prot_Ecto-sp13_S_contig12962.2432.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12962.2432.1
Unique Nameprot_Ecto-sp13_S_contig12962.2432.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length136
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12962.2432.1 vs. uniprot
Match: A0A6H5K3C7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C7_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 3.670e-82
Identity = 127/135 (94.07%), Postives = 132/135 (97.78%), Query Frame = 0 
Query:    1 MLKVGWTVEQQTSERLRNEAGVPVLVHSCSDEKTLTAAAGHVVKGANGNVCAVVHSWDCGVEARRLLVEARETAPPDEGRAARQPSVEVICTAEVGEDLFQFVRWQLLSGATTEQVQQGLDDLFGAFYETEQEKP 135
            MLKVGWTVE+QTSERLRNEAGVPVLVHSCSDEKTLTAAAGHVV+GANG VCAVVH+WDCGVEARRLLVEARET  P+EGRAARQPSVEVICTAEVGEDLFQFVRWQLLSGATT+QVQQGLDDLFGAFYETEQEKP
Sbjct:  395 MLKVGWTVERQTSERLRNEAGVPVLVHSCSDEKTLTAAAGHVVEGANGKVCAVVHNWDCGVEARRLLVEARETVLPNEGRAARQPSVEVICTAEVGEDLFQFVRWQLLSGATTDQVQQGLDDLFGAFYETEQEKP 529
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BLAST of mRNA_Ecto-sp13_S_contig12962.2432.1 vs. uniprot
Match: D8LF10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF10_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 3.270e-75
Identity = 123/134 (91.79%), Postives = 126/134 (94.03%), Query Frame = 0 
Query:    1 MLKVGWTVEQQTSERLRNEAGVPVLVHSCSDEKTLTAAAGHVVKGANGNVCAVVHSWDCGVEARRLLVEARETAPPDEGRAARQPSVEVICTAEVGEDLFQFVRWQLLSGATTEQVQQGLDDLFGAFYETEQEK 134
            MLKVGW +E+QTSERLRNEAGVPVLVHSCSDEKTLTAAAGHVVKGAN  VCAVVHSWDCGVEARRLLV ARET  PDEGRAARQP  EVICTAEVGEDLFQFVRWQLLSGATTEQVQQGLDDLFGAFYETE+EK
Sbjct:  549 MLKVGWAIERQTSERLRNEAGVPVLVHSCSDEKTLTAAAGHVVKGAN--VCAVVHSWDCGVEARRLLVGARETVLPDEGRAARQPCAEVICTAEVGEDLFQFVRWQLLSGATTEQVQQGLDDLFGAFYETEREK 680
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12962.2432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3C7_9PHAE3.670e-8294.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF10_ECTSI3.270e-7591.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12962contigEcto-sp13_S_contig12962:524..1470 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12962.2432.1mRNA_Ecto-sp13_S_contig12962.2432.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12962 522..1594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12962.2432.1 ID=prot_Ecto-sp13_S_contig12962.2432.1|Name=mRNA_Ecto-sp13_S_contig12962.2432.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=136bp
MLKVGWTVEQQTSERLRNEAGVPVLVHSCSDEKTLTAAAGHVVKGANGNV
CAVVHSWDCGVEARRLLVEARETAPPDEGRAARQPSVEVICTAEVGEDLF
QFVRWQLLSGATTEQVQQGLDDLFGAFYETEQEKP*
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