prot_Ecto-sp13_S_contig12914.2397.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12914.2397.1
Unique Nameprot_Ecto-sp13_S_contig12914.2397.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length344
Homology
BLAST of mRNA_Ecto-sp13_S_contig12914.2397.1 vs. uniprot
Match: D8LQ40_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ40_ECTSI)

HSP 1 Score: 594 bits (1532), Expect = 1.450e-212
Identity = 321/343 (93.59%), Postives = 328/343 (95.63%), Query Frame = 0
Query:    1 DEDDXXXXXXXXYEVDYANMNVSPEILRMLGASEEVIAAKEAEVSGVTSTWVPPTETGLEHSSAIANSAAVXXXXXXXXXXXXVERVFKAVGSFDKDAEDAADAGERAPVLKVKVAHAPEPVPKKRESKLPPKSEDNWSDDDGSEDSWDEASAIDGHAWWESGSDDEELETAAMSHNLRVALGLATAGEVATAETGGGGDGNGDWRPPSFAGLDNSKPLTTLMPLVIGQQKGLEIEYKKKMGEGEAEGGEGGDGDEEWSEEEGWDYEDVPDDEYLLDWSTSISPNLAKAMGRRASTEHKALALSEELSWKPPMSSGLKNSAPIIDSSQLSSFKNKTTRRLSLS 343
            DED XXXXXXXXYEVDYA+MNVSPEILRMLGASEEVIAAKEAEVSGVTSTWVPPTETGLEHSSAIA+SAAV            VERVFKAVGSFDKDAEDAA AGERAPVLKVKVAHAPEPVPKKRESKLPPKSED+WSDDDGSEDSWDEASAIDGHAWWESGSDDEELETAAMSHNLRVALGLATAGEVATAETG GGDGNGDWRPPSFAGLDNSKPLTTLMPLVIGQQKGLEIEYKKKMGEGEAEGGEGGDGDEEWSEEEGWDYEDVPD+EYLLDWSTSISPNLAKAMGRRASTEHKALALSEELSWKPPMSSGLKNSAPII++SQLSSFKN+TTRRLSLS
Sbjct:   36 DEDXXXXXXXXXYEVDYASMNVSPEILRMLGASEEVIAAKEAEVSGVTSTWVPPTETGLEHSSAIADSAAVAIGGSGAPGGGGVERVFKAVGSFDKDAEDAAAAGERAPVLKVKVAHAPEPVPKKRESKLPPKSEDSWSDDDGSEDSWDEASAIDGHAWWESGSDDEELETAAMSHNLRVALGLATAGEVATAETGSGGDGNGDWRPPSFAGLDNSKPLTTLMPLVIGQQKGLEIEYKKKMGEGEAEGGEGGDGDEEWSEEEGWDYEDVPDEEYLLDWSTSISPNLAKAMGRRASTEHKALALSEELSWKPPMSSGLKNSAPIIEASQLSSFKNRTTRRLSLS 378          
BLAST of mRNA_Ecto-sp13_S_contig12914.2397.1 vs. uniprot
Match: D8LQ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ41_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 6.120e-48
Identity = 109/232 (46.98%), Postives = 136/232 (58.62%), Query Frame = 0
Query:   13 YEVDYANMNVSPEILRMLGASEEVIAAKEAEVSGVTSTWVPPTETGLEHSSAI-ANSAAVXXXXXXXXXXXXVERVFKAVGSFDKDAEDAADAGERAPVLKVKVAHAPEPVPKKRESKLPPKSEDNWSDDDGSEDSWDEASAIDGHAWWESGSDDEELET-AAMSHNLRVALGLA--TAGEVATAETGGGGDGNGDWRPPSFAGLDNSKPLTTLMPLVIGQQKGLEIEYKKK 240
            YE+DYA++N +PE+LRMLGASE VIAAKEAEVS + STW PP E GLE+S+ I A+SAAV            V RV K VG FD+DA  AA   + AP  KV                               ++SWDEASA + HAWWESGS+DEE E  +AMS NL+  LGL   +  + A AE G   D   +W PPSFAGL NS+ +T L PLV+G  K  ++EY+ +
Sbjct:   27 YELDYASLNANPELLRMLGASERVIAAKEAEVSAIVSTWAPPPEPGLENSTTIIADSAAVVLGSGKAPCGSGVARVSKLVGGFDQDAAAAAATAQEAPGWKVS----------------------------SKDESWDEASA-NRHAWWESGSEDEEYEMMSAMSPNLQAVLGLRRPSGTDTANAEQG---DNKNEWHPPSFAGLSNSRRVTVLRPLVVGHGKMFDVEYRNR 226          
BLAST of mRNA_Ecto-sp13_S_contig12914.2397.1 vs. uniprot
Match: A0A6H5JS46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS46_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 3.340e-40
Identity = 103/221 (46.61%), Postives = 137/221 (61.99%), Query Frame = 0
Query:  110 VLKVKVAHAPEPVPKKRESKLPPKSED-NWSDDDGSE--DSWDEASAIDGHAWWESGSDDEELET-AAMSHNLRVALGLATAGEVATAETGGGGDGNGDWRPPSFAGLDNSKPLTTLMPLVIGQQKGLEIEYKKKMGEGEAEGGEGGDGDEEWSEEEGWDYEDVPDDEY---LLDWSTSISPNLAKAMGRRASTEHKALALSEELSWKPPMSSGLKNSAPI 323
            V KVK+ H+PEPVP+ R SKL P  +D N SDD+  E  DSWDEASA +GHAWW+SGS+DEE E  +AMS NL+  LGL     +       G D   +W+PPSFAGL+NS  +  L PLV+G  K LE+E + +                     EGWDY+ +  D+Y   + +W+T++SPNLA+A+G  +S E KA ALS++LSW+ P S GL+NS  I
Sbjct:   22 VPKVKIVHSPEPVPRGRASKLLPVPQDSNLSDDNNDEENDSWDEASA-NGHAWWDSGSEDEEYEIMSAMSPNLQAVLGLRRPSGIDPPNEEQG-DNKNEWQPPSFAGLNNSTRVKVLRPLVVGHGKMLEVECRNRXXXXXXXXXXXXXXXX-XXXGEGWDYQVMSKDDYDSYVREWNTNVSPNLARALGCPSSMEQKAKALSKQLSWEAPASFGLRNSGYI 239          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12914.2397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQ40_ECTSI1.450e-21293.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LQ41_ECTSI6.120e-4846.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS46_9PHAE3.340e-4046.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12914contigEcto-sp13_S_contig12914:981..4099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12914.2397.1mRNA_Ecto-sp13_S_contig12914.2397.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12914 981..4099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12914.2397.1 ID=prot_Ecto-sp13_S_contig12914.2397.1|Name=mRNA_Ecto-sp13_S_contig12914.2397.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=344bp
DEDDEDDEDGEDYEVDYANMNVSPEILRMLGASEEVIAAKEAEVSGVTST
WVPPTETGLEHSSAIANSAAVAIGGGGAPGGGGVERVFKAVGSFDKDAED
AADAGERAPVLKVKVAHAPEPVPKKRESKLPPKSEDNWSDDDGSEDSWDE
ASAIDGHAWWESGSDDEELETAAMSHNLRVALGLATAGEVATAETGGGGD
GNGDWRPPSFAGLDNSKPLTTLMPLVIGQQKGLEIEYKKKMGEGEAEGGE
GGDGDEEWSEEEGWDYEDVPDDEYLLDWSTSISPNLAKAMGRRASTEHKA
LALSEELSWKPPMSSGLKNSAPIIDSSQLSSFKNKTTRRLSLS*
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