGCGGAGTAGTACGCCACTGCTTGC
CCTTGCGATGGTGTAGCTGGATTCGCGAGTTCAGCCGTCGCTATCACGGG
AAAAGCCGGTGTGTGCGCAAGCTCCTACGACACACATGGATGCTAAATAT
ATATACCGCCGTACCGCCGTACCGCCGTGATGTTGGTTGTACCAGGCGCA
CAAGTTTTTTTTTTTCCACGCATGTGTTGGTTGCAAGTGTGTACGTACCT
TGAAGAACCCGCGTCTTACATGATGATGTGATAGTGTTGTACTGATTGTT
CTACGTAAGTTTAATATAACGTCACAAAAGACACCACCAGCGTTGGTGTA
ACAAACCAAGTGCAGGCAGGTAGGACCAACGTTCACGCCAGCGCACGGGC
CCATAGCGCCGATTGTGTGTGTGTTGCCGCCAAAACCCGTGCCCCACACT
TCCCAAACAGAAAAGAAGAAACTCACTTCCGACCCTGCAGGAGTTTCTTT
CTCTCGTCAACTATCAGTTGTATCAAACTACTTGGAAGCACTGTTATAGT
AGGTCACCACAACCATTTCTATGCATTTAGGGCGATAAATACGTAAAGTA
AGGGTGCATTCTCTTTTGTTTTTCGTCCTTTGGAGTCCTGTGAGGATGAG
CAAATCCCGTGGTCGCAGACTAACTTTCCCTACCTATGGGTATACTGAAA
ACAATCGTCCCGAAGCGTCCGCAAGCCAGCAGAAATCAACGACAGATAGT
TTGGAACCCTCCGCTCGCCTCTTGACGCTATAAGGTCACGACAAACTATG
ATATTAGCATGTTGTGTGAATCGACGGTGTCGTCGAGATACATGCTGATG
GTTGGGTACGTTTTTTGTTTGGGTACTCTTTTTATTTCGGTTTCGGGGAC
GCAAGAATATAGGCCGTTGTTAAGCTGCCCACCACCGCCTTAATCGGGGG
CCCCCATTGGTGTGGATACAATAACACGCCAAGAGCTGGTGTATGAACAC
GTAGCGGAGCCTTGTAAATTTGTGAAGAGCGAAAAACGCCGTGGTCAAAT
ATCAGAGCGTCAGCAGCAGCACATCTTGAGGACAAATGTTTGGAACTGTC
AGCAGGTTGCCGTCCAGGGTTTAGGCTAGTGGTTGGCACGCCCTTCGACC
CCACCTCCACCCCCACCCGCTTCGTCTCGACGATGCTCCTTGTTACGGGG
ATATATCTAGTGAAGAGTAGTTTTGTATCTTGAGCTAGAGCTCACCCAGG
AACGAGTAAAATATTCACCACACAACACTATGAAGTCATTGCTCACCTAT
CCCGGACTCTTCATCTGTGGAAGAGATGAGTTAATCTGGCGTGGTTTTTG
AGAAACGTGGTTTGTAAGAGAGAGAAGAGAAAAATAGCTAAGGTGACTTT
CTACTTGATGTCAACAGTGTGCCGAATGGTATGCATGCGGTGCCTCTTCG
ACAAAGACGAGGAGGAACAGCGGTGGTGCCTACGCTAGAAAGAGATGCGT
GGCCAATAGTGAACTGACGAGGGATATAGTGAGAAGCTTACCTCCCCCCC
CCTCGCCTCTCTTTGTTGCGACCTCTCTCTCTCGTAACGCAGACCGCCAA
CAAGACAGCAGTGCTCGAACTCTGGCACCGAAAAATAAGTCATTTTCTTC
GATCGGGGGTGCGGGTGGCAGCAGGGGGATCGAGTGGACGAAGCACTGCC
ATACAGGAGGAGCACCTTAAAGGGTCGCGACGATTCGGGCTCCTGTTTCG
