prot_Ecto-sp13_S_contig12977.2442.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12977.2442.1
Unique Nameprot_Ecto-sp13_S_contig12977.2442.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length76
Homology
BLAST of mRNA_Ecto-sp13_S_contig12977.2442.1 vs. uniprot
Match: D7G7G0_ECTSI (Alpha-SNAP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7G0_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 6.910e-38
Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 0
Query:    1 PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQTGLCLLAQGDTVAARNKQSDFTSVDYTFHDSREYRLVARI 73
            PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQ GLCLLAQGDTVAARNKQSDFTS DYTF DSREYR + ++
Sbjct:  176 PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQAGLCLLAQGDTVAARNKQSDFTSADYTFDDSREYRFLDQL 248          
BLAST of mRNA_Ecto-sp13_S_contig12977.2442.1 vs. uniprot
Match: A0A6T8LLA3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8LLA3_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.710e-16
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    1 PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQTGLCLLAQGDTVAARNKQSDFTSVDYTFHDSREYRLVA 71
            P+L   AEIYE LGR C+E  LL  NAKGY+LQ+ LC LA GD +AA    S F S+D+TF +SRE + V+
Sbjct:  188 PDLLKGAEIYENLGRECLENNLLKYNAKGYFLQSCLCHLANGDAIAASQSLSRFESLDFTFGESREGKFVS 258          
BLAST of mRNA_Ecto-sp13_S_contig12977.2442.1 vs. uniprot
Match: A0A7S2IBT3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IBT3_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 3.690e-15
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    1 PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQTGLCLLAQGDTVAARNKQSDFTSVDYTFHDSREYRLVARI 73
            P+L  AA++YE+LGR C+E  LL  NAKGY+LQ+ +C LA GD + A    S F  +DYTF DSRE +   ++
Sbjct:  190 PDLLRAAQLYEELGRHCLETNLLKFNAKGYFLQSVMCHLANGDAIGAGQGLSKFEGLDYTFADSREGKFAKQL 262          
BLAST of mRNA_Ecto-sp13_S_contig12977.2442.1 vs. uniprot
Match: A0A7S4TA13_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TA13_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 6.240e-15
Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    1 PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQTGLCLLAQGDTVAARNKQSDFTSVDYTFHDSREYRLVARIFRT 76
            P+L  AA++YE+LGR C+E  LL  NAKGY+LQ+ +C LA GD +      S F  +DYTF DSRE +   ++  T
Sbjct:  217 PDLLRAAQLYEELGRHCLETNLLKFNAKGYFLQSVMCHLANGDAIGGGQGLSKFEGLDYTFADSREGKFARQLVET 292          
BLAST of mRNA_Ecto-sp13_S_contig12977.2442.1 vs. uniprot
Match: A0A1Z5JPI2_FISSO (Alpha-soluble NSF attachment protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPI2_FISSO)

HSP 1 Score: 75.9 bits (185), Expect = 1.310e-14
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 0
Query:    1 PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQTGLCLLAQGDTVAARNKQSDFTSVDYTFHDSREYRLVARI 73
            P+L  A+++YE LGR+C++  LL  NAKGY+LQ  LC LA  D V  R   S F  +DYTF DSRE +   ++
Sbjct:  186 PDLLRASQLYEDLGRNCLDSNLLKFNAKGYFLQAVLCHLANNDAVGGREALSRFEGLDYTFSDSREGKFATQL 258          
BLAST of mRNA_Ecto-sp13_S_contig12977.2442.1 vs. uniprot
Match: A0A836CLW2_9STRA (Alpha-SNAP n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLW2_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.710e-14
Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    1 PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQTGLCLLAQGDTVAARNKQSDFTSVDYTFHDSREYRLV 70
            P+   AA+I+E LGRSC   +LL MNAKGY+ Q  LCL+A  D+VAAR K  +F SVD+TF  SRE +  
Sbjct:  179 PDYMGAAKIFEDLGRSCTSTRLLQMNAKGYFQQAVLCLMAANDSVAARLKLDEFKSVDFTFGASRECKFA 248          
BLAST of mRNA_Ecto-sp13_S_contig12977.2442.1 vs. uniprot
Match: A0A7S1CZ61_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZ61_CYCTE)

HSP 1 Score: 73.9 bits (180), Expect = 7.240e-14
Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    1 PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQTGLCLLAQGDTVAARNKQSDFTSVDYTFHDSREYRLVARI 73
            P+LT AA++Y+ LGR C++  LL  NAKGY+LQ   C LAQGD VA       + ++DYTF  SRE +  +++
Sbjct:  196 PDLTRAAQLYDDLGRRCLDSNLLKFNAKGYFLQAIFCHLAQGDAVAVTQSIQRYEALDYTFGGSREGKFASQL 268          
BLAST of mRNA_Ecto-sp13_S_contig12977.2442.1 vs. uniprot
Match: A0A7S2WGN8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WGN8_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.280e-13
Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    1 PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQTGLCLLAQGDTVAARNKQSDFTSVDYTFHDSRE 66
            P+L  AAEIYE LG+ C++  LL  NAKGY+LQ  LC L  GD++AA      + + DYTF DSRE
Sbjct:  183 PDLIRAAEIYEDLGKQCLDNNLLKYNAKGYFLQAILCHLGNGDSIAATQATQRYEAWDYTFGDSRE 248          
BLAST of mRNA_Ecto-sp13_S_contig12977.2442.1 vs. uniprot
Match: A0A7S3P3Z3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P3Z3_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 6.450e-13
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    1 PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQTGLCLLAQGDTVAARNKQSDFTSVDYTFHDSRE 66
            P+L  A +IY++LGR+C++  LL  NAKGY+LQ+ LC LA  D + A      +  VDYTF +SRE
Sbjct:  183 PDLLKAGQIYDELGRNCLDSNLLKFNAKGYFLQSILCQLANSDAIGAEQALQRYEGVDYTFSESRE 248          
BLAST of mRNA_Ecto-sp13_S_contig12977.2442.1 vs. uniprot
Match: A0A7S1YCT5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YCT5_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 6.500e-13
Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    1 PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQTGLCLLAQGDTVAARNKQSDFTSVDYTFHDSREYRLVARI 73
            P+L  AA +Y+ LGRS ++  +L  +AKGY+LQT LC LA GD++A R   + + ++DYTF  SRE +  A++
Sbjct:  184 PDLLRAAGLYDSLGRSSLDSNMLKFHAKGYFLQTILCHLANGDSIAGRQAVTRYEALDYTFGTSREGKFAAQL 256          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12977.2442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7G7G0_ECTSI6.910e-3889.04Alpha-SNAP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
A0A6T8LLA3_9STRA2.710e-1654.93Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2IBT3_9STRA3.690e-1549.32Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4TA13_9STRA6.240e-1547.37Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A1Z5JPI2_FISSO1.310e-1447.95Alpha-soluble NSF attachment protein n=2 Tax=Fistu... [more]
A0A836CLW2_9STRA1.710e-1454.29Alpha-SNAP n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S1CZ61_CYCTE7.240e-1446.58Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2WGN8_9STRA1.280e-1353.03Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S3P3Z3_9STRA6.450e-1348.48Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1YCT5_9STRA6.500e-1345.21Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..76
e-value: 2.6E-18
score: 68.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 5..74
NoneNo IPR availablePFAMPF14938SNAPcoord: 3..74
e-value: 1.8E-21
score: 76.8
NoneNo IPR availablePANTHERPTHR13768:SF8ALPHA-SOLUBLE NSF ATTACHMENT PROTEINcoord: 6..74
IPR000744NSF attachment proteinPANTHERPTHR13768SOLUBLE NSF ATTACHMENT PROTEIN SNAPcoord: 6..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12977contigEcto-sp13_S_contig12977:142..922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12977.2442.1mRNA_Ecto-sp13_S_contig12977.2442.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12977 142..922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12977.2442.1 ID=prot_Ecto-sp13_S_contig12977.2442.1|Name=mRNA_Ecto-sp13_S_contig12977.2442.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=76bp
PNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQTGLCLLAQGDTVAARNK
QSDFTSVDYTFHDSREYRLVARIFRT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR000744NSF_attach