prot_Ecto-sp13_S_contig1298.2445.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1298.2445.1
Unique Nameprot_Ecto-sp13_S_contig1298.2445.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length710
Homology
BLAST of mRNA_Ecto-sp13_S_contig1298.2445.1 vs. uniprot
Match: D7FWK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK2_ECTSI)

HSP 1 Score: 684 bits (1766), Expect = 2.350e-229
Identity = 492/603 (81.59%), Postives = 504/603 (83.58%), Query Frame = 0
Query:  117 ESAAGVFSAFQFMAEPAAPSDKAAPIGGSPPSAGGGGQGMSAFSFLTEESPAAADSVGGPDETVGI-LGDAAGKTTPSSFSFLSEGGEGGPAPESSIAAEAASSVVSSSSPLAATGNAVLPASSDRKAAPEVGGAAGQTPGDADQQPAGSSGLESEVSSPSASSSTTARAGG-----GLASTVTAAQEGADKQPAADDVPSWKPSAGVVRKKRTVRRVGYAREETLASSSMAPPVPRSPTAGRQAGSGNASTEAAGDQTSGSKPSATAGGGVSRGGGGDYEAPSVPIPTRKASTSPMIAGREAMDDSMVAEAAAMAALAASMAPSEIQGAMAKGDMKQGSSHGTASXXXXXXXXXXXXXXXXXXXXXSLSNPHPTAMKKNHSFMTKFKGLLSQSSSSKSDSSPLSPLAAARKSATNPTMATTPRSSPKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VVRPAFSGEEENGAVQEMRAELSILIDAFQQKSESLSKRLTEAAAEKAALECSRTSLGNSHAEGIRRLAEAESEQQRLADEEDYEKAAELSMEIENLREESGSAARRLRR--EDGGSLDRSSAEARQELLAAVEETTR 710
            ESAAGVFSAFQFMAEPAAPSDKAAPIGGSPPSAGGGG GMSAFSFLT+ESPAA +SV G DETV I  GDAAG+TTPSSFSFLSEG                      SSPLAATG A LPASSD KAA E GGAAGQTPGD DQQPAGSSGL SEVSSPSASSSTTARA G             AQEGA+K+PAADDVPSWKPSA VVRKKR VRRVGYAREETLASSSMAPPVPRSPTAGRQAG GNASTEAAGDQTSGS PSATA  G+SRGGGGDYEAPSVPIP+RK +TSPM AGREAMDDSMVAEAAAMAALAASMAPSEIQGAMAKGD+KQGSSHGTASXXXXXXXXXXXXX        SLSNPHPTA KKNHSFMTKFKGLLSQSSSSKSDSSPLSP A                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VVRPAFSGEEENGAVQEMRAELS+LIDAFQQKSESLS RLTEAAAEKAALECSRTSL NSHAEGIRRLAEAESEQQRLADEEDYEKAAELS+EIENL+EES SAARRLR   EDGGSLDRSSAEAR ELL AVEETTR
Sbjct:   16 ESAAGVFSAFQFMAEPAAPSDKAAPIGGSPPSAGGGGPGMSAFSFLTDESPAAGNSVEGQDETVSIPAGDAAGRTTPSSFSFLSEGXXXXXXXXXXXXXXXXXXXXXXSSPLAATGKAELPASSDGKAAAEFGGAAGQTPGDVDQQPAGSSGLASEVSSPSASSSTTARADGLXXXXXXXXXXXXAQEGAEKKPAADDVPSWKPSASVVRKKRAVRRVGYAREETLASSSMAPPVPRSPTAGRQAGGGNASTEAAGDQTSGSTPSATAXXGLSRGGGGDYEAPSVPIPSRKVTTSPMTAGREAMDDSMVAEAAAMAALAASMAPSEIQGAMAKGDLKQGSSHGTASXXXXXXXXXXXXX--------SLSNPHPTATKKNHSFMTKFKGLLSQSSSSKSDSSPLSPHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVRPAFSGEEENGAVQEMRAELSVLIDAFQQKSESLSNRLTEAAAEKAALECSRTSLRNSHAEGIRRLAEAESEQQRLADEEDYEKAAELSLEIENLKEESASAARRLRELEEDGGSLDRSSAEARHELLVAVEETTR 610          
BLAST of mRNA_Ecto-sp13_S_contig1298.2445.1 vs. uniprot
Match: A0A6H5J5M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5M4_9PHAE)

HSP 1 Score: 536 bits (1381), Expect = 5.410e-184
Identity = 314/367 (85.56%), Postives = 323/367 (88.01%), Query Frame = 0
Query:   21 MFRSLFGTTVAGEYGDTGTAGGRPGNLSGQEQAARKGTPNKTAAGAGSSSAQQDGGGFFQLEPTHASAEESLFDDLEVKPPAVEPKPSPMKPPADSESAAGVFSAFQFMAEPAAPSDKAAPIGGSPPSAGGGGQGMSAFSFLTEESPAAADSVGGPDETVGILGDAAGKTTPSSFSFLSEGGEGGPAPESSIAAEAASSVVSSSSPLAATGNAVLPASSDRKAAPEVGGAAGQTPGDADQQPAGSSGLESEVSSPSASSSTTARAGGGLASTVTAAQEGADKQPAADDVPSWKPSAGVVRKKRTVRRVGYAREETLASSSMAPPVPRSPTAGRQAGSGNASTEAAGDQTSGSKPSATAGGGVSRGGG 387
            MFRSLFGTTVAGEYGDTGT GGR GN SGQEQAARKGTPNKTA G GSSSA QDGGGFFQLEPTHASAEESLFDDLEVKPPAVEPKPSPMKPPADSESAAGVFSAFQFMAEPAA SDKA P+GGSPPSAGGGGQGMSAFSFLTEESPAA +S  G DETV I GDAAGKTTPSSFSFLSEGG GGPA ES +AAEAA S+VSSSSPLAATGN VLPA SD K + EVGG AGQTPGD DQQPA SSGL S+VSSPSASSSTTA+AGG LA+T TAAQEGADKQPAADDVPSWKPSAGVVRKKR VRRVGYAREETLASS MAPPVPRSPTAGRQ GSGNASTEAAGDQ            G+SRGGG
Sbjct:    1 MFRSLFGTTVAGEYGDTGTTGGRRGNPSGQEQAARKGTPNKTAPGGGSSSAHQDGGGFFQLEPTHASAEESLFDDLEVKPPAVEPKPSPMKPPADSESAAGVFSAFQFMAEPAAASDKATPVGGSPPSAGGGGQGMSAFSFLTEESPAAGESGEGQDETVSIPGDAAGKTTPSSFSFLSEGGGGGPATESRVAAEAAPSLVSSSSPLAATGNVVLPAPSDGKESAEVGGIAGQTPGDVDQQPAVSSGLASDVSSPSASSSTTAQAGG-LAATATAAQEGADKQPAADDVPSWKPSAGVVRKKRAVRRVGYAREETLASSLMAPPVPRSPTAGRQPGSGNASTEAAGDQXXXXXXXXXXXXGISRGGG 366          
BLAST of mRNA_Ecto-sp13_S_contig1298.2445.1 vs. uniprot
Match: A0A6H5J4P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4P3_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 2.740e-117
Identity = 253/329 (76.90%), Postives = 259/329 (78.72%), Query Frame = 0
Query:  407 MIAGREAMDDSMVAEAAAMAALAASMAPSEIQGAMAKGDMKQGSSHGTASXXXXXXXXXXXXXXXXXXXXXSLSNPHPTAMKKNHSFMTKFKGLLSQSSSSKSDSSPLSPLAAARKSATNPTMATTPRSSPKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVRPAFSGEEENGAVQEMRAELSILIDAFQQKSESLSKRLTEAAAEKAALECSRTSLGNSHAEGIRRLAEAESEQQRLADEEDYEKAAELSMEIENLREESGSAARRLRR-------------------------EDGGSLDRSSAEARQELLAAVEETTR 710
            M AGREAMDDSMVAEAAAMAALAASMAPSEIQGAMAKGD+KQGSSHGTASXXXXXXXXXXXXXXXXXX   SLSNPHPTAMKKNHSFMTKFKGLLSQSSSSKSDSSPLSPLAAAR+SATNPT+A TPRSSPKDA                                  VVRPAFSG EENGAVQEMRAELS+LIDAFQQKSESLS RLTE A EKAALECSRTSLG+SHAEGIRRLAEAE EQQRLADEEDYEKAAELS+EIENLREES SAARRLRR                         EDGGSLDRSSAEARQELLAAVEETTR
Sbjct:    1 MTAGREAMDDSMVAEAAAMAALAASMAPSEIQGAMAKGDLKQGSSHGTASXXXXXXXXXXXXXXXXXXMA-SLSNPHPTAMKKNHSFMTKFKGLLSQSSSSKSDSSPLSPLAAARESATNPTVAYTPRSSPKDAAAGAGTAKAGEDHPPSRSERGGTDPDSAAGGGSSVVRPAFSGGEENGAVQEMRAELSVLIDAFQQKSESLSNRLTEVAVEKAALECSRTSLGSSHAEGIRRLAEAEFEQQRLADEEDYEKAAELSLEIENLREESASAARRLRRVIRSRDDTEESMRKALALTTPLELEEDGGSLDRSSAEARQELLAAVEETTR 328          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1298.2445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FWK2_ECTSI2.350e-22981.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J5M4_9PHAE5.410e-18485.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5J4P3_9PHAE2.740e-11776.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 600..620
NoneNo IPR availableCOILSCoilCoilcoord: 654..681
IPR001943UVR domainPFAMPF02151UVRcoord: 640..673
e-value: 2.5E-4
score: 20.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1298contigEcto-sp13_S_contig1298:11792..17959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1298.2445.1mRNA_Ecto-sp13_S_contig1298.2445.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1298 11792..17959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1298.2445.1 ID=prot_Ecto-sp13_S_contig1298.2445.1|Name=mRNA_Ecto-sp13_S_contig1298.2445.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=710bp
GTFATAAISNCARSPTTHSTMFRSLFGTTVAGEYGDTGTAGGRPGNLSGQ
EQAARKGTPNKTAAGAGSSSAQQDGGGFFQLEPTHASAEESLFDDLEVKP
PAVEPKPSPMKPPADSESAAGVFSAFQFMAEPAAPSDKAAPIGGSPPSAG
GGGQGMSAFSFLTEESPAAADSVGGPDETVGILGDAAGKTTPSSFSFLSE
GGEGGPAPESSIAAEAASSVVSSSSPLAATGNAVLPASSDRKAAPEVGGA
AGQTPGDADQQPAGSSGLESEVSSPSASSSTTARAGGGLASTVTAAQEGA
DKQPAADDVPSWKPSAGVVRKKRTVRRVGYAREETLASSSMAPPVPRSPT
AGRQAGSGNASTEAAGDQTSGSKPSATAGGGVSRGGGGDYEAPSVPIPTR
KASTSPMIAGREAMDDSMVAEAAAMAALAASMAPSEIQGAMAKGDMKQGS
SHGTASSSTSSAAGGGAAAAAAAAAAASLSNPHPTAMKKNHSFMTKFKGL
LSQSSSSKSDSSPLSPLAAARKSATNPTMATTPRSSPKDAAAAAATTKAG
EDHPPSRSERGGADPDSAAGGGSSVVRPAFSGEEENGAVQEMRAELSILI
DAFQQKSESLSKRLTEAAAEKAALECSRTSLGNSHAEGIRRLAEAESEQQ
RLADEEDYEKAAELSMEIENLREESGSAARRLRREDGGSLDRSSAEARQE
LLAAVEETTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001943UVR_dom