GACAGCCTCGCGTGATGGGAGCGTTCCAACTCTGCAGCAGAGCACAACGC
GCAGCGGTATTGCTTGTGTAGGTTTCCTAACTTACATCCAGCTAGAACAC
CATGTTCGAGTTCGGGAATCAGCAGGGGCAGCAGCAGCCGGGCGAACGGC
AAGCGCTGGCGGCGGCGGGCAATGGTCACAACCCCCCGGCAGGCGCCCGT
GAGGGGAGTCCGTCCGTCCAAGACCCGATGGCAATGATCAACGACAGCGG
AGCAAATGATGCTGCTGCTGCTGCTGCTGCTGCTTCTGTTGCCGCAAACG
AACCGCTAAGGATCGGCGCCGGCGCCGGTGCCGGCGGCTTCGACCCGGGT
ATGGTGGCGGCCGGGTTGCCCAACATGCAGCAGGCGTTTTTGCCTGAGCA
GCAGCAGCAGCAGCTTGGCACTTTCAACATGGTGAGCGGTGGGGCCGGCG
TTGGCGTTATGGGTGGTGGCGGAATAGGCGGGGCTGGGGGCGGCCGACTG
GACATGGCAGCAAGGCCTGGGGCGCCCTGGGCGGGAGGTGTCGCAACCGG
TCTGCACAACCAGCAGCAGCAGCAGCAACAGCAGCTGCTGCTGCTCCAGG
GCTTACAGGGGCAGGGACGGCACGCAGCTTCCTCGACACTGCAGCAACAT
GTGGGTATTTTTCTGGAGTGTGTATGTAGCATCGACCGCGCTCTCTGACG
GACCAATGAAGAGACTTATAATTGGTGTGTCTCAGTGCAGTGCGGTTGAA
ATAATAAAATACCTATGAAGGCCACGATCTGTGATACCTCCAACCACGAT
CGCTTTTCGGCGAGTGCGCGTCTGTAAAATTCACAAAAGCAGTGGCGACT
GGGAGATACTTGCCGAATTCAAAAGTATGTATAGCCGATGTATTTAAATA
GTCTCGCAAATTCAGAGGGACACACGGACCAGATCAGGTCACGGATTGTT
GACGGCCCGCGGGGGGCCCCCGGAGGAGAATTCTGTGTGGGGTTGAGCAT
GTTTCGCTTTTTATGTCGAAGAACCGATGTGAACAAGACGAATCCGTGAG
TGTCGGTAAGGTTTCCAGCCTTCGGGTGGCAGAACAGCGGCGATGTCGCT
GCACAACTCCCCTCTTCCCGGCAACTCTGAGAGCTCTCGGCACATCGTAG
ATGACTGTCCCGTGATCGTCCGGCCTTAATCGTCGTAGAATCAGCCGAGT
AGTACAGCACAGAAGCAGCCGAGAAACAGCTGAACGTTTTTTTTGCGCGC
GTGTGTGTGTGCCCTGCGTTCCCGTCCGAATCTTGCAGCAACCGATGTTG
GGGCCCTCTGGGTTTCCTTCTGGCGGCATGGCCACGCTCTCTTCCTCCAA
AGCCGCGGCGCCGCTGAGCTTCATGCTCCCCGCCGCACAGATGCGCGCGC
AGATGGCGACGCAGTTGAGCCAGCTGGGGCGCCCCTCTTCGAGCGAAGAC
TTGGGCGTCCTTGGCGCGGGCGGTTTCAGGGGCAGCAGGGAGAGCGTTGG
CGGCATTGGCGTCGCCGGTGGTGTCGTCGGTGTTGATGGTGTAAGCGTTA
CTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCTCAGCAACAGCAG
CAGCAACAGCAACAGCAACAGCTGGTGCAGCAGCAGCAGCAGCAGCTGAT
GCAGCAGATGCTTCAGCGGCAGCAGATCGACCACCTTCAGCAGCAGCATC
ACCACCAACTCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGGGTCTAGCCCCGACCCAGGCGTCAACACCGCTGGCCGAGGA
GAACACGTTCCTGGAGGCGCGCCGTCGCATGATGGGGCAACCGGAGAACG
CCGCAAACCAAGCCGCATCGGCGCCCGCCGGTGCCGCTCGTGCCACAGAC
TCAGCCTCGGCCCAACAACTGGCCTCGCGCTCACTACCCGGCGCTTCTGG
GACCGTCGCCGCCGAGGGCAACCAGTCCCCAGCCCAGCACGTTGTCGCCC
CTGGTGGTGAAGGTGGCGGGGTTCTAGGCTCCGGCGACGTCGGCGTGGGA
CGATCTGATCTCCATACCAACGGCGGAGGAGGAGGAGGAGGAAGAGGAGG
AAGAGGAGGAGGAGGAGGCGCAAGAAGAAGAGGTGGCGCTGCTATTGGGA
AAAGGGGAGGGGGTCAGGCGGGCGGTGGCGGGGCGGCGGGGCCTCAACGA
AAACGGCCCCGGCAACAACAACGATCGGGGTCTCCCGGACGGGCCACGGT
CGGCGCCAGTAGCAGTAGCAGCGGCGGTAGCGCGGAGCGGACAAAACCTC
AACAGCGCGAGCCGCCAGCAGCTCTCACGGCCACTTTTGCTGGCGCTACG
GCGGCCGCTACTCGTGGTAGCGGTGGCGCCGCCGCCGCCGCCGCCGCCGC
TAGCAAAGAGCTTCTCTCGCTGCCAACAGCGAAAGCGGGGGCAACAGACG
CGAGCGCGGCGCCGATGACCATGACAGCAGCTGTGCCGCCGACGGCAGCA
GCAGCAGAAGCAGCTAATGGGGCGCTGGGCCTAGCCGCCACGGTAGCGAG
CTTCTACGACGAGCTCCCCGGGAGCGTGGCCGCGCTGGGAGGGGTCGGCG
GCGTGCCGGCGGCGTTGCCGTCTCCGATCGCGCCGTCCGCTGTATTGCCG
TCGGCGGTCGCGGCCGCCGCGGGCCCGCGTGGGGCGGTCCCGCTTCCCGT
TGCCGCTGCTCCAACGGGGAGCGGCGCGGGGCCAGGGGGCGGCGGCGGAG
GCGTCGATGGCGGTGGCGCCAGGGTGGGAGCTGGGGGAGGGCAGTCGGGG
ACTGGGGGGGTTGCAGTGGGGGGTGGCCGACCTCCGGGGATTGATTTGTC
GCCGGCGACCTTGCAGGTGCGAAATTAAGTCCACATGATCCACACGGGAT
ACTTGTGTGTGGGGGGGAGCTGCTGCAAACTTCAAGACTTGATTTGTATT
CCTGGCGATATGAGTACGGTCTGCCTGTAAGCCAGCGGCAAGTTCTCGGG
GACTCGAACGTGGTTGTTTGCTTTCGTCCGGTCTTTGTTTTTCTCGTGCT
CGTTCGAGAGTTGGGTGTCTTTTTCAAGAGATGAAGTTGAGCGACTTTTC
TCGGCCTTGCCCTCCCCCACGTCGGCACGCGAGCGACGTTGCGTTGTAAG
AGTGCGCCCCATCTTGTCTTTTATCTCTCCTTGTGGTACTTCTCCACTTG
GTAGTCCCTAGGCTTGGCACGATGTTCTTGCTCCTGGAGTGGATGCGCAC
AACAACAGCTACCCGGAGCCTTGACAATTTTCTCCTCTCCCGCAGATTGC
TGGACACCCACCAGGACTACCATCAACGGCGGCGGTGGCGGCGGCGGCGA
CGGTAGCAGCAAGAGGAGGAGGGGTCCCGCAGGGCGGCATCAGTGGGTGG
GGGGGATTACCACGCGCGGACGAGACGGCGTTAGCCGTGGCGGGCATCGG
