prot_Ecto-sp13_S_contig12962.2433.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12962.2433.1
Unique Nameprot_Ecto-sp13_S_contig12962.2433.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length295
Homology
BLAST of mRNA_Ecto-sp13_S_contig12962.2433.1 vs. uniprot
Match: D8LF11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF11_ECTSI)

HSP 1 Score: 486 bits (1250), Expect = 9.190e-172
Identity = 263/295 (89.15%), Postives = 265/295 (89.83%), Query Frame = 0
Query:    1 MVALRRGAGVFQRGLRQQSRPRGSACLSKQTKAPRACNTACTAFSVAGFDSRSSPTAGRWSACVSVHRNEHLRPLVSPAVPVAVALRSVQHLSSSGRGGREKRGGADKPRRSNTSNNSREGKEKEKEG-YTFLEKDDLGRLSNESKGGLKTDTAAARGAEEEVDAANVTLWQRWKQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQDNPSVTWLQNTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPKTKT 294
            MVALRRGAGVFQRGLRQQSRPRGSACLS+Q K PRACNTA    SVA F SRSSPTAGRWSACVSVHRNE LRPLVSP VPVAVALRSVQHLSSSGRGGREKRGGADK RRSNT               YTFLEKDDLGRLSNE K GLKTDTAAARGAEE+VDA NVTLWQRWKQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQDNPSVTWLQNTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPK KT
Sbjct:    5 MVALRRGAGVFQRGLRQQSRPRGSACLSQQAKVPRACNTA---VSVASFGSRSSPTAGRWSACVSVHRNEDLRPLVSPVVPVAVALRSVQHLSSSGRGGREKRGGADKRRRSNTXXXXXXXXXXXXXXEYTFLEKDDLGRLSNEPKSGLKTDTAAARGAEEKVDATNVTLWQRWKQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQDNPSVTWLQNTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPKAKT 296          
BLAST of mRNA_Ecto-sp13_S_contig12962.2433.1 vs. uniprot
Match: A0A8K1C653_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C653_PYTOL)

HSP 1 Score: 62.8 bits (151), Expect = 5.760e-8
Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 0
Query:  171 QRWKQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAI----QVLADY-IGAQDNPSVTWLQNT--------IKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAP 289
            ++ K   +K+K LW+QYG+V +GTY  +YF  L  IYV ++ G V++   TS +     +  AD+ +    N  VTW ++          + N K  + + A +  +  E  R  V +A TP IAR +GRAP
Sbjct:   87 EKGKSGWSKLKELWRQYGMVAVGTYFSMYFTVLGSIYVAIEQGWVSTK-RTSRSEGENGEANADFNVVTATNKVVTWAEDMGIAKHLDLQRVNAKTGSFVIAWVATKFTEPLRLAVTLAITPRIARLVGRAP 217          
BLAST of mRNA_Ecto-sp13_S_contig12962.2433.1 vs. uniprot
Match: M4BYX8_HYAAE (DUF1279 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYX8_HYAAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.700e-6
Identity = 40/127 (31.50%), Postives = 60/127 (47.24%), Query Frame = 0
Query:  179 KMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDV----------DTSHAIQVLADYIGAQDNPSVTWLQNTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAP---PKT 292
            ++K LW++YG V +GTY  LY   L  IY+ +D G V +D           +    +     ++   ++  +       + N K  + L A I  +  E  R  + +AATP IAR LGRAP   PKT
Sbjct:   92 RLKDLWRKYGAVAMGTYFSLYGAVLGSIYLAIDQGWVHTDTGRNSNDKPSDENFDLVSTTNKFVKWAEDLGIAQYLEVERVNAKTGSFLLAWIATKFTEPLRLALTVAATPRIARFLGRAPKLPPKT 218          
BLAST of mRNA_Ecto-sp13_S_contig12962.2433.1 vs. uniprot
Match: D7FNZ5_ECTSI (DUF1279 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNZ5_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 8.850e-6
Identity = 39/125 (31.20%), Postives = 66/125 (52.80%), Query Frame = 0
Query:  174 KQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQDNPSVTWLQN-------TIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPK 291
            K++  +++ LW++YG V IGTY  +YFG +A  Y + D G++ S      A+    +++      +  W Q         +  + +A + + A    +++E  R + AIA TP +ARALGRAP K
Sbjct:  324 KESSNRLQDLWRKYGAVGIGTYFGIYFGSIAVFYGIYDYGVLTSLPSGGTAV---IEHMQEWMKSAPEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAPAK 445          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12962.2433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LF11_ECTSI9.190e-17289.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1C653_PYTOL5.760e-833.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BYX8_HYAAE2.700e-631.50DUF1279 domain-containing protein n=1 Tax=Hyaloper... [more]
D7FNZ5_ECTSI8.850e-631.20DUF1279 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..210
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 211..294
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..186
NoneNo IPR availableTMHMMTMhelixcoord: 187..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12962contigEcto-sp13_S_contig12962:2229..4869 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12962.2433.1mRNA_Ecto-sp13_S_contig12962.2433.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12962 1641..4879 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12962.2433.1 ID=prot_Ecto-sp13_S_contig12962.2433.1|Name=mRNA_Ecto-sp13_S_contig12962.2433.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=295bp
MVALRRGAGVFQRGLRQQSRPRGSACLSKQTKAPRACNTACTAFSVAGFD
SRSSPTAGRWSACVSVHRNEHLRPLVSPAVPVAVALRSVQHLSSSGRGGR
EKRGGADKPRRSNTSNNSREGKEKEKEGYTFLEKDDLGRLSNESKGGLKT
DTAAARGAEEEVDAANVTLWQRWKQARAKMKLLWKQYGLVWIGTYTVLYF
GGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQDNPSVTWLQNTIKTN
PKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPKTKT*
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