mRNA_Ecto-sp13_S_contig12934.2412.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12934.2412.1 vs. uniprot
Match: D7G159_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G159_ECTSI) HSP 1 Score: 558 bits (1437), Expect = 4.460e-197 Identity = 295/338 (87.28%), Postives = 302/338 (89.35%), Query Frame = 1
Query: 1 VQIIKKVIEGGARLDALDAEEYMPIHLAADEGNLPALKELVRAGSDPEWLSGALQPPLANACMSGRTKVAKYLLETCNVDAGTADSVGYTPLAIAAQGGHVTIVRMLLKRGVASLGKNAYRDAITGVAMTGNMEMLRELVYVERGVHLLGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGDTPLDVVDTKRSPQVRHGVGRRRVRRMLLQGPAYRVLSWRWPASPAFETTPDSAAAMGGAALALPGLDAAEPGSAKNAAQVVPDPETEEEWVDIDESFDEAFASAMAGSWRLNLNVPVFRRSRPXXXXCGSDDGSSPVEQRAALVSRFE 1014
VQIIKKVIEGGARLDALDAEEYMPIHLAADEGNLPALKELVRAGSDPEW SGALQPPLANACMSGRTKVAKYLLETCNVDAGTADSVGYTPLAI+AQGGHV+IVRMLLKRGVA LGKNAYRDAITGVAMTGNMEMLRELVYVE GVHLLGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNG TPLDVVDTKRSPQ GPAYR LSWRWPAS AFETTPDSAAA GGAALALPGLDAAEPGSAK+AAQ+VP PETE+EWVD DESFDEAFASA+AGSWRLN V VFRRSRP CGS+ G VEQRAALVSRFE
Sbjct: 127 VQIIKKVIEGGARLDALDAEEYMPIHLAADEGNLPALKELVRAGSDPEWRSGALQPPLANACMSGRTKVAKYLLETCNVDAGTADSVGYTPLAISAQGGHVSIVRMLLKRGVALLGKNAYRDAITGVAMTGNMEMLRELVYVEGGVHLLGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGGTPLDVVDTKRSPQ----------------GPAYRALSWRWPASSAFETTPDSAAATGGAALALPGLDAAEPGSAKDAAQLVPYPETEKEWVDSDESFDEAFASAVAGSWRLN--VAVFRRSRPPPPPCGSEGGYPAVEQRAALVSRFE 446
BLAST of mRNA_Ecto-sp13_S_contig12934.2412.1 vs. uniprot
Match: A0A6H5K5E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5E4_9PHAE) HSP 1 Score: 399 bits (1024), Expect = 1.630e-137 Identity = 212/234 (90.60%), Postives = 217/234 (92.74%), Query Frame = 1
Query: 316 MLLKRGVASLGKNAYRDAITGVAMTGNMEMLRELVYVERGVHLLGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGDTPLDVVDTKRSPQVRHGVGRRRVRRMLLQGPAYRVLSWRWPASPAFETTPDSAAAMGGAALALPGLDAAEPGSAKNAAQVVPDPETEEEWVDIDESFDEAFASAMAGSWRLNLNVPVFRRSRPXXXXCGSDDGSSPVEQRAALVSRFER 1017
MLLKRGVA LG NAYRDAITGVAMTGN+EMLRELVYVE GVHLLGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGDTPL+VVDTKRSPQVRHGVGRRRVRRMLLQGPAYR LSWRWPASPAFETTPDSAAAMGGAALALPGLDAAEPGSAKNAAQ++P PETE+EWVD DESFDEAFASAMAGSWRLNLNV VFRRSRPXXXX EQRAALVSRFER
Sbjct: 1 MLLKRGVAFLGTNAYRDAITGVAMTGNIEMLRELVYVEGGVHLLGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVDRNGDTPLNVVDTKRSPQVRHGVGRRRVRRMLLQGPAYRALSWRWPASPAFETTPDSAAAMGGAALALPGLDAAEPGSAKNAAQLIPYPETEKEWVDRDESFDEAFASAMAGSWRLNLNVAVFRRSRPXXXXXXXXXXXXXAEQRAALVSRFER 234
BLAST of mRNA_Ecto-sp13_S_contig12934.2412.1 vs. uniprot
Match: A0A6H5KGP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP8_9PHAE) HSP 1 Score: 137 bits (346), Expect = 8.400e-36 Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 1
Query: 1 VQIIKKVIEGGARLDALDAEEYMPIHLAADEGNLPALKELVRAGSDPEWLSGALQPPLANACMSGRTK 204
VQII+KVIEGGARLDALDAEEYMPIHLAADEGNLPALKELVRAGSDPEWLSGALQPPLANACMSGRTK
Sbjct: 127 VQIIQKVIEGGARLDALDAEEYMPIHLAADEGNLPALKELVRAGSDPEWLSGALQPPLANACMSGRTK 194
BLAST of mRNA_Ecto-sp13_S_contig12934.2412.1 vs. uniprot
Match: UPI001DB6CE87 (Ankyrin-1 n=1 Tax=Passalora fulva TaxID=5499 RepID=UPI001DB6CE87) HSP 1 Score: 63.5 bits (153), Expect = 1.970e-7 Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = 1
Query: 10 IKKVIEGGARLDALDAEEYMPIHLAADEGNLPALKELVRAGSDPEW--LSGALQPPLANACMSGRTKVAKYLLETCNVDAGTADSVGYTPLAIAAQGGHVTIVRMLLKRG 333
+ + I A L DA+ P+H AA EG L ALK L+ G+D E ++ PL AC R + AK+L+E D D+ G PL AA G + I+++LL G
Sbjct: 14 VAQAIARSADLHHTDADGMQPVHTAAKEGYLEALKTLLSLGADVETEAVNDKSSRPLHLACEHKRPRTAKHLIEVAKADIHAPDTTGNKPLNRAAIKGDLQIIKLLLAAG 123
BLAST of mRNA_Ecto-sp13_S_contig12934.2412.1 vs. uniprot
Match: A0A6H5HWJ0_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5HWJ0_9HYME) HSP 1 Score: 60.8 bits (146), Expect = 1.550e-6 Identity = 58/208 (27.88%), Postives = 91/208 (43.75%), Query Frame = 1
Query: 22 IEGGARLDALDAEEYMPIHLAADEGNLPALKELVRAGSDPEWLSGALQPPLANACMSGRT--------KVAKYLLETCNVDAGTADSVGYTPLAIAAQGGHVTIVRMLLKRGVASLGKNAYRDAITGVAMTGNME----MLRELVYVERGVHL---LGAKTSQLMTALHFSAGYCHARATA-LLLHAGADEGAVDRNGDTPLDVVDTK 597
I ++DA D P+HLAA G L ++ L++ +DP + PL C + K+ + + VDA D G TPL +AA GG++ +V +LLKR N + +T + + E + R+ V + + A+ + + LHF+ C R +LLH GAD + G TPL +V K
Sbjct: 330 IPTSVQVDAKDRFGNTPLHLAAAGGYLILVELLLKRQADPNSTNEEGLTPLHVICTRNKDDGLLKEFFKIVDEIPTSVQVDA--KDRFGNTPLHLAAAGGYLILVELLLKRQADPNSTN--EEGLTPLHVICKREVDGGLARQFFMVADDMKKQVRINAQDKKGNSPLHFALSRCRNRGLVEVLLHRGADPNLANEEGQTPLHLVCNK 533
BLAST of mRNA_Ecto-sp13_S_contig12934.2412.1 vs. uniprot
Match: UPI0009C18AD5 (ankyrin repeat domain-containing protein 1-like isoform X4 n=2 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009C18AD5) HSP 1 Score: 58.2 bits (139), Expect = 2.060e-6 Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 1
Query: 64 YMPIHLAADEGNLPALKELVRAGSDPEWLSGALQP-PLANACMSGRTKVAKYLLETCNVDA------GTADSVGYTPLAIAAQGGHVTIVRMLLKRGVASLGKN 354
Y +HL G LP ++ L+ G++ E SG L+ PL +AC G T+V ++L+ T T D G TPL +AA GGH+ +V +L++ G + N
Sbjct: 86 YTALHLTCMLGFLPCVQLLLERGANLEVASGLLRMFPLHSACKGGSTEVVEFLINTVPYSEVVKRILNTGDKDGDTPLHLAALGGHLELVPLLVREGASLTAAN 189
BLAST of mRNA_Ecto-sp13_S_contig12934.2412.1 vs. uniprot
Match: UPI001E1CB8BC (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CB8BC) HSP 1 Score: 60.5 bits (145), Expect = 2.700e-6 Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 1
Query: 43 DALDAEEYMPIHLAADEGNLPALKELVRAGSDPEWLSGALQPPLANACMSGRTKVAKYLLETCNVDAGTADSVGYTPLAIAAQGGHVTIVRMLLK--RGVASLGKN 354
DAL ++ P+HLAA+ G L L++ G+D + A Q + A M ++V K L+T TAD G T IAAQ G V +VR L++ RGV GKN
Sbjct: 825 DALTLKKQTPLHLAAEAGQLEVCDTLLQLGADTNATNDAGQKAVHVAAMRNNSEVVKLFLKTSPELVTTADKDGNTCAHIAAQQGSVDVVRELMRHNRGVVINGKN 930
BLAST of mRNA_Ecto-sp13_S_contig12934.2412.1 vs. uniprot
Match: UPI0009BE2CC7 (ankyrin repeat domain-containing protein 1-like isoform X1 n=2 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009BE2CC7) HSP 1 Score: 58.2 bits (139), Expect = 3.270e-6 Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 1