GGGGGGGGTTGGAACGGGAAGCGGCGGGGCGGAACAGACCCGTGCCGGGG
CCGGGGGAGTTGTGGCGGTCGGAGACGTTTCTAACCCCGCCGTAGCGGGC
GGTGGTAGCAGTCGAGTCGGGATCTCCCAGCTACCCGGGGGGGGCGCGCC
GCGTGTTGCGGGGGCGACGGCGGGAGGGGGGGCGGGCGGTGTGGCGAGCC
AGCAGCAGCAGCAGGCCTATCTCCAGGCGATGCTCGAGGTGCAGGTGCGG
CAGAGGCAGCTCGTGGTGCAGCAGCAGCAGCAGCAGCTGCAGAGGCAAGT
GGCGCAGACGCACCAGAACCAGCTAGTACAAGCCCAGCTGCTGGCTAGCC
AGGTGCAACAGCGGGTAAGCGATGTGTGTGAACGTGCGCGCGTGTATGTC
CTTGTTGGTTGGCATTTACAGACGCTGAAATCGGCGGGCCAACCGCTTGG
CATCAGTCTTGCCGGCGGTGGGGCGCAGGGCGGCGGCGTGCTCTGATTTG
TTAGCGTACCTTAGCGGTTAGACAATTGACCACGCGTCGTCTTCTCAACC
CACTTCCAATGCCCCATGAAAGCTACCGTCTTCTCCTGGCTGTTCTATGC
CTCAAACATCTCCCTCCTTCTACTTTTCCCAGCTCAGTCATGTACACTCC
CCTCTCTTTCTTGTACATCGGATATTCCGTAACTACGGAACCCGGTCTTC
GCACTCGGAGCCACATTCACATATTTACTTGTCGTCTTCATCGTCTACCT
TCCTTTATCTTCGTCCACGTTATCGAAGGCCAATATCCACGTTCCTGAAT
TTGACCTTGTCAGCGTTGTTCCTGCATCCTTTGGTCAATGTAGGCATTAC
TTGAACCCTAATTCTTATTTTTAACTTCCGTCCACATGTAGACCCTCCTG
ATGCTCGGTTGCAAAAAGCAACAGACAGCTTCTCCTCGAACTCCCTAGAC
CTTCCGTTTCCAGCGTATCACCTTCGTCGAATTCGAACTCTTTCTGTACG
TCACCTACAATCTTGACCCACTCCGTGGGTTTTCTACCCCTCGTCTTATT
TGCCCATTTCGCCTCCCAAGCTGTTCTCGGCAACCTCTCCTCTCCCATAC
TGCCCATGGGGTGCTACCGTCTTAGCTTCCTCGCATCTCTTCCCGATCGT
AAGGATTGGATCCTCAGTTCTACTCTGACGGCTGCATTACTTGTGCGCTT
GGAGCATCATATGATGATTTTCGCTGCTTTCATCTGCGCCGCCTCGAGTG
GACGAGTGGACTAGCTTCTTTTTTCCTTCCCACACTTATCCGGCGTACTG
TAGCGGCGGTACGATTACGCTCTTCAAAACTGTCAATTTGGGTGCGTGTA
TCGAGGTGCCGGTGTGCGAGTACAGTGTTGGTAGCAGCTTCCCTGCTCGT
GTTTCGCGCTTTTCCGCTACCTTGGACATGTGTTCATTCCACGAGCGGTC
CATTGCGATCTCTACTGCGAGGCATTGCATGTGTACCGCTCCACTACTGC
AAGCTCCTCGACCCCCCACTTCCATCTACACTCTACTGGTATCTCCTTGT
GCTCGTTGTTTACCATGACGGCATTCTTCCTAACGATGCCAGACAATCTC
CACGTACATGTATCACCACAATCCTCCGCAGCGTCAATCTTCAGTTGAAG
TCCCTCAGGGGTGTCGTGCTGGGTGACCGTCAGCTGTACGTGCTTGATGC
TATCTTGGGTCTTGCATATTTTTTTCCTGGGCGGTCACGCAACGTTCGAT
