prot_Ecto-sp13_S_contig12976.2441.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12976.2441.1
Unique Nameprot_Ecto-sp13_S_contig12976.2441.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length140
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12976.2441.1 vs. uniprot
Match: A0A6H5JPK1_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK1_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 6.550e-15
Identity = 56/65 (86.15%), Postives = 57/65 (87.69%), Query Frame = 0 
Query:   78 MAEMREALAAMKASLDAANGQVRQVQAEKEDREAXXXXXXGEPT--SNGGGQTPAGDSLPAESAT 140
            MAEMREALAAMKASLDAANGQVRQ+QAEKEDREA XXXXX      S GGGQTPAGDSLPAESAT
Sbjct:    1 MAEMREALAAMKASLDAANGQVRQLQAEKEDREAAXXXXXXXXXXXSTGGGQTPAGDSLPAESAT 65
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12976.2441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JPK1_9PHAE6.550e-1586.15Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12976contigEcto-sp13_S_contig12976:167..2474 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12976.2441.1mRNA_Ecto-sp13_S_contig12976.2441.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12976 167..2474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12976.2441.1 ID=prot_Ecto-sp13_S_contig12976.2441.1|Name=mRNA_Ecto-sp13_S_contig12976.2441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=140bp
SRRHQRGQRQGGATGRGGSPNSPMPPATRSRSGGTPAGRGRGRAAPRSTS
VTARRTPTRGRTRSAAPLRSSGASAADMAEMREALAAMKASLDAANGQVR
QVQAEKEDREAAAAAAAGEPTSNGGGQTPAGDSLPAESAT
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