Query: 64 YMPIHLAADEGNLPALKELVRAGSDPEWLSGALQP-PLANACMSGRTKVAKYLLETCNVDA------GTADSVGYTPLAIAAQGGHVTIVRMLLKRGVASLGKN 354
Y +HL G LP ++ L+ G++ E SG L+ PL +AC G T+V ++L+ T T D G TPL +AA GGH+ +V +L++ G + N
Sbjct: 121 YTALHLTCMLGFLPCVQLLLERGANLEVASGLLRMFPLHSACKGGSTEVVEFLINTVPYSEVVKRILNTGDKDGDTPLHLAALGGHLELVPLLVREGASLTAAN 224
BLAST of mRNA_Ecto-sp13_S_contig12934.2412.1 vs. uniprot
Match: A0A2K1QXN2_9PEZI (Uncharacterized protein n=1 Tax=Sphaceloma murrayae TaxID=2082308 RepID=A0A2K1QXN2_9PEZI) HSP 1 Score: 59.7 bits (143), Expect = 4.590e-6 Identity = 41/133 (30.83%), Postives = 64/133 (48.12%), Query Frame = 1
Query: 28 GGARLDALDAEEYMPIHLAADEGNLPALKELVRAGSDPEWLSGALQPPLANACMSGRTKVAKYLLETCNVDAGTADSVGYTPLAIAAQGGHVTIVRMLLKR-GVASLGKNAY-RDAITGVAMTGNMEMLRELV 420
G A +DA + + + LA+ A K L+ AG+DP W+ P+ A + LL +VD +G PL +AA GGHV IVR+LL++ G+ +N + R+ VA+ + EL+
Sbjct: 1139 GKADVDAFNRHDQTSLSLASQVSGNEAGKVLIEAGADPAWVDKFAMTPIHYASKQNNVGLMSRLLAIDSVDMHKKTKLGEWPLTLAAAGGHVEIVRLLLRKSGIDVTLQNGFARETALHVAVKNRRTHVVELL 1271
BLAST of mRNA_Ecto-sp13_S_contig12934.2412.1 vs. uniprot
Match: A0A024TBE9_9STRA (Poly [ADP-ribose] polymerase n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBE9_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 8.620e-6 Identity = 53/178 (29.78%), Postives = 78/178 (43.82%), Query Frame = 1
Query: 40 LDALDAEEYMPIHLAADEGNLPALKELVRAGSDPEWLSGALQPPLANACMSGRTKVAKYLLETCNVDAGTADS----VGYTPLAIAAQGGHVTIVRMLLKRGV-ASLGKNAYRDAITGVAMTGNMEMLRELVYVERGVHLLGAKTSQLMTALHFSAGYCHARATALLLHAGADEGAVD 558
L +DA + IH AA LK L++AG D + + PL A GR K LLE D A +G+ PL AAQ GH +V LL +G A+ G + + A G++ ++ L+ +G+ + T L + H + LL+AGA+ AVD
Sbjct: 103 LGQVDAGNWATIHYAAACQGSEPLKRLLQAGVDVSLRTKSKDTPLTIAARLGRLDNVKLLLEHSATDVAAAVESAAWLGFRPLHYAAQNGHDQVVMFLLAKGANANAGTSGKESPLALAAEAGHLNCVQALLQ-HKGI-AVDVFNKVRRTPLMVAVMNGHVQVAVALLNAGANANAVD 278 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12934.2412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12934.2412.1 >prot_Ecto-sp13_S_contig12934.2412.1 ID=prot_Ecto-sp13_S_contig12934.2412.1|Name=mRNA_Ecto-sp13_S_contig12934.2412.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=339bp VQIIKKVIEGGARLDALDAEEYMPIHLAADEGNLPALKELVRAGSDPEWLback to top mRNA from alignment at Ecto-sp13_S_contig12934:2163..4705- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12934.2412.1 ID=mRNA_Ecto-sp13_S_contig12934.2412.1|Name=mRNA_Ecto-sp13_S_contig12934.2412.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12934:2163..4705- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12934:2163..4705- >mRNA_Ecto-sp13_S_contig12934.2412.1 ID=mRNA_Ecto-sp13_S_contig12934.2412.1|Name=mRNA_Ecto-sp13_S_contig12934.2412.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1017bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12934:2163..4705- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |