prot_Ecto-sp13_S_contig12985.2448.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12985.2448.1
Unique Nameprot_Ecto-sp13_S_contig12985.2448.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length80
Homology
BLAST of mRNA_Ecto-sp13_S_contig12985.2448.1 vs. uniprot
Match: A0A6H5KX57_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX57_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 4.840e-40
Identity = 74/80 (92.50%), Postives = 75/80 (93.75%), Query Frame = 0
Query:    1 PAKTLRGYQSRIANKCLHDNTIVVLPTGSGKTLLAAEVIKRLGPPALFLVPTCLLVDQQAEALGSWTRLSVAKYRGGAGL 80
            PAKTLRGYQSRIANKCLHDNTIVVLPTGSGKTLLAAE IKRLGPPALFLVPT L+VDQQAEALGSWT LSV KY GGAGL
Sbjct:   20 PAKTLRGYQSRIANKCLHDNTIVVLPTGSGKTLLAAEAIKRLGPPALFLVPTRLMVDQQAEALGSWTGLSVTKYMGGAGL 99          
BLAST of mRNA_Ecto-sp13_S_contig12985.2448.1 vs. uniprot
Match: A0A6H5L3L3_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L3_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 9.790e-24
Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = 0
Query:    1 PAKTLRGYQSRIANKCLHDNTIVVLPTGSGKTLLAAEVIKRLGPPALFLVPTCLLVDQQAEALGSWT-RLSVAKYRGG 77
            P +TLR YQSRIA  C  DNT+VVLPTGSGKT++AAEVIK+  P ALFLVPT  LV QQA+ L +WT R  +A+ RGG
Sbjct:   44 PERTLRPYQSRIARACERDNTLVVLPTGSGKTIIAAEVIKQRPPRALFLVPTRHLVKQQAKVLRAWTFRRRIAQLRGG 121          
BLAST of mRNA_Ecto-sp13_S_contig12985.2448.1 vs. uniprot
Match: A0A7S4V2U7_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V2U7_9DINO)

HSP 1 Score: 101 bits (252), Expect = 2.420e-23
Identity = 51/77 (66.23%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    5 LRGYQSRIANKC-LHDNTIVVLPTGSGKTLLAAEVIKRLGPPALFLVPTCLLVDQQAEALGSWTRLSVAKYRGGAGL 80
            LR YQSRI  +     NT+VVLPTG+GKTL+AAE+IKR+G   LFLVPTCLLV+QQA+A+G WT+LSV +Y GGA L
Sbjct:    3 LRPYQSRIVGQAEASGNTVVVLPTGAGKTLIAAELIKRVGGTCLFLVPTCLLVEQQAKAVGKWTKLSVGEYMGGATL 79          
BLAST of mRNA_Ecto-sp13_S_contig12985.2448.1 vs. uniprot
Match: A0A812RBN0_9DINO (DCL2A protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RBN0_9DINO)

HSP 1 Score: 100 bits (249), Expect = 6.220e-23
Identity = 50/77 (64.94%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    5 LRGYQSRIANKCLHD-NTIVVLPTGSGKTLLAAEVIKRLGPPALFLVPTCLLVDQQAEALGSWTRLSVAKYRGGAGL 80
            LRGYQ RI +  L   NTIVVLPTG+GKTL+A+E++KRLGP  LFLVPTCLLV+QQA+A+  WT L VA++ GGA +
Sbjct:   19 LRGYQQRIVDDALTTGNTIVVLPTGAGKTLIASELMKRLGPGCLFLVPTCLLVEQQAKAIREWTGLRVAEFMGGASM 95          
BLAST of mRNA_Ecto-sp13_S_contig12985.2448.1 vs. uniprot
Match: A0A1Q9EU77_SYMMI (Endoribonuclease Dicer-like 2a n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EU77_SYMMI)

HSP 1 Score: 99.4 bits (246), Expect = 1.580e-22
Identity = 48/77 (62.34%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    5 LRGYQSRIANKCLHD-NTIVVLPTGSGKTLLAAEVIKRLGPPALFLVPTCLLVDQQAEALGSWTRLSVAKYRGGAGL 80
            LR YQ+R+  + L   NT+VVLPTG+GKTL+A+E+I+RLGPP LFLVPTCLLV+QQA+A+  WT L VA++ GG  L
Sbjct:    3 LRAYQARLLEEILASGNTLVVLPTGAGKTLIASELIRRLGPPCLFLVPTCLLVEQQAKAVRDWTGLQVAEFMGGMSL 79          
BLAST of mRNA_Ecto-sp13_S_contig12985.2448.1 vs. uniprot
Match: A0A812TEW1_9DINO (DCL2A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TEW1_9DINO)

HSP 1 Score: 99.4 bits (246), Expect = 1.640e-22
Identity = 48/77 (62.34%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    5 LRGYQSRIANKCLHD-NTIVVLPTGSGKTLLAAEVIKRLGPPALFLVPTCLLVDQQAEALGSWTRLSVAKYRGGAGL 80
            LR YQ+R+  + L   NT+VVLPTG+GKTL+A+E+I+RLGPP LFLVPTCLLV+QQA+A+  WT L VA++ GG  L
Sbjct:    3 LRAYQARLLEEILASGNTLVVLPTGAGKTLIASELIRRLGPPCLFLVPTCLLVEQQAKAVRDWTGLQVAEFMGGMSL 79          
BLAST of mRNA_Ecto-sp13_S_contig12985.2448.1 vs. uniprot
Match: A0A2V3IZ19_9FLOR (Endoribonuclease Dicer-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ19_9FLOR)

