prot_Ecto-sp13_S_contig12921.2403.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12921.2403.1
Unique Nameprot_Ecto-sp13_S_contig12921.2403.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length457
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12921.2403.1 vs. uniprot
Match: D7FJX7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJX7_ECTSI)

HSP 1 Score: 587 bits (1514), Expect = 2.090e-206
Identity = 385/471 (81.74%), Postives = 399/471 (84.71%), Query Frame = 0 
Query:    1 MMTNSGGLKRGRSDGIPDHENVKRVKTTAEPPGTLPTFGAGEVAGTTSSPAAAAATP-PTKQ------------GLWDRFDRVVFVATAMNTDGSGLSACLGLDKLRQESAARVAECQAQLQAERDAELLAEQQELFAGLHNLGVLRYAPVAHVARFQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEAFLKSHAGGGXXXXXXXXXXXXXX-AGPAMTSRGTARDMSAEGRPEGCAVGVSSKSAWTEEFLAEQEEAFAAAGEQVRQDLKEFRVLVEGPGAAAHEKLAADMAAAGATEAQFLEEQTVLAERIQQWQRREFVGANGGAVAGNPALADALAGEVGADRVGGATTTGGREIEEMGLVVGGPLGTIVEGEEEEXXXXXEGNRRQGFGTVSGKRRARFSIDGDCRSDTSSMGATDGEMSDLSPERAVRKGKTSLDAGAGKRKRGGEDAELAPEVRR 457
            MMTNSGGLKRGRSDG+PDHE+VKRVK TAE P TLPTFGAGEV GTTSS         PTKQ            G WDR +RVVFVATAMNTDGSGLSACLGLDKLRQESAARVAECQAQL        LAEQQELFAGLHNLGVLRYAPVAHVARFQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EEEAFL+SHAGGG               AGPAMTS GTAR+MS EGRPEGCA GVSSKSAWTEEFLAEQEEAFAAAGEQVRQDLKEFRVLVEGPGAAAHEKLAADMAAAGATEA+FLEEQTVLAERIQQWQRREFVGANGGAVAGNPALADAL G+VGAD VGGATT GG+ IEEMGLVVGGPLGTIVE E   XXXXX  + ++GFGTVSGKR ARF+IDGDC SDTSSMG TDGEMSDLSPERAVRKGKTSLDAGA KRKRG EDAE+  EV+R
Sbjct:    1 MMTNSGGLKRGRSDGVPDHEDVKRVKITAEHPETLPTFGAGEVVGTTSSXXXXXXXXAPTKQAXXXXXXXXXXXGPWDRINRVVFVATAMNTDGSGLSACLGLDKLRQESAARVAECQAQLXXXXXXXXLAEQQELFAGLHNLGVLRYAPVAHVARFQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEEEAFLRSHAGGGAGPAAAAAPPAVRARAGPAMTSAGTAREMSTEGRPEGCAAGVSSKSAWTEEFLAEQEEAFAAAGEQVRQDLKEFRVLVEGPGAAAHEKLAADMAAAGATEAEFLEEQTVLAERIQQWQRREFVGANGGAVAGNPALADALDGKVGADGVGGATTPGGQGIEEMGLVVGGPLGTIVEEEXXXXXXXXGNSGQEGFGTVSGKRPARFAIDGDCGSDTSSMGVTDGEMSDLSPERAVRKGKTSLDAGAAKRKRGAEDAEVTLEVKR 471
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12921.2403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJX7_ECTSI2.090e-20681.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12921contigEcto-sp13_S_contig12921:2395..4109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12921.2403.1mRNA_Ecto-sp13_S_contig12921.2403.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12921 2395..4109 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12921.2403.1 ID=prot_Ecto-sp13_S_contig12921.2403.1|Name=mRNA_Ecto-sp13_S_contig12921.2403.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=457bp
MMTNSGGLKRGRSDGIPDHENVKRVKTTAEPPGTLPTFGAGEVAGTTSSP
AAAAATPPTKQGLWDRFDRVVFVATAMNTDGSGLSACLGLDKLRQESAAR
VAECQAQLQAERDAELLAEQQELFAGLHNLGVLRYAPVAHVARFQEELSA
EQQELWHVAEGLRGLRKGPAGRVARCREEFRIEEEAFLKSHAGGGAGPAA
AAAAAARARAGPAMTSRGTARDMSAEGRPEGCAVGVSSKSAWTEEFLAEQ
EEAFAAAGEQVRQDLKEFRVLVEGPGAAAHEKLAADMAAAGATEAQFLEE
QTVLAERIQQWQRREFVGANGGAVAGNPALADALAGEVGADRVGGATTTG
GREIEEMGLVVGGPLGTIVEGEEEEERDEEEGNRRQGFGTVSGKRRARFS
IDGDCRSDTSSMGATDGEMSDLSPERAVRKGKTSLDAGAGKRKRGGEDAE
LAPEVRR
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