mRNA_Ecto-sp13_S_contig12944.2418.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12944.2418.1 vs. uniprot
Match: D7FJH9_ECTSI (TPH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJH9_ECTSI) HSP 1 Score: 350 bits (899), Expect = 2.870e-116 Identity = 217/237 (91.56%), Postives = 219/237 (92.41%), Query Frame = 1
Query: 1 MALVASDTRSEASGGSGSARSGGSRKYRVVSRGSNVDESLFGSSNSKGRKKSTGRKILVGEVPPKATVITEEELAQMRRRAIITSLADEEAARVGRENMLEERQRAAXXXXXXXXXXEVEAKKKALKSDIEVERMAHDHMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE 711
MALVASD RSE+SGGSGSARSGGSRKYRVVSRGSNVDESLFGSSNSKGRKKSTGRKIL GEVPPKATVITEEELAQM+RRAIITSLADEEAARVGRENMLEERQRA XXXXXXXXXX LKSDIEVERMAHD MVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQ LAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE
Sbjct: 1 MALVASDARSESSGGSGSARSGGSRKYRVVSRGSNVDESLFGSSNSKGRKKSTGRKILEGEVPPKATVITEEELAQMKRRAIITSLADEEAARVGRENMLEERQRAXXXXXXXXXXXXXXXXXXXLKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQ------LAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE 231
BLAST of mRNA_Ecto-sp13_S_contig12944.2418.1 vs. uniprot
Match: A0A835YY84_9STRA (Tumor suppressor, Mitostatin-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY84_9STRA) HSP 1 Score: 169 bits (428), Expect = 4.750e-46 Identity = 127/238 (53.36%), Postives = 156/238 (65.55%), Query Frame = 1
Query: 10 VASDTRSEASGGSGSARSGGSRKYRVVSRGSNVDESLFGSSNSKGRK----KSTGRKILVGEVPPKATVITEEELAQMRRRAIITSLADEEAARVGRENMLEERQRAAXXXXXXXXXXEVEAKKKALKSDIEVERMAHDHMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE 711
+ SDTRSEAS GSG+ R+YRVVSRGS VDE+LFG + SKG K K T + V + P T+++ +EL +R AII S ++E+A R XXXXXX EAK KA +SD+E+E +A + +V+KMA EKLD NNDLVKMLNSLG+RAAAFTIRD+Q LA++ +E +EK YD RMD +MELDRLK L RD EQAK KR EDRKVI EQIE
Sbjct: 1 MVSDTRSEASRGSGT------RRYRVVSRGSEVDEALFGGA-SKGSKGSPAKHTTQAQKVAKPAPNTTMLSTKELHSIREHAIIKSNSEEQAERXXXXXXXXXXXXXXXXXXXXMIQMADEAKAKAKRSDLELETIAREQLVRKMANEKLDENNDLVKMLNSLGSRAAAFTIRDQQ------LADRASKESTEKEYDTRMDKVMELDRLKSLQARDEVEQAKLRKRHEDRKVIMEQIE 225
BLAST of mRNA_Ecto-sp13_S_contig12944.2418.1 vs. uniprot
Match: A0A7S3UXE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXE1_HETAK) HSP 1 Score: 133 bits (334), Expect = 1.870e-32 Identity = 112/254 (44.09%), Postives = 151/254 (59.45%), Query Frame = 1
Query: 16 SDTRSEASGGSGSARSGGSRKYRVVSRGSNVDESLFGSSNSKGRKKST-----------------------GRKILVGEVPPKATVITEEELAQMRRRAIITSLADEEAARVGRENMLEERQRAAXXXXXXXXXXEVEAKKKALKSDIEVERMAHDHMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQI 708
SDT S+A SARSGG R+YR VS SNVDESLFG G ++++ R + +VP A+++T +L +M+ A++ + D R E E ++ XXXXXXXXXX KSD+EVE++A D +++MA K+ DLVK+LN+LGARAAAFTIRD+Q L K R+E SE Y+ RM+M+MEL+RLKDL +++AEE AK +KRVEDR+VI EQI
Sbjct: 2 SDTYSKAP----SARSGG-RRYRKVSGNSNVDESLFGGGGGSGSRQTSRPGSNGSYRSQRSARGMAMQNNGSRIVEASKVPANASIVTRSDLMRMKAGAVLKTEQDLINEREAAEAEREIKEXXXXXXXXXXXXXXXXXXXXXXKSDLEVEKIARDQQIRQMAEAKMTEETDLVKLLNTLGARAAAFTIRDQQ------LENKKRQEESELEYERRMEMLMELNRLKDLQRQEAEEAAKAAKRVEDRRVIEEQI 244
BLAST of mRNA_Ecto-sp13_S_contig12944.2418.1 vs. uniprot
Match: A0A7S3M6Y1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6Y1_9STRA) HSP 1 Score: 128 bits (321), Expect = 9.810e-31 Identity = 94/210 (44.76%), Postives = 135/210 (64.29%), Query Frame = 1
