mRNA_Ecto-sp13_S_contig12954.2426.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12954.2426.1 vs. uniprot
Match: D7FIR2_ECTSI (TPH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR2_ECTSI) HSP 1 Score: 449 bits (1154), Expect = 5.410e-155 Identity = 254/267 (95.13%), Postives = 262/267 (98.13%), Query Frame = 1
Query: 1 QAELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKKQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVVETRKEQIAEKAERQTDAQTLAAAYHQEVIRKVAQGEAAEKATADARAAKARTTARDQQQQLREFQTSYIASLVKVKEDGDETQRAAKAAIEAEEEEKRALKLKNRAEMEKMLAANQDLHQRRAERISEEMAHMEKCRQQRDVLDRAARARKSLEAKRF 801
QAELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKK+QEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEV+ETRKEQIAEKAER TDAQ LAAAYHQEVIRKVA+G+AAEKATADARAAKARTTARDQQQQLREFQTSYIASLVK KEDGDETQRAAKAAIEAEE+EKRALKLKNRAEMEKML AN+DLHQRRAERISEE+A+MEKCRQQRDVLDRAARARKSLE KRF
Sbjct: 12 QAELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKQQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVIETRKEQIAEKAERHTDAQALAAAYHQEVIRKVAEGDAAEKATADARAAKARTTARDQQQQLREFQTSYIASLVKAKEDGDETQRAAKAAIEAEEDEKRALKLKNRAEMEKMLTANKDLHQRRAERISEELAYMEKCRQQRDVLDRAARARKSLETKRF 278
BLAST of mRNA_Ecto-sp13_S_contig12954.2426.1 vs. uniprot
Match: A0A6H5KEN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN4_9PHAE) HSP 1 Score: 394 bits (1013), Expect = 3.050e-133 Identity = 230/267 (86.14%), Postives = 240/267 (89.89%), Query Frame = 1
Query: 1 QAELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKKQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVVETRKEQIAEKAERQTDAQTLAAAYHQEVIRKVAQGEAAEKATADARAAKARTTARDQQQQLREFQTSYIASLVKVKEDGDETQRAAKAAIEAEEEEKRALKLKNRAEMEKMLAANQDLHQRRAERISEEMAHMEKCRQQRDVLDRAARARKSLEAKRF 801
+AELDRIR+KVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKK+QEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEV+ETRKEQIAEKAER TDAQ LAAAYHQEVIRKV +G+AAEKATADARAAKARTTARDQQ+QL EFQ AAIEAEEEEKRALKLKNRAEMEKMLA NQDLHQRRAERISEE+A+MEKCR+QRDVLDRAARARKSLEAKRF
Sbjct: 60 RAELDRIRSKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKQQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVIETRKEQIAEKAERHTDAQALAAAYHQEVIRKVTEGDAAEKATADARAAKARTTARDQQRQLHEFQ----------------------AAIEAEEEEKRALKLKNRAEMEKMLAVNQDLHQRRAERISEELAYMEKCRKQRDVLDRAARARKSLEAKRF 304
BLAST of mRNA_Ecto-sp13_S_contig12954.2426.1 vs. uniprot
Match: A0A7S3XWQ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWQ0_HETAK) HSP 1 Score: 157 bits (397), Expect = 1.950e-41 Identity = 108/267 (40.45%), Postives = 159/267 (59.55%), Query Frame = 1
Query: 1 QAELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKKQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVVETRKEQIAEKAERQTDAQTLAAAYHQEVIRKVAQGEAAEKATADARAAKARTTARDQQQQLREFQTSYIASLVKVKEDGDETQRAAKAAIEAEEEEKRALKLKNRAEMEKMLAANQDLHQRRAERISEEMAHMEKCRQQRDVLDRAARARKSLEAKRF 801
