mRNA_Ecto-sp13_S_contig12941.2415.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12941.2415.1
Unique NamemRNA_Ecto-sp13_S_contig12941.2415.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12941.2415.1 vs. uniprot
Match: D7G115_ECTSI (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G115_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 9.500e-47
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 1
Query:    1 RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKNSRKYVDDCAMLLQEFIDAAVKPGRRTKLFSTE 246
            RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKNSRKYVDDCAMLLQEFIDAAVKP RRTKLFSTE
Sbjct:  167 RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKNSRKYVDDCAMLLQEFIDAAVKPSRRTKLFSTE 248          
BLAST of mRNA_Ecto-sp13_S_contig12941.2415.1 vs. uniprot
Match: A0A835YTM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTM7_9STRA)

HSP 1 Score: 128 bits (321), Expect = 4.540e-34
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1
Query:    1 RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKNSRKYVDDCAMLLQEFIDAAVKPGRRTKLF--STEA 249
            RYPVIL+SEEK  A ++T AF Q VCGFDILRVQGRSFVCDVNGWSFVKNSRKY +DCA+LL EF +AAVKP RR +L   +TEA
Sbjct:  263 RYPVILSSEEKAIASRVTQAFGQAVCGFDILRVQGRSFVCDVNGWSFVKNSRKYHEDCALLLMEFCEAAVKPSRRVELLYAATEA 347          
BLAST of mRNA_Ecto-sp13_S_contig12941.2415.1 vs. uniprot
Match: I2CQY1_NANGC (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQY1_NANGC)

HSP 1 Score: 122 bits (305), Expect = 6.680e-32
Identity = 54/74 (72.97%), Postives = 65/74 (87.84%), Query Frame = 1
Query:    1 RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKNSRKYVDDCAMLLQEFIDAAVKPGR 222
            R+PVIL++ EKE ARK+ LAF+Q VCGFD+LRVQGRSFVCDVNGWSFVKN+RKY DDC  LL E+I AA++PG+
Sbjct:  245 RFPVILSAAEKEIARKVCLAFKQTVCGFDLLRVQGRSFVCDVNGWSFVKNNRKYYDDCGQLLSEYISAALEPGK 318          
BLAST of mRNA_Ecto-sp13_S_contig12941.2415.1 vs. uniprot
Match: A0A6H5L3W2_9PHAE (PPIP5K2_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W2_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 2.850e-29
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query:    1 RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKNSRK 159
            RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKNSRK
Sbjct:  186 RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKNSRK 238          
BLAST of mRNA_Ecto-sp13_S_contig12941.2415.1 vs. uniprot
Match: A0A7R9YB21_9STRA (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB21_9STRA)

HSP 1 Score: 109 bits (273), Expect = 4.180e-26
Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 1
Query:    1 RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQ-GRSFVCDVNGWSFVKNSRKYVDDCAMLLQEFIDAAVKP 216
            R+PV+LT+EEK +AR+I L F Q VCGFDILR Q GRS+VCDVNGWSFVK SRKY DDCA L+ EFI A ++P
Sbjct:  201 RFPVLLTTEEKSFARRIVLTFGQTVCGFDILRTQEGRSYVCDVNGWSFVKGSRKYCDDCAQLISEFILAKIRP 273          
BLAST of mRNA_Ecto-sp13_S_contig12941.2415.1 vs. uniprot
Match: A0A5D6XQG7_9STRA (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQG7_9STRA)