Query: 79 YRVVSRGSNVDESLFGSSNSKGRKKSTGRKILVGEVPPKATVITEEELAQMRRRAIITSLADEEAARVGRENMLEERQRAAXXXXXXXXXXEVEAKKKALKSDIEVERMAHDHMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQI 708
YR V+ S VDESLFG + + + GR+ + G + P + VI+ +EL ++R ++I + A+ A + E + XXXXXXXXXX A KSD+E+ +A + ++ MA +KLD N D+VK+LNS+ RA AFTIRD+Q L EK+R EK YDER+D+++E+DR++D+ KR+ EEQ +K+KRVEDRKVI EQI
Sbjct: 18 YRSVAHTSQVDESLFGKDSGRNGTMTKGRRTVTGPLAPSSIVISADELNRIRNGSVIKTEAEIAADKEHAERLKXXXXXXXXXXXXXXXXXXXXXXXLAKKSDVEIAEIARNKAIRNMAEKKLDENADVVKLLNSMAQRATAFTIRDQQ------LEEKERLAKLEKEYDERLDVMIEIDRVQDIMKRENEEQYRKTKRVEDRKVINEQI 221
BLAST of mRNA_Ecto-sp13_S_contig12944.2418.1 vs. uniprot
Match: A0A7S2V109_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V109_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.910e-28 Identity = 93/199 (46.73%), Postives = 130/199 (65.33%), Query Frame = 1
Query: 124 GSSNS-KGRK-KSTGRKILVGEVPPK--ATVITEEELAQMRRRAIITSLADEEAARVGRENMLEERQRAAXXXXXXXXXXEVEAKKKALKSDIEVERMAHDHMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQI 708
GSS S KGR ++TG I+ G+ + A VI+ +L M+ R +I + AD A + +E XXXXXXXXXX KA KSDIE+ +MA D V+K+A EK++ +D+VK+LN+LGARAAAFTIRD+Q +E L E+ E+ Y++RMDM+ME+DRLKD+ R+ EE+ K++KR EDR VI +Q+
Sbjct: 5 GSSGSQKGRSLRNTGSNIVKGKSSSQTGAVVISRRDLQAMKARTVIKTEADMRAEHLAKEEERXXXXXXXXXXXXXXXXXXXXXXXKAKKSDIEIAQMARDQTVRKLAEEKMNEESDMVKLLNTLGARAAAFTIRDEQLSEKARLKER------EQEYEQRMDMLMEIDRLKDIKMREDEERMKQAKRAEDRGVIMQQM 197
BLAST of mRNA_Ecto-sp13_S_contig12944.2418.1 vs. uniprot
Match: A0A7S1XVL0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVL0_9STRA) HSP 1 Score: 120 bits (301), Expect = 7.880e-28 Identity = 97/214 (45.33%), Postives = 132/214 (61.68%), Query Frame = 1
Query: 70 SRKYRVVSRGSNVDESLFGSSNSKGRKKSTGRKILVGEVPPKATVITEEELAQMRRRAIITS-LADEEAARVGRENMLEERQRAAXXXXXXXXXXEVEAKKKALKSDIEVERMAHDHMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQI 708
S YR V++G VDE+LFGS+ GR R++ +V + VI+ +L +R+R + A AA + EER+ XXXXXXXXX EVEAK +SD+E+E A +++ A EK+D NNDLVKML+SLG RA FT+RD+Q E K RE + YD +MD++ME DR+ D+ +R+A E +K +KRVEDRKVI EQI
Sbjct: 53 SSTYRTVAKGPEVDETLFGST---GR-----RRVRRQDVDTTSIVISASDLRDIRKRVTVDDDNAGRSAAMIAAR---EEREXXXXXXXXXXXXLEVEAKSXXRRSDLEIEEEARQEAIREWAREKIDMNNDLVKMLSSLGKRAEIFTVRDRQCRE------KLEREAKAREYDVQMDLMMEADRVADIQRREAIEASKTAKRVEDRKVIEEQI 249
BLAST of mRNA_Ecto-sp13_S_contig12944.2418.1 vs. uniprot
Match: A0A8J2SPE8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPE8_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.200e-25 Identity = 81/201 (40.30%), Postives = 120/201 (59.70%), Query Frame = 1
Query: 106 VDESLFGSSNSKGRKKSTGRKILVGEVPPKATVITEEELAQMRRRAIITSLADEEAARVGRENMLEERQRAAXXXXXXXXXXEVEAKKKALKSDIEVERMAHDHMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQI 708
VDESLFG + K+ GR G +P +A VI+ EL +++ I + A+ + + E + + +AA +K KA KS +E+E+ A +++MA + LD N DLVK L +GARAAAFTIRD+Q L E+ +E +K Y++RMD++ME+DRL+DL +R+ + ++ KRVEDRKVITEQI
Sbjct: 3 VDESLFGR-----KTKTKGRG---GALPARAAVISAAELRRIQGSTRIITAAEIQKDKDELEAIHAVKHKAARARKDRMRALAAASKNKAKKSTMELEKEARKETIRQMADKTLDENLDLVKYLRGIGARAAAFTIRDQQ------LNERGAKEARQKAYEDRMDLLMEVDRLRDLKQREDADNLRRKKRVEDRKVITEQI 189
BLAST of mRNA_Ecto-sp13_S_contig12944.2418.1 vs. uniprot