+++L R++ KV TP +D +ARRRHLK LSD RVS WPNTLEA R+ KENWK ++E+ +E +R+++D+ EA LQ++MR TI+ AN LYEQT +MKLL+S L AEVV+ R+ Q EK +R+ L +H E++R++ E E + AKAR DQQ+QL E++ YI L++ K +G+ + A+A R E+ML +N DL RR +++ E + ++R ARK+LE +RF
Sbjct: 8 RSDLQRLKEKVKATPMSDHEARRRHLKALSDNRVSRWPNTLEANRKQKENWKIEKEERIEKERQEIDRREAELQKEMRLLTIQNANKVLYEQTDRMKLLKSRKLLAEVVQEREVQKLEKLQRRKGDVDLELQHHDEMVRQLRLAEDREAQALAKKKAKARAVQADQQEQLEEYKAKYIEGLLEEKAEGERVRARAEADFLEXXXXXXXXXXXARRVAEEMLRSNADLQARREAQLAAEKREQDDREAHLVEVERMKGARKALEVRRF 274
BLAST of mRNA_Ecto-sp13_S_contig12954.2426.1 vs. uniprot
Match: A0A835YVV5_9STRA (TPH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVV5_9STRA) HSP 1 Score: 155 bits (393), Expect = 7.410e-41 Identity = 111/267 (41.57%), Postives = 148/267 (55.43%), Query Frame = 1
Query: 1 QAELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKKQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVVETRKEQIAEKAERQTDAQTLAAAYHQEVIRKVAQGEAAEKATADARAAKARTTARDQQQQLREFQTSYIASLVKVKEDGDETQRAAKAAIEAEEEEKRALKLKNRAEMEKMLAANQDLHQRRAERISEEMAHMEKCRQQRDVLDRAARARKSLEAKRF 801
+AE+ IRAKV PETD +ARRR LK LSDERV HWPNTLEA R K+NWK ++E +E +R +D+ EA LQRQMR ETI +AN LYEQT K+K LRS LLY +++ETR Q+ E R+ + AAY ++ +R E Q +QL E + Y+ASLV + +G A RAEMEKM+A N L ++R +E +++C ++R L+ A ARK+LE RF
Sbjct: 4 RAEVATIRAKVAPPPETDLEARRRELKKLSDERVKHWPNTLEATRMKKQNWKLEKEQRLEEERLQIDRREAELQRQMRLETIAKANAALYEQTDKIKSLRSALLYGDILETRAAQVQEAQARRARSSVRDAAYLEQALRGARAVEERXXXXXXXXXXXXXXXXAVQMEQLSECRDKYVASLVAERAEGARVAAEAAXXXXXXXXXXXXXXXXARAEMEKMMAVNTSLREQREAHAQKEQEELQRCEEERGALNALAAARKALEGLRF 270
BLAST of mRNA_Ecto-sp13_S_contig12954.2426.1 vs. uniprot
Match: A0A5D6Y2N9_9STRA (TPH domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2N9_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.640e-33 Identity = 95/236 (40.25%), Postives = 141/236 (59.75%), Query Frame = 1
Query: 7 ELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKKQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVVETRKEQIAEKAERQTDAQTLAAAYHQEVIRKVAQGEAAEKATADARAAKARTTARDQQQQLREFQTSYIASLVKVKEDGDETQRAAKAAIEAEEEEKRALKLKNRAEMEKMLAANQDLHQRRAERISEE 714
EL+RI A V+ ++D +A+R +K S++R + WPNTLEA R+ K+ WKK +E+ E R+ +D+EEA LQR+ R + I+RAN LYEQT +MK LRS L A+VV R Q+ EK + + Y ++V+ KV QGE EKA + + AR Q+QQL E++ YI+ L + K DG+ T+ A+ + E+E +RA KL+ R E+ AN L R ++ +E
Sbjct: 10 ELERILASVSAPTQSDREAKRLAIKAKSEQRTAQWPNTLEAMRKKKDRWKKDKEEREEEARKKIDEEEAQLQREARTKQIERANHLLYEQTDRMKTLRSKQLLADVVHHRTLQVEEKTMLDEQDRLVDFVYDRQVLAKVLQGEEEEKAERKRKQLEHEKLARVQKQQLEEYKERYISELREEKRDGERTKEKAEQDLRDEQERERARKLRLRQAGEETQLANMRLKAHREVQLEQE 245
BLAST of mRNA_Ecto-sp13_S_contig12954.2426.1 vs. uniprot
Match: W4GU32_9STRA (TPH domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GU32_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.420e-27 Identity = 92/242 (38.02%), Postives = 144/242 (59.50%), Query Frame = 1