GCCCCCCCACCACCGACGCACCGTGCACCTATGGTGCATCTTGAGCAAGT
TTGTTCGACGGTGGGAAACAAAGAAAACACTCGCCGCTGTGTTTTACTCT
CTCTTGCTTTGCTTTGGTTTGGTTTTACGCCTGTTTGCCGCCTGACCGAC
TGCTGTGGTGGGACAGCTTCGCCATCAGGCTCAGCAGATGAACGCCTTGT
TCCAGACCAAGCAGCTCGCCCTCAAGCAGAAGCTTCAGTCCGGGCACATC
ACGCTCAAGCAGGCCCAGCAAGTGTCTCAAATGCAGCAGGTAAGCAAATG
A

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13:54275..62475+

>mRNA_Ecto-sp13_S_contig13.2459.1 ID=mRNA_Ecto-sp13_S_contig13.2459.1|Name=mRNA_Ecto-sp13_S_contig13.2459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2781bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13:54275..62475+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTCGAGTTCGGGAATCAGCAGGGGCAGCAGCAGCCGGGCGAACGGCA
AGCGCTGGCGGCGGCGGGCAATGGTCACAACCCCCCGGCAGGCGCCCGTG
AGGGGAGTCCGTCCGTCCAAGACCCGATGGCAATGATCAACGACAGCGGA
GCAAATGATGCTGCTGCTGCTGCTGCTGCTGCTTCTGTTGCCGCAAACGA
ACCGCTAAGGATCGGCGCCGGCGCCGGTGCCGGCGGCTTCGACCCGGGTA
TGGTGGCGGCCGGGTTGCCCAACATGCAGCAGGCGTTTTTGCCTGAGCAG
CAGCAGCAGCAGCTTGGCACTTTCAACATGGTGAGCGGTGGGGCCGGCGT
TGGCGTTATGGGTGGTGGCGGAATAGGCGGGGCTGGGGGCGGCCGACTGG
ACATGGCAGCAAGGCCTGGGGCGCCCTGGGCGGGAGGTGTCGCAACCGGT
CTGCACAACCAGCAGCAGCAGCAGCAACAGCAGCTGCTGCTGCTCCAGGG
CTTACAGGGGCAGGGACGGCACGCAGCTTCCTCGACACTGCAGCAACATC
AACCGATGTTGGGGCCCTCTGGGTTTCCTTCTGGCGGCATGGCCACGCTC
TCTTCCTCCAAAGCCGCGGCGCCGCTGAGCTTCATGCTCCCCGCCGCACA
GATGCGCGCGCAGATGGCGACGCAGTTGAGCCAGCTGGGGCGCCCCTCTT
CGAGCGAAGACTTGGGCGTCCTTGGCGCGGGCGGTTTCAGGGGCAGCAGG
GAGAGCGTTGGCGGCATTGGCGTCGCCGGTGGTGTCGTCGGTGTTGATGG
TGTAAGCGTTACTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCTC
AGCAACAGCAGCAGCAACAGCAACAGCAACAGCTGGTGCAGCAGCAGCAG
CAGCAGCTGATGCAGCAGATGCTTCAGCGGCAGCAGATCGACCACCTTCA
GCAGCAGCATCACCACCAACTCCTCCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGGGTCTAGCCCCGACCCAGGCGTCAACACCG
CTGGCCGAGGAGAACACGTTCCTGGAGGCGCGCCGTCGCATGATGGGGCA
ACCGGAGAACGCCGCAAACCAAGCCGCATCGGCGCCCGCCGGTGCCGCTC
GTGCCACAGACTCAGCCTCGGCCCAACAACTGGCCTCGCGCTCACTACCC
GGCGCTTCTGGGACCGTCGCCGCCGAGGGCAACCAGTCCCCAGCCCAGCA
CGTTGTCGCCCCTGGTGGTGAAGGTGGCGGGGTTCTAGGCTCCGGCGACG
TCGGCGTGGGACGATCTGATCTCCATACCAACGGCGGAGGAGGAGGAGGA
GGAAGAGGAGGAAGAGGAGGAGGAGGAGGCGCAAGAAGAAGAGGTGGCGC
TGCTATTGGGAAAAGGGGAGGGGGTCAGGCGGGCGGTGGCGGGGCGGCGG
GGCCTCAACGAAAACGGCCCCGGCAACAACAACGATCGGGGTCTCCCGGA
CGGGCCACGGTCGGCGCCAGTAGCAGTAGCAGCGGCGGTAGCGCGGAGCG
GACAAAACCTCAACAGCGCGAGCCGCCAGCAGCTCTCACGGCCACTTTTG
CTGGCGCTACGGCGGCCGCTACTCGTGGTAGCGGTGGCGCCGCCGCCGCC
GCCGCCGCCGCTAGCAAAGAGCTTCTCTCGCTGCCAACAGCGAAAGCGGG
GGCAACAGACGCGAGCGCGGCGCCGATGACCATGACAGCAGCTGTGCCGC
CGACGGCAGCAGCAGCAGAAGCAGCTAATGGGGCGCTGGGCCTAGCCGCC
ACGGTAGCGAGCTTCTACGACGAGCTCCCCGGGAGCGTGGCCGCGCTGGG
AGGGGTCGGCGGCGTGCCGGCGGCGTTGCCGTCTCCGATCGCGCCGTCCG
CTGTATTGCCGTCGGCGGTCGCGGCCGCCGCGGGCCCGCGTGGGGCGGTC
CCGCTTCCCGTTGCCGCTGCTCCAACGGGGAGCGGCGCGGGGCCAGGGGG
CGGCGGCGGAGGCGTCGATGGCGGTGGCGCCAGGGTGGGAGCTGGGGGAG
GGCAGTCGGGGACTGGGGGGGTTGCAGTGGGGGGTGGCCGACCTCCGGGG
ATTGATTTGTCGCCGGCGACCTTGCAGATTGCTGGACACCCACCAGGACT
ACCATCAACGGCGGCGGTGGCGGCGGCGGCGACGGTAGCAGCAAGAGGAG
GAGGGGTCCCGCAGGGCGGCATCAGTGGGTGGGGGGGATTACCACGCGCG
GACGAGACGGCGTTAGCCGTGGCGGGCATCGGGGGGGGGGTTGGAACGGG
AAGCGGCGGGGCGGAACAGACCCGTGCCGGGGCCGGGGGAGTTGTGGCGG
TCGGAGACGTTTCTAACCCCGCCGTAGCGGGCGGTGGTAGCAGTCGAGTC
GGGATCTCCCAGCTACCCGGGGGGGGCGCGCCGCGTGTTGCGGGGGCGAC
GGCGGGAGGGGGGGCGGGCGGTGTGGCGAGCCAGCAGCAGCAGCAGGCCT
ATCTCCAGGCGATGCTCGAGGTGCAGGTGCGGCAGAGGCAGCTCGTGGTG
CAGCAGCAGCAGCAGCAGCTGCAGAGGCAAGTGGCGCAGACGCACCAGAA
CCAGCTAGTACAAGCCCAGCTGCTGGCTAGCCAGGTGCAACAGCGGCTTC
GCCATCAGGCTCAGCAGATGAACGCCTTGTTCCAGACCAAGCAGCTCGCC
CTCAAGCAGAAGCTTCAGTCCGGGCACATCACGCTCAAGCAGGCCCAGCA
AGTGTCTCAAATGCAGCAGGTAAGCAAATGA