Match: A0A6H5LHZ8_9PHAE (TPH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHZ8_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.600e-21 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1
Query: 544 LAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE 711
LAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE
Sbjct: 5 LAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE 60
BLAST of mRNA_Ecto-sp13_S_contig12944.2418.1 vs. uniprot
Match: D0NQZ6_PHYIT (TPH domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=D0NQZ6_PHYIT) HSP 1 Score: 94.4 bits (233), Expect = 1.430e-18 Identity = 81/236 (34.32%), Postives = 121/236 (51.27%), Query Frame = 1
Query: 64 GGSRKYRVVSRGSNVDESLFGSSN--SKGRKKS----TGRKILVGEVPPKAT--------------VITEEELAQMRRRAIITSLADEEAARVGRENMLEERQRAAXXXXXXXXXXEVEAKKKALKSDIEVERMAHDHMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE 711
GGSR+YR V+ VD++LFG N +K RKK GR I+ + + V+ E+EL +++ I + AD EA RE E ++ A+ EA +A KS+IE A + + A + D +D VK++ +LG RA AFTIRD+Q L K E VYDE+M+ +ME++RL+ L +++ ++ KK KR DRKV+ +QIE
Sbjct: 21 GGSRRYRRVAHTHQVDDTLFGEKNQLAKNRKKDRTLQAGRDIVGAQSSASSNQETSGRMVTKTPIVVVPEDELERIKAETKILTAADLEALEAKREADQEHQRLASKARKEHMLKLSEEAALRAPKSEIEQIFSAEKQEILRRARVQKDQMHDSVKLMKTLGTRAQAFTIRDQQ------LKVKSELEDEHHVYDEKMNTLMEIERLESLKRQEHRDEVKKQKRYADRKVLEDQIE 250
BLAST of mRNA_Ecto-sp13_S_contig12944.2418.1 vs. uniprot
Match: A0A6G0W7K0_9STRA (TPH domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W7K0_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.920e-18 Identity = 84/243 (34.57%), Postives = 129/243 (53.09%), Query Frame = 1
Query: 52 SARSGGSRKYRVVSRGSNVDESLFGSSNSKG-------RKKSTGRKILVG------EVP-PKA----------TVITEEELAQMRRRAIITSLADEEAARVGRENMLEERQRAAXXXXXXXXXXEVEAKKKALKSDIEVERMAHDHMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQI 708
S RS SRKYR ++ + D++LFGS ++G R + GR I+ G E P PKA TV+ +E A++R I + D E +E+ E + A EA K+A KS+IE+ A ++K A D +D VK++ +LGARAAAFTIRD+Q + K + E E + +E+++++ME+DRL+ L +++A + K+ KR+ DRKV+ EQI
Sbjct: 85 SQRSNPSRKYRRLAAKESCDDTLFGSKRTQGSRDGGGNRSRQAGRDIVNGSSNQEAEAPKPKAQTKVRPTEVSTVLPTDEHARIRNETRILTDTDIEEIAAKKESDAENLRMHAKARKQHMMERAAEAAKRAPKSEIELIVEAEKEEIRKRAAILKDQAHDSVKLMKTLGARAAAFTIRDQQ------INRKKQLEAEEDIQNEKINVMMEIDRLEGLMRQEAVAEEKRLKRLHDRKVLEEQI 321 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12944.2418.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12944.2418.1 >prot_Ecto-sp13_S_contig12944.2418.1 ID=prot_Ecto-sp13_S_contig12944.2418.1|Name=mRNA_Ecto-sp13_S_contig12944.2418.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=237bp MALVASDTRSEASGGSGSARSGGSRKYRVVSRGSNVDESLFGSSNSKGRKback to top mRNA from alignment at Ecto-sp13_S_contig12944:2..4069- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12944.2418.1 ID=mRNA_Ecto-sp13_S_contig12944.2418.1|Name=mRNA_Ecto-sp13_S_contig12944.2418.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4068bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12944:2..4069- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12944:2..4069- >mRNA_Ecto-sp13_S_contig12944.2418.1 ID=mRNA_Ecto-sp13_S_contig12944.2418.1|Name=mRNA_Ecto-sp13_S_contig12944.2418.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=711bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12944:2..4069- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |