prot_Ecto-sp13_S_contig12971.2440.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig12971.2440.1
Unique Name	prot_Ecto-sp13_S_contig12971.2440.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	242

Homology

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BLAST of mRNA_Ecto-sp13_S_contig12971.2440.1 vs. uniprot
Match: D7FYF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF0_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 2.110e-72
Identity = 203/230 (88.26%), Postives = 205/230 (89.13%), Query Frame = 0

Query:    1 MQPGQKLQPPGGR-QSRPGPEARAPGPARLGAAVDAIVGHLRRLVLLQAWAKWQPKLTQGEVASRILERQRLRLEERGGEASGAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SAPESDGETLARAGGGGDQEGPPGARVRGRTRLRPPG-GEIGALTASARSTALGGSGGVVRCRPSPAGASRGLNAAREVFRSSDGRAGRAAGGR 225
            MQPGQK+QPP GR Q RPGPEA APGPARLGAAVDAIVGHLRRLVLLQAWAKWQPKLTQGEVA+RILERQRLRLE RG EASGAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      SAP SDGETLARAGGGGDQEG PGA VRGRTRLRP G G IGA TASA STALGGSGGVVRCR SPAGASRGLNAAREVFR S G  GRAAGGR
Sbjct:    1 MQPGQKMQPPSGRRQLRPGPEAPAPGPARLGAAVDAIVGHLRRLVLLQAWAKWQPKLTQGEVATRILERQRLRLEGRGDEASGAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEGRQSAPGSDGETLARAGGGGDQEGTPGAGVRGRTRLRPSGVGGIGATTASATSTALGGSGGVVRCRSSPAGASRGLNAAREVFRGSGGSVGRAAGGR 230

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BLAST of mRNA_Ecto-sp13_S_contig12971.2440.1 vs. uniprot
Match: A0A6H5KA79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA79_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 1.160e-61
Identity = 154/242 (63.64%), Postives = 157/242 (64.88%), Query Frame = 0

Query:    1 MQPGQKLQPPGGRQSRPGPEARAPGPARLGAAVDAIVGHLRRLVLLQAWAKWQPKLTQGEVASRILERQRLRLEERGGEASGAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPESDGETLARAGGGGDQEGPPGARVRGRTRLRPPGGEIGALTASARSTALGGSGGVVRCRPSPAGASRGLNAAREVFRSSDGRAGRAAGGRTASGGGVAGAMAAEVQQ 242
            MQPGQK++P G RQSRPGPEA APGP RLGAAVDAIVGHLRRLVLLQAWAKWQPKLTQ           RLRLE RGGE         XXXXXX                                      SAP SDGETLARA GGGDQEG PGA VRGR RLRP G  IGALTAS+RSTALGGSGGVVRCR SPAG SRGLNA RE FRSS G A RAAGG      GVAGAMAAE QQ
Sbjct:    1 MQPGQKMKPSGRRQSRPGPEAPAPGPVRLGAAVDAIVGHLRRLVLLQAWAKWQPKLTQ-----------RLRLEGRGGELGHGAACEEXXXXXXDDEAEGRQ------------------------------SAPGSDGETLARASGGGDQEGVPGAGVRGRARLRPTGRRIGALTASSRSTALGGSGGVVRCRSSPAGTSRGLNADREAFRSSGGSARRAAGG------GVAGAMAAETQQ 195

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig12971.2440.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig12971.2440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FYF0_ECTSI	2.110e-72	88.26	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KA79_9PHAE	1.160e-61	63.64	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 237..242

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig12971	contig	Ecto-sp13_S_contig12971:2820..4051 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig12971.2440.1	mRNA_Ecto-sp13_S_contig12971.2440.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig12971 2820..4061 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig12971.2440.1 ID=prot_Ecto-sp13_S_contig12971.2440.1|Name=mRNA_Ecto-sp13_S_contig12971.2440.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
MQPGQKLQPPGGRQSRPGPEARAPGPARLGAAVDAIVGHLRRLVLLQAWA
KWQPKLTQGEVASRILERQRLRLEERGGEASGAEPPTAAAAAGRRWRRAG
GQSRRAGGKLRDGPAGEEEEEDDGDDEAEGQQSAPESDGETLARAGGGGD
QEGPPGARVRGRTRLRPPGGEIGALTASARSTALGGSGGVVRCRPSPAGA
SRGLNAAREVFRSSDGRAGRAAGGRTASGGGVAGAMAAEVQQ