mRNA_Ecto-sp13_S_contig12951.2424.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12951.2424.1
Unique NamemRNA_Ecto-sp13_S_contig12951.2424.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12951.2424.1 vs. uniprot
Match: A0A6H5L9M6_9PHAE (S1 motif domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9M6_9PHAE)

HSP 1 Score: 450 bits (1158), Expect = 4.500e-155
Identity = 224/229 (97.82%), Postives = 226/229 (98.69%), Query Frame = 1
Query:   16 RGDYDDEDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQLLKVWTHRMMDAVSAVAGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQVS 702
            RGDYDDEDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAV LARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLH LQDQVPPQQLLKVWTHRMMDAVSAV GVDINHAAEHEHAVG+LQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQV+
Sbjct:  127 RGDYDDEDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVGLARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHPLQDQVPPQQLLKVWTHRMMDAVSAV-GVDINHAAEHEHAVGLLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQVN 354          
BLAST of mRNA_Ecto-sp13_S_contig12951.2424.1 vs. uniprot
Match: D8LQN4_ECTSI (GTB1 RNA binding / hydrolase, acting on ester bonds, also similar to transcription elogantion facto n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN4_ECTSI)

HSP 1 Score: 453 bits (1166), Expect = 3.580e-146
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 1
Query:   16 RGDYDDEDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQLLKVWTHRMMDAVSAVAGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQV 699
            RGDYDD+DEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQLLKVWTHRMMDAVSAV GVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQV
Sbjct: 1084 RGDYDDQDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQLLKVWTHRMMDAVSAV-GVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQV 1310          
BLAST of mRNA_Ecto-sp13_S_contig12951.2424.1 vs. uniprot
Match: A0A7S2A5F9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A5F9_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.210e-51
Identity = 101/225 (44.89%), Postives = 149/225 (66.22%), Query Frame = 1
Query:   22 DYDDEDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQLLKVWTHRMMDAVSAVAGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQ 696
            D ++ED+E+  WK C++  V+D+VA +F RS RG+KEF DF+VN + A+A+AR+ +DPL E    W+    +G FG EM  L +H LQ  +P   LL+ +   + +AV+ V GVD+N A   +H  G+L FVPGLGPRKA  L++ +  + GGVVPSRK LL+ ++L  +V+TN+  FLRIR+  +L  Q    L P DDTR+HP+ Y   +WA +I  +AL+++
Sbjct:   46 DINNEDDEDFQWK-CNVDIVEDNVAQLFGRSIRGKKEFPDFAVNLKCAIAVARHAKDPLGELTYAWSVASDAGVFGAEMLYLNVHPLQRFLPKPLLLRQYERVLCNAVAEV-GVDVNGACTFDHMHGMLTFVPGLGPRKAAALKQGIDRI-GGVVPSRKDLLARRLLGPVVFTNSVAFLRIRDIDRLNNQF---LFPLDDTRLHPDVYTRNNWAVKIAIDALELE 264          
BLAST of mRNA_Ecto-sp13_S_contig12951.2424.1 vs. uniprot
Match: A0A7S4R4E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4E1_9STRA)

HSP 1 Score: 185 bits (469), Expect = 6.430e-50
Identity = 101/225 (44.89%), Postives = 149/225 (66.22%), Query Frame = 1
Query:   22 DYDDEDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQLLKVWTHRMMDAVSAVAGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQ 696
            D ++ED+E+  WK C++  V+D+VA +F RS RG+KEF DF+VN + A+A+AR+ +DPL E    W+    +G FG EM  L +H LQ  +P   LL+ +   + +AV+ V GVD+N A   +H  G+L FVPGLGPRKA  L++ +  + GGVVPSRK LL+ ++L  +V+TN+  FLRIR+  +L  Q    L P DDTR+HP+ Y   +WA +I  +AL+++
Sbjct: 1246 DINNEDDEDFQWK-CNVDIVEDNVAQLFGRSIRGKKEFPDFAVNLKCAIAVARHAKDPLGELTYAWSVASDAGVFGAEMLYLNVHPLQRFLPKPLLLRQYERVLCNAVAEV-GVDVNGACTFDHMHGMLTFVPGLGPRKAAALKQGIDRI-GGVVPSRKDLLARRLLGPVVFTNSVAFLRIRDIDRLNNQF---LFPLDDTRLHPDVYTRNNWAVKIAIDALELE 1464          
BLAST of mRNA_Ecto-sp13_S_contig12951.2424.1 vs. uniprot
Match: B7G582_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G582_PHATC)