Query: 1 QAELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKKQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVVETRKEQIAEKAERQTDAQTLAAAYHQEVIRKVAQGEAAEKATADARAAKARTTARDQQQQLREFQTSYIASLVKVKEDGDETQRAAKAAIEAEEEEKRALKLKNRAEM--EKMLAANQDLHQRRAERISEEMA 720
++ELDRIR ++ +++ +A+R+HLK LS +R WPNTLEA R+ KENWKK +E+ EA+R +D+EE LQ++ R + I+RAN LYEQT +MK LRS L A+V++ R+ QI EK E + Q + + ++ ++ + R K + QQ+QL E++ S+IA+L + DG+ + AKA +A +EE+ L K R + E M AN+ L+ R + +E+A
Sbjct: 7 ESELDRIRQSISDPVQSNHEAKRQHLKELSTQRTGKWPNTLEAMRRKKENWKKDKEEREEAERLKIDEEELRLQKEYRTKQIERANRLLYEQTDRMKTLRSKELLADVLQDREYQIGEKNEFKAMDQKVEDGWTGVLMTQLRDADKKADDERKVRERKHKELVVMQQKQLEEYKNSHIATLREEMRDGERIK--AKAEQDARDEEESELARKRRVKQANEDMRLANERLNLLRKQEAEKEVA 246
BLAST of mRNA_Ecto-sp13_S_contig12954.2426.1 vs. uniprot
Match: A0A833S2A7_PHYIN (Trichohyalin-plectin-homology domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S2A7_PHYIN) HSP 1 Score: 116 bits (291), Expect = 2.630e-26 Identity = 86/225 (38.22%), Postives = 132/225 (58.67%), Query Frame = 1
Query: 7 ELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKKQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVVETRKEQIAEKAERQTDAQTLAAAYHQEVIRKVAQGEAAEKATADARAAKARTTARDQQQQLREFQTSYIASLVKVKEDGDETQRAAKAAIEAEEEEKRALKLKNRAEMEKMLAANQDL 681
EL+R+RA V+ ++D +ARR+ +K+ S++R + WPNTLEA R K+ WKK +E+ +E R+ +D+EE LQR+ + + I+RAN LYEQT +MK LRS L A+VV R Q +K + Y Q+V+ +V +GEA E+ R + A Q+QQL E++ YI L + K +G+ ++ A+ E+E+ R KL+ + E ANQ L
Sbjct: 11 ELERMRASVSPPVQSDREARRQAIKLKSEQRTAKWPNTLEALRMKKDRWKKDKEERLEXXRQKIDEEEMRLQREAQTKKIERANRLLYEQTDRMKTLRSKQLLADVVHHRTLQFEDKRMLKDQDDLTNYYYDQQVVAQVIEGEAEEQRQRKKRLVENARLAAIQKQQLEEYKQRYINELREEKREGELMKQQAEQEYLDEKEKDRQRKLRLKQASEDTQLANQRL 235
BLAST of mRNA_Ecto-sp13_S_contig12954.2426.1 vs. uniprot
Match: A0A397DPQ0_9STRA (TPH domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DPQ0_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.060e-26 Identity = 96/245 (39.18%), Postives = 146/245 (59.59%), Query Frame = 1
Query: 1 QAELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKKQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVVETRKEQIAEKAERQTDAQTLAAAYHQEVIRKVAQGEAAEKATADARAAKARTTAR---DQQQQLREFQTSYIASLVKVKEDGDETQRAAKAAIEAEEEEKRALKLKNRAEM--EKMLAANQDLHQRRAERISEEMA 720
++ELDRIR ++ +++ +A+R+HLK LS +R WPNTLEA R+ KENWKK +E+ EA+R +D+EE LQ++ R + I+RAN LYEQT +MK LRS L A+V++ R+ QI EK + Q + + ++ AQ A+K D R + R QQ+QL E++ S+IA+L + DG+ + AKA +A +EE+ L K R + E M AN+ L+ R + +E+A
Sbjct: 7 ESELDRIRQSISDPVQSNHEAKRQHLKELSTQRTGKWPNTLEAMRRKKENWKKDKEEREEAERLKIDEEELRLQKEYRTKQIERANRLLYEQTDRMKTLRSKELLADVLQDREYQIGEKNAFKAMDQKVEDGWTGVLM---AQLRDADKKADDERKVRERKHKELVVMQQKQLEEYKNSHIATLREEMRDGERIK--AKAEQDARDEEETELARKRRVKQANEDMRLANERLNLLRKQEAEKEVA 246
BLAST of mRNA_Ecto-sp13_S_contig12954.2426.1 vs. uniprot
