prot_Ecto-sp13_S_contig12943.2417.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12943.2417.1
Unique Nameprot_Ecto-sp13_S_contig12943.2417.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length460
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12943.2417.1 vs. uniprot
Match: D7FH38_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH38_ECTSI)

HSP 1 Score: 509 bits (1312), Expect = 2.050e-170
Identity = 357/463 (77.11%), Postives = 375/463 (80.99%), Query Frame = 0 
Query:    1 NRRKSTPFIRRPPPAYGPESVGGMVVFDSAGSGSATXXXXXXXXXXGSRQLHRSPTHPQEAPGGSRGKDSRRGAAPTNGHRDTNGGGIPRERSATRRVDQQQXXXXXXXXXLQRKPRERVREFAEGQYAGKEGDLEGDNTAVGVVIDAAXXXXXXXXXXXXX-SGYKPTPDQYHNQPQSSREKRVSTDVLVGGVAAERPAGRSPTAGGVGIGGGTRGAERSPPPTGKAGSQGGRGVSFSLSPPAGGRVGSNPPQAVRKGGSQSXXXXXXXXXXXXXGDRRAAA--EKHEDXXXXXXXXXXXXXXXXXXXXXRRNEDAAVGQESAEVPRILRRPAGASAXXXXXXXXDRATMDGARDARNASAASTGSGRIGGAG-RPTVASDGRRSSAGRASGGAGAFNSNEAGEDGRSSGSTAFTERPGGGGGFSMGAAEGIVASRIAAYDPFSYSQKDAQSSAGTPRHADM 459
            N+R   P+      AYGP+SVGG+VVFDSAGSGSATXXXXXXXXXXGSRQLHRSPTHPQEAP GS GK SRRGAAPTNGHRD NGGGIPRERSATRR DQQ  XXXXXXXX          EFAEGQYAGKEGDLEGD T  GVV  AA  XXXXXXXXXXX SGYKPTPDQY +QP+ SR+KRVSTDV+VGGVAA RPAGRSP AGGVG+ G TRGAERSPPPTGKAGSQG RGVSFSLSPPAGGR GSNPPQ  RK     XXXXXXXXXXXX  DRRAAA  EKHED                     RRN++AAVGQESAE+PRILRRPAGA+A        DR T+DGARDAR ASAASTGSGRIGGAG RP++A+DGRRSSAGRASGGAG FNS+EAGEDGRSSGSTAF ERPGGGGGFSMGAAEGIVASRIAAYDPFSYSQKDAQSS GTPRHADM
Sbjct:  408 NQRPPPPYNDXXXXAYGPDSVGGIVVFDSAGSGSATXXXXXXXXXXGSRQLHRSPTHPQEAPAGSGGKGSRRGAAPTNGHRDANGGGIPRERSATRRGDQQHQXXXXXXXXXX------XXEFAEGQYAGKEGDLEGDTT--GVVDPAAVGXXXXXXXXXXXXSGYKPTPDQYQSQPRPSRDKRVSTDVVVGGVAAGRPAGRSPAAGGVGVAGETRGAERSPPPTGKAGSQGERGVSFSLSPPAGGRGGSNPPQGSRKXXXXXXXXXXXXXXXXXPADRRAAAMGEKHEDEDGDVEMELESAVGVGGEAQGRRNDNAAVGQESAELPRILRRPAGAAAAAA-----DRTTIDGARDARGASAASTGSGRIGGAGGRPSIATDGRRSSAGRASGGAGVFNSDEAGEDGRSSGSTAFGERPGGGGGFSMGAAEGIVASRIAAYDPFSYSQKDAQSSGGTPRHADM 857
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12943.2417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH38_ECTSI2.050e-17077.11Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12943contigEcto-sp13_S_contig12943:1167..4132 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12943.2417.1mRNA_Ecto-sp13_S_contig12943.2417.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12943 1167..4132 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12943.2417.1 ID=prot_Ecto-sp13_S_contig12943.2417.1|Name=mRNA_Ecto-sp13_S_contig12943.2417.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=460bp
NRRKSTPFIRRPPPAYGPESVGGMVVFDSAGSGSATGSASGSFSGSGSRQ
LHRSPTHPQEAPGGSRGKDSRRGAAPTNGHRDTNGGGIPRERSATRRVDQ
QQQQQQQQQQQLQRKPRERVREFAEGQYAGKEGDLEGDNTAVGVVIDAAA
VGGGGGLRGGGGSGYKPTPDQYHNQPQSSREKRVSTDVLVGGVAAERPAG
RSPTAGGVGIGGGTRGAERSPPPTGKAGSQGGRGVSFSLSPPAGGRVGSN
PPQAVRKGGSQSPPQQQQRGGTSSPGDRRAAAEKHEDEDGDVEMELESAV
GVGGEGQGRRNEDAAVGQESAEVPRILRRPAGASAAAAAAAAADRATMDG
ARDARNASAASTGSGRIGGAGRPTVASDGRRSSAGRASGGAGAFNSNEAG
EDGRSSGSTAFTERPGGGGGFSMGAAEGIVASRIAAYDPFSYSQKDAQSS
AGTPRHADM*
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