HSP 1 Score: 171 bits (434), Expect = 3.140e-45
Identity = 97/230 (42.17%), Postives = 138/230 (60.00%), Query Frame = 1
Query:   25 YDDEDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQLLKVWTHRMMDAVSAVAGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQVSTALD 714
            +DD+DE +  WK C++  + D VA +F RS RG KEF DF+VN + A+A+ARY QDPL E    W+    +G FG EM  L +H +Q  +P  +LL+ +   + D V+A  G DIN A   +H  G+L FV G+GPRKA  L++ L   LG  +  R+ LL ++++  +VY N   FLRIR   +L EQ    L P DDTR+HP+ Y   +WA +I  +AL+ + S   D
Sbjct: 1154 FDDQDEGD--WK-CNVDLIDDSVAQLFGRSVRGRKEFPDFAVNLKCAIAVARYAQDPLGELTYAWSVASDAGAFGTEMLYLNIHPMQQLLPRTRLLREYERILCD-VTAEVGTDINSACTFDHLRGLLVFVAGMGPRKAANLKQTLSQ-LGSALSRRRDLLENRMIGPVVYNNLVAFLRIRRVDQLVEQF---LHPLDDTRLHPDVYLRHNWAIKIAFDALEREDSKTKD 1375          
BLAST of mRNA_Ecto-sp13_S_contig12951.2424.1 vs. uniprot
Match: A0A836C842_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C842_9STRA)

HSP 1 Score: 170 bits (430), Expect = 9.930e-45
Identity = 90/154 (58.44%), Postives = 110/154 (71.43%), Query Frame = 1
Query:  232 SSGNFGHEMFSLRLHALQDQVPPQQLLKVWTHRMMDAVSAVAGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDV 693
            SSG FGHEM SLRLH LQ +V   QLL+    R++DAV+ V GVDIN A E EH  G+LQFV GLGPRKA  LR  +   LGGV+ SR+ LL  ++L    YTNAA FLRIR+RG+L E+ +  ++PFDDTR+H ECY    WA++ICANALDV
Sbjct:  292 SSGEFGHEMLSLRLHPLQGEVTKGQLLRALEQRLIDAVNEV-GVDINMACEKEHMRGMLQFVAGLGPRKAAALRTGISQSLGGVINSRRQLLDRKLLGPSTYTNAASFLRIRKRGRLEERDD--INPFDDTRIHTECYIKHHWARQICANALDV 442          
BLAST of mRNA_Ecto-sp13_S_contig12951.2424.1 vs. uniprot
Match: A0A1E7F5U6_9STRA (S1 motif domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5U6_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.950e-42
Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = 1
Query:   28 DDEDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQ---LLKVWTHRMMDAVSAVAGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALD 690
            DDED+E+  WK C+   + D V+ VF  S RG+KEF D +   R A+++ARY +DPL E A  W     +G FG E+  + +H +Q  +   +   LLK +   + D V+ V G D+N   E+ H  G+L FVPGLGPRKA  L++R+   LG +VP+R++LL ++ +  +VY N+  FLRI    + + Q + QL P D+TR+HP+ Y   +WA +I  +AL+
Sbjct:  690 DDEDDEDFDWK-CNADLIDDSVSQVFGHSPRGKKEFPDHAPALRVAISIARYGKDPLAELAYSWNVASDTGLFGTELLYINIHPMQQLLKRFKGPLLLKHYERALCDVVAEV-GADVNKCCEYNHLQGLLTFVPGLGPRKAAYLKQRVEQ-LGSLVPTRRSLLENRFMGPVVYNNSIAFLRIHHVDEHSSQ-QVQLHPLDNTRLHPDVYQKNNWASKIATDALE 909          
BLAST of mRNA_Ecto-sp13_S_contig12951.2424.1 vs. uniprot
Match: A0A7S3HQM4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQM4_9STRA)

HSP 1 Score: 153 bits (387), Expect = 4.360e-39
Identity = 95/230 (41.30%), Postives = 132/230 (57.39%), Query Frame = 1
Query:   25 YDDEDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVP--PQQLLKVWTHRMMDAVSAVAGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALDVQVSTA 708
            Y DEDEE   ++   +  VKD++A +F  S R +K F +    + AAV LARY Q+PL E+   W    S   FG+E+  L +H L+  +    Q LL     R++DAV  V GVDIN A  ++H   +L FV GLG RKA  LR+ +      +  SR  LL  ++L S V+TNAAGF+RI          +  +DP D+TR+HPECY T D+A +ICA+AL+V  S +
Sbjct:    5 YADEDEEFVPYR-AQVMIVKDELARIFQNSDRRKKMFPELQPAEAAAVCLARYAQEPLAEYCSAWNAASSQETFGYELLFLPVHPLKSLLKGAQQALLNALECRLVDAVCDV-GVDINKACAYDHIAPMLAFVGGLGLRKADALRQNIRKSAKAIT-SRNDLLLRKLLGSCVWTNAAGFVRI---------CDNVMDPLDNTRIHPECYTTHDFATKICADALEVAHSNS 222          
BLAST of mRNA_Ecto-sp13_S_contig12951.2424.1 vs. uniprot
Match: A0A448YUZ9_9STRA (S1 motif domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUZ9_9STRA)

HSP 1 Score: 153 bits (386), Expect = 8.400e-39
Identity = 84/223 (37.67%), Postives = 133/223 (59.64%), Query Frame = 1
Query:   31 DEDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQ---LLKVWTHRMMDAVSAVAGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALD 690
            DED++E++  +C+   + D V+ VF  S RG+KEF D +   R A+++ARY +DPL E A  W     +G FG E+F   ++ +Q  +   +   LL+ +   + D V+ V G D+N   E+ H  G+L FVPGLGPRKA  L++++   LG  VP+R++LL ++ +  +VY N+  FLRI    +     + QL P D+TR+HP+ Y   +WA +I  +AL+
Sbjct: 1172 DEDDDEDLDWKCNADLIDDSVSQVFGHSPRGKKEFPDHAPALRVAISIARYGKDPLAELAYAWNVASDTGLFGTELFYFNINPMQQLLKRFKGPLLLRHYERALCDVVAEV-GADVNKCCEYSHLQGLLTFVPGLGPRKAAFLKQKVEQ-LGSSVPTRRSLLENRFMGPVVYNNSIAFLRIHHFDERTSH-QVQLHPLDNTRLHPDVYQKNNWASKIATDALE 1391          
BLAST of mRNA_Ecto-sp13_S_contig12951.2424.1 vs. uniprot
Match: A0A7S4ELD9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELD9_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.110e-38
Identity = 88/225 (39.11%), Postives = 134/225 (59.56%), Query Frame = 1
Query:   28 DDEDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQ---LLKVWTHRMMDAVSAVAGVDINHAAEHEHAVGVLQFVPGLGPRKAFKLRERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRE-RGKLAEQLEGQLDPFDDTRVHPECYNTQDWAQRICANALD 690
            DD+DEE+  WK C+   + D V+ VF  S RG+KEF D +   R A+++ARY +DPL E A  W     +G FG E+    ++ +Q  +   +   LL+ +   + DAV+AV G D+N   E+ H  G+L FVPGLGPRKA  L++++   LG  V +R++LL ++ +  +VY N+  FLRI       + Q+  QL P D+TR+HP+ Y   +WA +I  +AL+
Sbjct: 1148 DDDDEEDLDWK-CNADLIDDSVSQVFGHSPRGKKEFPDHASALRVAISIARYGKDPLAELAYAWNVASDTGLFGTELLYFNINPMQQLLKRFKGPLLLRHYERALCDAVAAV-GADVNKCCEYSHLQGLLTFVPGLGPRKAAFLKQKVEQ-LGSSVATRRSLLENRYMGPVVYNNSIAFLRIHHFEEHNSHQI--QLHPLDNTRLHPDVYQKNNWASKIATDALE 1367          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12951.2424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L9M6_9PHAE4.500e-15597.82S1 motif domain-containing protein n=1 Tax=Ectocar... [more]
D8LQN4_ECTSI3.580e-14699.12GTB1 RNA binding / hydrolase, acting on ester bond... [more]
A0A7S2A5F9_9STRA2.210e-5144.89Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4R4E1_9STRA6.430e-5044.89Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
B7G582_PHATC3.140e-4542.17Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A836C842_9STRA9.930e-4558.44S1 motif domain-containing protein n=1 Tax=Tribone... [more]
A0A1E7F5U6_9STRA4.950e-4240.18S1 motif domain-containing protein n=1 Tax=Fragila... [more]
A0A7S3HQM4_9STRA4.360e-3941.30Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A448YUZ9_9STRA8.400e-3937.67S1 motif domain-containing protein n=1 Tax=Pseudo-... [more]
A0A7S4ELD9_9STRA2.110e-3839.11Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12951contigEcto-sp13_S_contig12951:1211..3051 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score454.5
Seed ortholog evalue3e-125
Seed eggNOG ortholog2880.D8LQN4
Model size714
KEGG koko:K11292
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.obsolete transcription factor activity, core RNA polymerase II binding
EggNOG OGsCOG2183@1,KOG1856@2759
Cds size714
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462692.810777-CDS-Ecto-sp13_S_contig12951:1210..13461681462692.810777-CDS-Ecto-sp13_S_contig12951:1210..1346Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12951 1211..1346 -
1681462692.8223057-CDS-Ecto-sp13_S_contig12951:1676..18991681462692.8223057-CDS-Ecto-sp13_S_contig12951:1676..1899Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12951 1677..1899 -
1681462692.8317113-CDS-Ecto-sp13_S_contig12951:2228..23721681462692.8317113-CDS-Ecto-sp13_S_contig12951:2228..2372Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12951 2229..2372 -
1681462692.8412316-CDS-Ecto-sp13_S_contig12951:2840..30511681462692.8412316-CDS-Ecto-sp13_S_contig12951:2840..3051Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12951 2841..3051 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12951.2424.1prot_Ecto-sp13_S_contig12951.2424.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12951 1211..3051 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12951.2424.1

>prot_Ecto-sp13_S_contig12951.2424.1 ID=prot_Ecto-sp13_S_contig12951.2424.1|Name=mRNA_Ecto-sp13_S_contig12951.2424.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=238bp
MVRWHRGDYDDEDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSV
NQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPP
QQLLKVWTHRMMDAVSAVAGVDINHAAEHEHAVGVLQFVPGLGPRKAFKL
RERLGTVLGGVVPSRKALLSSQVLKSLVYTNAAGFLRIRERGKLAEQLEG
QLDPFDDTRVHPECYNTQDWAQRICANALDVQVSTALD
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mRNA from alignment at Ecto-sp13_S_contig12951:1211..3051-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12951.2424.1 ID=mRNA_Ecto-sp13_S_contig12951.2424.1|Name=mRNA_Ecto-sp13_S_contig12951.2424.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1841bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12951:1211..3051- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTCCGATGGCATAGGGGCGATTATGACGACGAGGATGAGGAGGAAGA AGTCTGGAAGCAGTGCTCGCTAGCCCCCGTGAAGGACGACGTGGCTTGCG TCTTCGCGAGATCGACCAGGGGAGAGAAAGAGTTCGCCGACTTCTCTGTG AACCAGAGGGCCGCCGTGGCGCTGGCGAGGTATCTGCAGGACCCCCTCGT CGAGTTCGCAGGTAACGCTACGCTCTTGTCGTTGTTGTTGTTGTTGTTGC TGTTGGTAGTGGTGGTGGTGGGAGTGTTGTTGATGTTGCTGCCTATTGTT GTATCACCATCGTTGTCGATGTGCTTGATCCTTTTTGGCTTGTGTACTAA CAAGGTGGACGATAATAATTGAAACTGTCCAGTTAAGTGCTCTTCATTCT TGCGGGCTTGATTTCCGTTGCGGTCGTCTCTGACTTGCGGACGGATTCAA TGTCAGTATGCTTAACATCGTAGACAGTTGAACACTGAAGGCACCTCCGG AGAAGTCATGCAGCCATAGCCCATCTTGTTTTTAACGTAATCTCCTCGTG TTTCGGCGTCGTTGACATCACCCCCTCTTTTCCACCGGCATCGTTGATGC CCGACCTTCCGATGCTGCTACTGTAGCCGGCTGAAACCGATTTTTTCTTG CCTTGATGGCAACACGCAAACCTTTTCAGGCATGTGGACCACCATGGACA GCTCGGGAAACTTCGGGCACGAGATGTTCTCTCTCAGACTTCACGCCCTG CAGGACCAGGTACCTCCGCAGCAGCTGCTCAAGGTCTGGACGCACCGCAT GATGGACGCTGTCAGCGCTGTCGGTGAGGCTGTTTTTTTTTATTTTCTGT TTGGTTGCACGGCCCACTTGATGACCGAGCGGGGCGATGCCTCCTCTCGT CGTGTAGCTTTTGCTTTGTCGAACCCTACGGTAACAAAACAACCTCTCTT TCCTCTTGCAGAGGGGGTGGCCATCTCTTGCCTGTATTTGTGCTTGTTCT TGTACTGTACTTGTACTGGTGCACGGGTGACTACTGTTTCTCGCCTTTAC GCTGAGGAAAGTAGTTTTGCCTATGTGCTTGTAGCTGCAACCCATGGCTT CTGTTGAGCGATCGCTTGTCCCGATAGTCGACCAATCAATGTTCAACGCG AGCAGGCGTCGACATTAACCACGCGGCGGAACACGAGCACGCCGTGGGGG TCCTGCAGTTCGTACCAGGGCTGGGCCCCCGCAAGGCCTTCAAGCTCAGG GAGAGGCTGGGTACGGTGCTGGGGGGTGTGGTGCCTTCCAGAAAGGCGCT GCTCAGCTCGCAGGTGCTCAAGTCGCTCGTATACACGAACGCAGCCGGGT TCCTGCGCATCCGCGAGCGGGGGAAGTGAGTGATGTTTTCTTTTCTTTTC TTTTTCCTACCGATAGGAAGGAACTTTTATTTCTCGCGTTCTTTTCTCTC ATTCTGGTTAGAATTTCCCCCGAAAACAGGAAACGCACAAGACACAAACT GACAGGAGGATGGTGTAGACTATTGGTTTTCTGTTTTGTGGTACAATGAG CAGTACGCGAGACCAACAAAAGCATGTTTTTTTGCGCGAGACCGCCTCTC GCTACAGACGCCGCTGTCCCCAAAGCTTAGTCTCGACCCTGGCTCTCTCT CTATATAGTGCTACGGCTAACGCTAACGCTGCCTAATTCCATGTCACCAC GTCAGGCTTGCGGAACAACTTGAGGGACAGTTGGACCCTTTCGATGACAC GAGGGTGCACCCTGAGTGCTACAACACGCAGGACTGGGCGCAAAGAATCT GCGCCAACGCTCTCGATGTGCAGGTAAGTACGGCTCTAGAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12951:1211..3051-

>mRNA_Ecto-sp13_S_contig12951.2424.1 ID=mRNA_Ecto-sp13_S_contig12951.2424.1|Name=mRNA_Ecto-sp13_S_contig12951.2424.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=714bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12951:1211..3051- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTCCGATGGCATAGGGGCGATTATGACGACGAGGATGAGGAGGAAGA
AGTCTGGAAGCAGTGCTCGCTAGCCCCCGTGAAGGACGACGTGGCTTGCG
TCTTCGCGAGATCGACCAGGGGAGAGAAAGAGTTCGCCGACTTCTCTGTG
AACCAGAGGGCCGCCGTGGCGCTGGCGAGGTATCTGCAGGACCCCCTCGT
CGAGTTCGCAGGCATGTGGACCACCATGGACAGCTCGGGAAACTTCGGGC
ACGAGATGTTCTCTCTCAGACTTCACGCCCTGCAGGACCAGGTACCTCCG
CAGCAGCTGCTCAAGGTCTGGACGCACCGCATGATGGACGCTGTCAGCGC
TGTCGCAGGCGTCGACATTAACCACGCGGCGGAACACGAGCACGCCGTGG
GGGTCCTGCAGTTCGTACCAGGGCTGGGCCCCCGCAAGGCCTTCAAGCTC
AGGGAGAGGCTGGGTACGGTGCTGGGGGGTGTGGTGCCTTCCAGAAAGGC
GCTGCTCAGCTCGCAGGTGCTCAAGTCGCTCGTATACACGAACGCAGCCG
GGTTCCTGCGCATCCGCGAGCGGGGGAAGCTTGCGGAACAACTTGAGGGA
CAGTTGGACCCTTTCGATGACACGAGGGTGCACCCTGAGTGCTACAACAC
GCAGGACTGGGCGCAAAGAATCTGCGCCAACGCTCTCGATGTGCAGGTAA
GTACGGCTCTAGAT
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