Match: D0NNB5_PHYIT (TPH domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0NNB5_PHYIT) HSP 1 Score: 115 bits (288), Expect = 6.880e-26 Identity = 85/225 (37.78%), Postives = 133/225 (59.11%), Query Frame = 1
Query: 7 ELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKKQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVVETRKEQIAEKAERQTDAQTLAAAYHQEVIRKVAQGEAAEKATADARAAKARTTARDQQQQLREFQTSYIASLVKVKEDGDETQRAAKAAIEAEEEEKRALKLKNRAEMEKMLAANQDL 681
EL+R+RA V+ ++D +ARR+ +K+ S++R + WPNTLEA R K+ WKK +E+ +E + +D+EE LQR+ + + I+RAN LYEQT +MK LRS L A+VV R Q+ +K + Y Q+V+ +V +GEA E+ R + A Q+QQL E++ YI+ L + K +G+ ++ A+ E+E+ R KL+ + E ANQ L
Sbjct: 11 ELERMRASVSPPAQSDREARRQAIKLKSEQRTAKWPNTLEALRMKKDRWKKDKEERLEEXXQKIDEEEMRLQREAQTKQIERANWLLYEQTDRMKTLRSKQLLADVVHHRTLQLEDKRMLKDQDDLTNYHYDQQVVAQVIEGEAEEQRQRKKRLEENARLAAIQKQQLEEYKQRYISELREEKREGELMKQQAEQEYLDEKEKDRQRKLRLKQASEDTQLANQRL 235
BLAST of mRNA_Ecto-sp13_S_contig12954.2426.1 vs. uniprot
Match: A0A1V9Z7K3_9STRA (TPH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z7K3_9STRA) HSP 1 Score: 113 bits (282), Expect = 4.610e-25 Identity = 96/244 (39.34%), Postives = 139/244 (56.97%), Query Frame = 1
Query: 1 QAELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKKQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVVETRKEQIAEKAERQTDAQTLAAAYHQEVIRKVAQGEAAEKATADARAAKARTTARDQQQQLREFQTSYIASLVKVKEDGDETQRAAKA----AIEAEEEEKRALKLKNRAEMEKMLAANQDLHQRRAERISEEMA 720
+A+L RIR+ V++ T+ +A+R L+ LS R + WPNTLEA R+ KENWKK +E+ E +RR +D EEA LQ++ R I+RAN LYEQT KMK LRS L +V+ R+ QIAEK + Q + + +++A A + A R AK A Q+ QL E++ ++IASL + K DG+ + A+ +EAE + KR K N E AN+ L RA+ + E+A
Sbjct: 7 EADLARIRSNVSEPEVTNREAKRAALRELSQARTNKWPNTLEAMRRKKENWKKDKEEREEDERRKIDLEEARLQKEARTRQIERANRLLYEQTDKMKTLRSKELLNDVLADREFQIAEKHALKAMDQRVEEGWTALERQQLADANAKQAAEDARRHAKFLELAAIQKTQLEEYKNNFIASLREEKTDGERIKAKAEQDLRDELEAEADRKRRTKQAN----EDTRLANERLKALRAQEKAAELA 246 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12954.2426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12954.2426.1 >prot_Ecto-sp13_S_contig12954.2426.1 ID=prot_Ecto-sp13_S_contig12954.2426.1|Name=mRNA_Ecto-sp13_S_contig12954.2426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=267bp QAELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENback to top mRNA from alignment at Ecto-sp13_S_contig12954:3..4209- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12954.2426.1 ID=mRNA_Ecto-sp13_S_contig12954.2426.1|Name=mRNA_Ecto-sp13_S_contig12954.2426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4207bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12954:3..4209- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12954:3..4209- >mRNA_Ecto-sp13_S_contig12954.2426.1 ID=mRNA_Ecto-sp13_S_contig12954.2426.1|Name=mRNA_Ecto-sp13_S_contig12954.2426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=801bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12954:3..4209- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |