prot_Ecto-sp13_S_contig12989.2452.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12989.2452.1
Unique Nameprot_Ecto-sp13_S_contig12989.2452.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length201
Homology
BLAST of mRNA_Ecto-sp13_S_contig12989.2452.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 5.380e-92
Identity = 153/187 (81.82%), Postives = 170/187 (90.91%), Query Frame = 0
Query:    1 MTMRASMATPSSNSPSCAYYNENTGLWDEDGLVTEAATTPMDEGHAAGLTGLNVSCWSFHLSDFTISADEVGSGFQHVELTAGIAVALKVREISKTGVLVLLFVLLLLVVVRSASRMADVKTKLSKQLAGKTDEVYIATGKSRNRPTLAALVEADPTPDTHHRRARRRSKRRAKTTFRQHMIKRWAG 187
            MTMRASMAT SS SPSCAYYNE TGLWDEDGLVTEAA TP+DE +A GLT LNV+CWSFHLSDFTISADEVGSGFQHV+LTAGIAV L+VR+ISK GVL+LLFVLLLLVV+R+ SRMADVKT LSK+L GKTDEVY+ATGKSRNRPTL ALV+A+PTPDTHHR AR+R +RR KTTFRQHM+KR+ G
Sbjct:  285 MTMRASMATTSSKSPSCAYYNELTGLWDEDGLVTEAAITPIDESNAGGLTDLNVTCWSFHLSDFTISADEVGSGFQHVDLTAGIAVVLEVRDISKMGVLLLLFVLLLLVVLRTISRMADVKTNLSKELEGKTDEVYLATGKSRNRPTLGALVQANPTPDTHHRHARKRLERRVKTTFRQHMMKRYRG 471          
BLAST of mRNA_Ecto-sp13_S_contig12989.2452.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 2.250e-84
Identity = 148/183 (80.87%), Postives = 161/183 (87.98%), Query Frame = 0
Query:    1 MTMRASMATPSSNSPSCAYYNENTGLWDEDGLVTEAATTPMDEGHAAGLTGLNVSCWSFHLSDFTISADEVGSGFQHVELTAGIAVALKVREISKTGVLVLLFVLLLLVVVRSASRMADVKTKLSKQLAGKTDEVYIATGKSRNRPTLAALVEADPTPDTHHRRARRRSKRRAKTTFRQHMIK 183
            MTMRASMAT  SNSPSC YYNE TGLWDEDGLVTEAA TPMDE +A GLTGLNV+CWSFHLSDFTISADEVGSGFQHV+LTAGIAV LKVREISK G L+LLFV     ++R+ +RMADVKT LSKQLA KTDEVY+ATGKSRNRPTLAALV+ADPTPDTHHR ARRR +RRAKT  RQ+M+K
Sbjct: 1257 MTMRASMATTLSNSPSCVYYNEITGLWDEDGLVTEAAITPMDESNADGLTGLNVTCWSFHLSDFTISADEVGSGFQHVDLTAGIAVFLKVREISKMGGLLLLFVXXXXXLLRTTARMADVKTNLSKQLARKTDEVYVATGKSRNRPTLAALVQADPTPDTHHRHARRRLQRRAKTAVRQYMMK 1439          
BLAST of mRNA_Ecto-sp13_S_contig12989.2452.1 vs. uniprot
Match: D7G3A1_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A1_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 6.540e-25
Identity = 69/168 (41.07%), Postives = 106/168 (63.10%), Query Frame = 0
Query:    1 MTMRASMATPSSNSPSCAYYNENTGLWDEDGLVTEAATTPMDEGHAAGLTGLNVSCWSFHLSDFTISADEVGSGFQHVELTAGIAVALKVREISKTGVLVLLFVLLLLVVVRSASRMADVKTKLSKQLAGKTDEVYIATGKSRNRPTLAALVEADPTPDTHHRRARRR 168
            +TMRASM T S+  PSC+YYNE TGLWD +GL   A   P+D G +A    + VSC +FHLSDF ++  E+ + FQ V L AG++V    R+++  G+++ +  L+LL +V S SR+AD ++K +++L  +  + YI TG  +  PTL  + +   T +  H+R R+R
Sbjct:  785 LTMRASM-TSSALLPSCSYYNEETGLWDSEGLAIGAVAVPIDAGDSA--LDVLVSCVTFHLSDFGVATTEIETVFQPVTLGAGLSVV-SGRDMTVWGLVLTVGALILLGIVWSVSRIADHRSKTAEKLQTRAYDHYIETGHPQRLPTLEDIKDLKQTLERKHKRRRKR 948          
BLAST of mRNA_Ecto-sp13_S_contig12989.2452.1 vs. uniprot
Match: D7G3A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A0_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.970e-23
Identity = 68/168 (40.48%), Postives = 104/168 (61.90%), Query Frame = 0
Query:    1 MTMRASMATPSSNSPSCAYYNENTGLWDEDGLVTEAATTPMDEGHAAGLTGLNVSCWSFHLSDFTISADEVGSGFQHVELTAGIAVALKVREISKTGVLVLLFVLLLLVVVRSASRMADVKTKLSKQLAGKTDEVYIATGKSRNRPTLAALVEADPTPDTHHRRARRR 168
            +TMRASM T S+  PSC+YYNE+TGLWD +GL   A     D   +A    + VSC +FHLSDF ++  EV   FQ V L AG++V  + REI+  G+++ +  L+LL +V S SR+AD ++K +++L  +  + YI TG  +  PTL  +++   T +  H+  R++
Sbjct:  740 LTMRASM-TSSAQLPSCSYYNEDTGLWDSEGLAIGAVAVLTDAADSA--VDVLVSCVTFHLSDFGVATTEVEPVFQPVTLGAGLSVV-RGREITAWGLVLTVGALILLGIVWSVSRIADHRSKTAERLQTRAYDHYIETGHPQRLPTLEDIMDLKQTLEKKHKTRRKK 903          
BLAST of mRNA_Ecto-sp13_S_contig12989.2452.1 vs. uniprot
Match: D7G398_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G398_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 2.020e-23
Identity = 70/168 (41.67%), Postives = 103/168 (61.31%), Query Frame = 0
Query:    1 MTMRASMATPSSNSPSCAYYNENTGLWDEDGLVTEAATTPMDEGHAAGLTGLNVSCWSFHLSDFTISADEVGSGFQHVELTAGIAVALKVREISKTGVLVLLFVLLLLVVVRSASRMADVKTKLSKQLAGKTDEVYIATGKSRNRPTLAALVEADPTPDTHHRRARRR 168
            +TMRASM T S+  PSC+YYNE+TGLWD +GL   A     D   +A    + VSC +FHLSDF ++  EV   FQ V L AG++V  K REI+  G+++ +  L+LL VV S SR+AD ++K +++L  +  + YI TG  +  PTL  + +   T +  H+  R++
Sbjct: 1193 LTMRASM-TSSAQLPSCSYYNEDTGLWDSEGLAIGAVAVLTDAADSA--VDVLVSCVTFHLSDFGVATTEVEPVFQPVTLGAGLSVV-KGREITVWGLVLTVGALILLGVVWSVSRIADHRSKTAERLQTRAYDHYIETGHPQRLPTLEDIKDLKQTLEKKHKTRRKK 1356          
BLAST of mRNA_Ecto-sp13_S_contig12989.2452.1 vs. uniprot
Match: D7FLQ3_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ3_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 4.570e-23
Identity = 67/168 (39.88%), Postives = 104/168 (61.90%), Query Frame = 0
Query:    1 MTMRASMATPSSNSPSCAYYNENTGLWDEDGLVTEAATTPMDEGHAAGLTGLNVSCWSFHLSDFTISADEVGSGFQHVELTAGIAVALKVREISKTGVLVLLFVLLLLVVVRSASRMADVKTKLSKQLAGKTDEVYIATGKSRNRPTLAALVEADPTPDTHHRRARRR 168
            +TMRASM T S+  PSC+YYNE TGLWD +GL   A   P+D G +A    + VSC +FHLSDF ++  E+ + FQ     AG++V    R+++  G+++ +  L+LL +V S SR+AD ++K +++L  +  + YI TG  +  PTL  + +   T +  H+R R+R
Sbjct:  163 LTMRASM-TSSALLPSCSYYNEETGLWDSEGLAIGAVAVPIDAGDSA--LDVLVSCVTFHLSDFGVATTEIETVFQP---GAGLSVV-SGRDMTVWGLVLTVGALILLGIVWSVSRIADYRSKTAEKLQTRAYDHYIETGHPQRLPTLEDIKDLKQTLERKHKRRRKR 323          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12989.2452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JLT2_9PHAE5.380e-9281.82GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4X3_ECTSI2.250e-8480.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3A1_ECTSI6.540e-2541.07GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G3A0_ECTSI1.970e-2340.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G398_ECTSI2.020e-2341.67GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLQ3_ECTSI4.570e-2339.88GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000203GPS motifPFAMPF01825GPScoord: 15..66
e-value: 4.7E-8
score: 33.4
IPR000203GPS motifPROSITEPS50221GPScoord: 14..73
score: 8.799
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 116..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..115
NoneNo IPR availableTMHMMTMhelixcoord: 97..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12989contigEcto-sp13_S_contig12989:2461..3942 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12989.2452.1mRNA_Ecto-sp13_S_contig12989.2452.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12989 2445..3974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12989.2452.1 ID=prot_Ecto-sp13_S_contig12989.2452.1|Name=mRNA_Ecto-sp13_S_contig12989.2452.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=201bp
MTMRASMATPSSNSPSCAYYNENTGLWDEDGLVTEAATTPMDEGHAAGLT
GLNVSCWSFHLSDFTISADEVGSGFQHVELTAGIAVALKVREISKTGVLV
LLFVLLLLVVVRSASRMADVKTKLSKQLAGKTDEVYIATGKSRNRPTLAA
LVEADPTPDTHHRRARRRSKRRAKTTFRQHMIKRWAGSKAHHQRKEDVEA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000203GPS