HSP 1 Score: 109 bits (272), Expect = 5.700e-26
Identity = 48/71 (67.61%), Postives = 59/71 (83.10%), Query Frame = 1
Query:    1 RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKNSRKYVDDCAMLLQEFIDAAVK 213
            RYPVIL S EKE ARK+ LAF Q VCGFD+LRV+G S+VCDVNGWSFVKNSRKY DDC ++L  ++ +A++
Sbjct:  274 RYPVILNSAEKEIARKVCLAFHQTVCGFDLLRVRGNSYVCDVNGWSFVKNSRKYYDDCGLILHNYLVSALR 344          
BLAST of mRNA_Ecto-sp13_S_contig12941.2415.1 vs. uniprot
Match: A0A7S1XZ73_9STRA (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ73_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.440e-25
Identity = 52/73 (71.23%), Postives = 59/73 (80.82%), Query Frame = 1
Query:    1 RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQ-GRSFVCDVNGWSFVKNSRKYVDDCAMLLQEFIDAAVKP 216
            R+PV+LT EEK +AR+I LAF Q VCGFDILR Q G+S+VCDVNGWSFVK SRKY DDCA LL EF  A V+P
Sbjct:  232 RFPVLLTMEEKSFARRIVLAFGQTVCGFDILRTQEGKSYVCDVNGWSFVKGSRKYYDDCAQLLSEFALAKVQP 304          
BLAST of mRNA_Ecto-sp13_S_contig12941.2415.1 vs. uniprot
Match: A0A3R7J517_9STRA (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J517_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.450e-25
Identity = 47/71 (66.20%), Postives = 59/71 (83.10%), Query Frame = 1
Query:    1 RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKNSRKYVDDCAMLLQEFIDAAVK 213
            RYPVIL S EKE ARK+ LAF Q VCGFD+LRV+G S+VCDVNGWSFVKNS+KY DDC ++L  ++ +A++
Sbjct:  223 RYPVILNSTEKEMARKVCLAFHQTVCGFDLLRVRGNSYVCDVNGWSFVKNSKKYYDDCGLILHNYLVSALR 293          
BLAST of mRNA_Ecto-sp13_S_contig12941.2415.1 vs. uniprot
Match: A0A8K1CUD0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUD0_PYTOL)

HSP 1 Score: 108 bits (269), Expect = 1.450e-25
Identity = 47/71 (66.20%), Postives = 59/71 (83.10%), Query Frame = 1
Query:    1 RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKNSRKYVDDCAMLLQEFIDAAVK 213
            RYPVIL S EKE ARK+ LAF Q VCGFD+LRV+G S+VCDVNGWSFVKNS+KY DDC ++L  ++ +A++
Sbjct:  250 RYPVILNSAEKEIARKVCLAFHQTVCGFDLLRVRGNSYVCDVNGWSFVKNSKKYYDDCGLILHNYLVSALR 320          
BLAST of mRNA_Ecto-sp13_S_contig12941.2415.1 vs. uniprot
Match: A0A2D4BSZ6_PYTIN (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSZ6_PYTIN)

HSP 1 Score: 108 bits (269), Expect = 1.450e-25
Identity = 47/71 (66.20%), Postives = 59/71 (83.10%), Query Frame = 1
Query:    1 RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKNSRKYVDDCAMLLQEFIDAAVK 213
            RYPVIL S EKE ARK+ LAF Q VCGFD+LRV+G S+VCDVNGWSFVKNS+KY DDC ++L  ++ +A++
Sbjct:  247 RYPVILNSAEKEIARKVCLAFHQTVCGFDLLRVRGNSYVCDVNGWSFVKNSKKYYDDCGLILHNYLVSALR 317          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12941.2415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G115_ECTSI9.500e-4798.78Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A835YTM7_9STRA4.540e-3474.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
I2CQY1_NANGC6.680e-3272.97Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A6H5L3W2_9PHAE2.850e-29100.00PPIP5K2_N domain-containing protein n=1 Tax=Ectoca... [more]
A0A7R9YB21_9STRA4.180e-2669.86Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A5D6XQG7_9STRA5.700e-2667.61Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A7S1XZ73_9STRA1.440e-2571.23Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A3R7J517_9STRA1.450e-2566.20Inositol hexakisphosphate and diphosphoinositol-pe... [more]
A0A8K1CUD0_PYTOL1.450e-2566.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BSZ6_PYTIN1.450e-2566.20Inositol hexakisphosphate and diphosphoinositol-pe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12941contigEcto-sp13_S_contig12941:3936..4589 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score168.7
Seed ortholog evalue1.1e-39
Seed eggNOG ortholog2880.D7G115
Model size249
KEGG rclassRC00002
KEGG koko:K13024
KEGG ReactionR05799,R08964
KEGG Pathwayko04070,map04070
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.diphosphoinositol-pentakisphosphate kinase activity
EggNOG OGsKOG1057@1,KOG1057@2759
EC2.7.4.24
Cds size249
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462692.130833-CDS-Ecto-sp13_S_contig12941:3935..40261681462692.130833-CDS-Ecto-sp13_S_contig12941:3935..4026Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12941 3936..4026 -
1681462692.1496842-CDS-Ecto-sp13_S_contig12941:4431..45891681462692.1496842-CDS-Ecto-sp13_S_contig12941:4431..4589Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12941 4432..4589 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12941.2415.1prot_Ecto-sp13_S_contig12941.2415.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12941 3936..4589 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12941.2415.1

>prot_Ecto-sp13_S_contig12941.2415.1 ID=prot_Ecto-sp13_S_contig12941.2415.1|Name=mRNA_Ecto-sp13_S_contig12941.2415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
RYPVILTSEEKEYARKITLAFRQCVCGFDILRVQGRSFVCDVNGWSFVKN
SRKYVDDCAMLLQEFIDAAVKPGRRTKLFSTEA
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mRNA from alignment at Ecto-sp13_S_contig12941:3936..4589-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12941.2415.1 ID=mRNA_Ecto-sp13_S_contig12941.2415.1|Name=mRNA_Ecto-sp13_S_contig12941.2415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=654bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12941:3936..4589- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGTACCCGGTGATCCTGACCTCGGAGGAGAAGGAGTACGCCCGCAAGAT CACCTTGGCGTTCCGTCAGTGCGTGTGCGGGTTCGATATCCTGCGGGTGC AGGGGAGAAGCTTTGTCTGCGACGTGAACGGCTGGAGTTTCGTCAAGAAC AGCAGAAAGTGAGAGGAGGAGAGAAATAATAATCAGTATCTAGCGTATGC GGCCGCTGCTGCTGCTATTGTTGTTGTTGTTGTTCTTGCACTGACAATTA CCTCGGACCTCTACCAATAAGTTGTTGTGATGCTTGATGTTTTGTAATAA GTATGAACAAACACACACAGCGCTTTTTATTTTTGTGTAAACCGGCACTG TCCTACGGTCTGATCAGGGAAACAACGGAGAGGAATCGGCTCGAGTGACA AAAAAAAGTGAAACCCGTACCGCGGCAGAGCTCGTCGTTTTCACTTCTCT CTCTAAGTACGCATGTTTTTGGACTCTTGATTATAAGTTTGTTTTTCTAT CTCGACATTTTGGATTTTTTTTATTCTATTCTCGACGTCCATATTTTCTA CCTAACTCATCAGGTACGTGGACGACTGCGCGATGCTCCTCCAAGAGTTC ATCGACGCGGCGGTCAAGCCCGGCCGACGCACCAAACTATTCTCCACAGA GGCT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12941:3936..4589-

>mRNA_Ecto-sp13_S_contig12941.2415.1 ID=mRNA_Ecto-sp13_S_contig12941.2415.1|Name=mRNA_Ecto-sp13_S_contig12941.2415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=249bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12941:3936..4589- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGTACCCGGTGATCCTGACCTCGGAGGAGAAGGAGTACGCCCGCAAGAT
CACCTTGGCGTTCCGTCAGTGCGTGTGCGGGTTCGATATCCTGCGGGTGC
AGGGGAGAAGCTTTGTCTGCGACGTGAACGGCTGGAGTTTCGTCAAGAAC
AGCAGAAAGTACGTGGACGACTGCGCGATGCTCCTCCAAGAGTTCATCGA
CGCGGCGGTCAAGCCCGGCCGACGCACCAAACTATTCTCCACAGAGGCT
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