HSP 1 Score: 87.4 bits (215), Expect = 2.430e-18
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 PAKTLRG--YQSRIANKCLHDNTIVVLPTGSGKTLLAAEVIKRLGPPALFLVPTCLLVDQQAEALGSWTRLSVAKYRGGAGL 80
            PA  LR   YQ RI ++ +  NT+VVLPTG+GKTL+A EVI+ L PPALF+VPT LLV QQ+EA+ + T   VA+  GG  L
Sbjct:    8 PAARLRPRPYQQRIIDQAVLKNTLVVLPTGAGKTLIATEVIRTLSPPALFIVPTVLLVKQQSEAIAAHTNYKVAQLHGGKSL 89          
BLAST of mRNA_Ecto-sp13_S_contig12985.2448.1 vs. uniprot
Match: A0A812IWI1_SYMPI (CFAP61 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IWI1_SYMPI)

HSP 1 Score: 80.5 bits (197), Expect = 7.090e-16
Identity = 42/72 (58.33%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    7 GYQSRIANKC-LHDNTIVVLPTGSGKTLLAAEVIKRLGPPALFLVPTCLLVDQQAEALGSWTRLSVAKYRGG 77
            GYQ RI  +     N IVVLPTG+GKTL+A+E+I  LGPP L  VPTC+LV+QQA A   WT L VA++ GG
Sbjct: 1997 GYQERIVTEVRAAGNAIVVLPTGAGKTLIASELITGLGPPCL--VPTCMLVEQQARAAREWTGLQVAEFMGG 2066          
BLAST of mRNA_Ecto-sp13_S_contig12985.2448.1 vs. uniprot
Match: A0A0L0FPA9_9EUKA (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FPA9_9EUKA)

HSP 1 Score: 65.9 bits (159), Expect = 6.570e-12
Identity = 38/80 (47.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query:    3 KTLRGYQSRIANKCLHDNTIVVLPTGSGKTLLAAEVIKRL-----GPPALFLVPTCLLVDQQAEALGSWTRLSVAKYRGG 77
            K LRGYQ RI  +    N+IVVLPTG+GKTL+A  +I  L         LF+VPT  L+DQQA  +   T L V    GG
Sbjct:   16 KQLRGYQERIVAEASERNSIVVLPTGTGKTLIACALILHLMRTRSARKTLFIVPTIALMDQQAAVIARETGLGVITMGGG 95          
BLAST of mRNA_Ecto-sp13_S_contig12985.2448.1 vs. uniprot
Match: A0A836C8Q2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Q2_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.480e-11
Identity = 41/78 (52.56%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    5 LRGYQSRIANKCLHDNTIVVLPTGSGKTLLAAEVI-----KRLGPPALFLVPTCLLVDQQAEALGSWTRLSVAKYRGG 77
            LRGYQ RI       N +VVLPTG+GKTL+AAE I     K+    ALFLVPT  LV QQA+ +   T L VA+ +GG
Sbjct:   28 LRGYQERICMDMAKGNHLVVLPTGAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLDVAELKGG 105          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12985.2448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KX57_9PHAE4.840e-4092.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L3L3_9PHAE9.790e-2465.38Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S4V2U7_9DINO2.420e-2366.23Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A812RBN0_9DINO6.220e-2364.94DCL2A protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A1Q9EU77_SYMMI1.580e-2262.34Endoribonuclease Dicer-like 2a n=3 Tax=Symbiodiniu... [more]
A0A812TEW1_9DINO1.640e-2262.34DCL2A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A2V3IZ19_9FLOR2.430e-1856.10Endoribonuclease Dicer-like n=1 Tax=Gracilariopsis... [more]
A0A812IWI1_SYMPI7.090e-1658.33CFAP61 protein n=1 Tax=Symbiodinium pilosum TaxID=... [more]
A0A0L0FPA9_9EUKA6.570e-1247.50Helicase ATP-binding domain-containing protein (Fr... [more]
A0A836C8Q2_9STRA1.480e-1152.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..79
e-value: 7.2E-18
score: 66.7
NoneNo IPR availablePANTHERPTHR14074HELICASE WITH DEATH DOMAIN-RELATEDcoord: 3..62
NoneNo IPR availablePANTHERPTHR14074:SF16DICER RELATED HELICASEcoord: 3..62
IPR006935Helicase/UvrB, N-terminalPFAMPF04851ResIIIcoord: 9..63
e-value: 1.7E-7
score: 31.4
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 12..80
score: 10.968
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12985contigEcto-sp13_S_contig12985:567..806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12985.2448.1mRNA_Ecto-sp13_S_contig12985.2448.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12985 567..806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12985.2448.1 ID=prot_Ecto-sp13_S_contig12985.2448.1|Name=mRNA_Ecto-sp13_S_contig12985.2448.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=80bp
PAKTLRGYQSRIANKCLHDNTIVVLPTGSGKTLLAAEVIKRLGPPALFLV
PTCLLVDQQAEALGSWTRLSVAKYRGGAGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006935Helicase/UvrB_N
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase