prot_Ecto-sp13_S_contig12909.2394.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12909.2394.1
Unique Nameprot_Ecto-sp13_S_contig12909.2394.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length279
Homology
BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: D8LQQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ6_ECTSI)

HSP 1 Score: 544 bits (1401), Expect = 2.900e-186
Identity = 275/279 (98.57%), Postives = 278/279 (99.64%), Query Frame = 0
Query:    1 RSFYEKLRAGQEDELDGAELAEDIEEDNGPKALTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 279
            RSFYEKLRAGQEDELDGAELAE+IEEDNGPKALTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILA SAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAF+SL+LYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS
Sbjct:  155 RSFYEKLRAGQEDELDGAELAEEIEEDNGPKALTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILAFSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFVSLSLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 433          
BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A835Z4N6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N6_9STRA)

HSP 1 Score: 371 bits (953), Expect = 8.300e-120
Identity = 181/247 (73.28%), Postives = 210/247 (85.02%), Query Frame = 0
Query:   33 LTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 279
            L+  QL  VLKPYFWPKG    A++NR RS+ TWVFVI SK CSVTSPFFLS+ATN+LY+GD     + V LYA+L+ +AK LKE QSL+YLKVKQQAYIEIAE +FAHLHTLSLQWHLKKKMGNV+RSMDRGT+AANNL+TYLFLYLVPAI EC+ATVI+FY  F DWRLATMAF +LTLYGY+TV++TLWRKK R  TNK+DN++HDKATDS+INYETVKYF+NE+FEVAR  ESV+ YQ  S S
Sbjct:   76 LSPRQLVTVLKPYFWPKGDDERAVLNRLRSTATWVFVIGSKACSVTSPFFLSDATNALYNGDYTGAARGVALYALLSFTAKFLKECQSLIYLKVKQQAYIEIAEHTFAHLHTLSLQWHLKKKMGNVIRSMDRGTEAANNLVTYLFLYLVPAIGECVATVIIFYFKFSDWRLATMAFAALTLYGYLTVKITLWRKKLRAVTNKYDNEFHDKATDSMINYETVKYFSNEDFEVARFTESVRNYQLHSTS 322          
BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A7S2UVY2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY2_9STRA)

HSP 1 Score: 328 bits (842), Expect = 1.190e-104
Identity = 164/263 (62.36%), Postives = 208/263 (79.09%), Query Frame = 0
Query:   17 GAELAEDIEEDNGPKALTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 279
            G    E  EED  P+ +   +L  VL+PYFWPK G  NAL++R R++ TW FV +SK CSV SP FL++ATN L +      +  VGLY  LAL++K LKEAQ +VYLKVKQ+AY+EIAE++FAHLH LSLQWHLKKKMGNV+RSMDRGT+AAN L+TYLFLYLVP++AEC+A  IVF ++F  W +A +AF S+ +YG++TV +TLWR+KFRQA+NKHDN++HDKATDSIINYETVKYFTNE +E+ R  ESV++YQ +SVS
Sbjct:   35 GVAQEEGEEEDQIPE-MGFFKLMSVLRPYFWPKSGK-NALVHRIRAAATWFFVGLSKACSVASPVFLASATNDLANAQYRSAVVQVGLYCSLALASKWLKEAQGVVYLKVKQEAYVEIAERTFAHLHNLSLQWHLKKKMGNVIRSMDRGTEAANTLVTYLFLYLVPSLAECLAVCIVFALHFKVWTIALLAFGSVVVYGFLTVNITLWRRKFRQASNKHDNEFHDKATDSIINYETVKYFTNEEYELKRFSESVQKYQHYSVS 295          
BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A7S3UX91_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX91_HETAK)

HSP 1 Score: 325 bits (833), Expect = 1.960e-101
Identity = 163/278 (58.63%), Postives = 202/278 (72.66%), Query Frame = 0
Query:    2 SFYEKLRAGQEDELDGAELAEDIEEDNGPKALTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 279
            + YEKL  G ++E   A +A   +E+   + L  + L RVLKPYFWP G  P A +NR RSS TW FV  SK  +VTSP FL++ATN L  GD    +  +G Y   +   K  KE Q LVYLKVKQ AYIEIA+++FAHLH LSLQWHLKK+MGNV+RSMDRG++AAN L  YLFLYL+P++AEC+A  +VF + F  W +A +AF S+ +YG VTVRVTLWRKKFRQ +NKHDND+HDKATDSIINYETVKYFTNE FE+ R  +SV+ YQ  S++
Sbjct:   73 ALYEKLNTGDDEE---AVVASGADEEGKRRPLGPLALLRVLKPYFWPSGDDPGAFLNRVRSSATWAFVGASKAATVTSPIFLAHATNRLAAGDYQACVTNLGAYVAFSFMGKFFKEMQGLVYLKVKQAAYIEIAQRTFAHLHNLSLQWHLKKRMGNVIRSMDRGSEAANTLTNYLFLYLLPSLAECLAVCVVFALKFRSWEVALLAFCSVCIYGVVTVRVTLWRKKFRQRSNKHDNDFHDKATDSIINYETVKYFTNEPFEIRRFTDSVRLYQENSIN 347          
BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A6H5KJY8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY8_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 1.210e-95
Identity = 151/155 (97.42%), Postives = 155/155 (100.00%), Query Frame = 0
Query:  125 KVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 279
            +VKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAF++L+LYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS
Sbjct:    4 RVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFVALSLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 158          
BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: I2CPG9_NANGC (Atp-binding cassette superfamily (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPG9_NANGC)

HSP 1 Score: 273 bits (699), Expect = 1.540e-87
Identity = 135/250 (54.00%), Postives = 180/250 (72.00%), Query Frame = 0
Query:   33 LTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHG---DLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 279
            LT  QL  +LKPYFWP    P+  +NR R   TWVF+I SKV SV SP FLS AT++L      D      Y G+Y +L+  ++ LKE Q+LVYL VK+ AY EI   +F+HL  LSL WHLKKK+G V+R+MDRGTDAA+ ++TYLFLYL+PA+ EC+A  I+F V+F  W L+ + F SL LYG+VT+R+TLWRKKFR+ATN+ DN+ H++ATD+++ +E VK FTNE FE  R  E+V+ YQ++SV+
Sbjct:    3 LTFRQLLFILKPYFWPSRLMPSWCLNRIRCVSTWVFIIGSKVSSVYSPLFLSLATSALSSSPGPDYSRASLYAGVYCLLSFGSRFLKECQNLVYLDVKKVAYAEICSSTFSHLLNLSLHWHLKKKIGVVIRAMDRGTDAADTVVTYLFLYLLPALGECLAVCIIFLVHFQQWELSLLLFSSLLLYGFVTIRITLWRKKFREATNQKDNEIHERATDTLVCFEMVKAFTNEEFERGRFTEAVRAYQKYSVT 252          
BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A0G4FKX7_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FKX7_VITBC)

HSP 1 Score: 283 bits (723), Expect = 2.150e-85
Identity = 140/258 (54.26%), Postives = 186/258 (72.09%), Query Frame = 0
Query:   25 EEDNGPKALTIMQLARVLKPYFWPKG---GTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 279
            EE+     L++  L +VL+PYFWP+    G  + + NR R   TW+ V+ SK C+V +P FL  A N+L  G +G  + YV L+  L  S KALKE QSL+Y+KV+Q AYIEIA+ +F HLH LSLQWHLKK+MGNV+RSMDRG DAAN+L+T+  LYL+P++AEC A  +VF ++F  W LA +   +L +YG +TV+VTLWR+KFR   NK DN +HD ATDS+IN+ETVKYFTNE FE+ R  E+V++YQRF V+
Sbjct:  186 EEEQYSSELSVWSLLKVLRPYFWPRSSVDGKGSTMWNRIRCLSTWLCVVGSKTCNVCAPAFLGFAVNALTDGRVGGLITYVVLFGFLTFSGKALKECQSLLYIKVQQAAYIEIAQHTFQHLHNLSLQWHLKKRMGNVIRSMDRGCDAANSLMTWGVLYLIPSVAECFAVCVVFLLHFQKWELAALLAGALLIYGILTVKVTLWRRKFRTEANKKDNRFHDIATDSLINFETVKYFTNEPFELDRFCEAVRDYQRFGVA 443          
BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A7S2SDW9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SDW9_9STRA)

HSP 1 Score: 274 bits (700), Expect = 9.720e-83
Identity = 135/258 (52.33%), Postives = 186/258 (72.09%), Query Frame = 0
Query:   24 IEEDNGPKALTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYH--GDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 279
            ++ D  P+ L+   +A+V+KPYFWPKG     ++N+ R  +TWVF+ +SK  ++ +P ++   T  L        E    + +Y  LALS+K  KE Q+ VYLKVKQ AY+EIAEQ+F HLH+LSL+WH+KKKMGNV+RSMDRG  AA+ ++TYLFLYLVP++AEC    ++FY +F+   L+  AF+S   Y  +TV++TLWRKKFR+ TNKHDNDYHDKATDS+INYETVKYFT E +E+ R  ES+ ++Q +SV+
Sbjct:  213 VDADEKPQ-LSTGGMAKVMKPYFWPKG-----ILNKIRCCLTWVFLGLSKGANLMTPIYIGKVTQGLSEPTAPQSEVFTNIFIYCGLALSSKNFKELQNAVYLKVKQTAYVEIAEQTFTHLHSLSLEWHVKKKMGNVLRSMDRGVQAADTVVTYLFLYLVPSVAECTIVFVIFYSHFNIPTLSATAFMSFVFYAILTVQITLWRKKFREKTNKHDNDYHDKATDSLINYETVKYFTAEQYEIDRYTESIYKFQAYSVN 464          
BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A0K6S8V7_9ALVE (Uncharacterized protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S8V7_9ALVE)

HSP 1 Score: 276 bits (706), Expect = 7.310e-82
Identity = 142/254 (55.91%), Postives = 180/254 (70.87%), Query Frame = 0
Query:   33 LTIMQLARVLKPYFWPKGGTPN---ALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYH---------GDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQ 274
            LT  Q+ +VL+PYFWP  G  +      NR R   TW FVI SK C+  +P F+  A+ SL           G L +T  +VGLY   +  +KALKE Q LVYL+VKQ AYIEIA+ +F HL  LSLQWHLKKKMGNVVRSMDRGT+AA++L+TYLFLYL+P + ECIA  I+F+  F    LA++ FLSL++YGY+TV++TLWR+KFR   NK DN +HD ATD++INYETVKYFTNE FE+AR   +V++YQ
Sbjct:  236 LTFWQIMKVLRPYFWPSSGVDHQGAVFWNRVRCLSTWFFVIGSKACNAIAPLFIGLASASLREALDDAEGRSGHLYDTALWVGLYGAFSFLSKALKECQGLVYLRVKQAAYIEIAQFTFEHLQRLSLQWHLKKKMGNVVRSMDRGTEAADSLMTYLFLYLLPTVGECIAVCIIFFSYFKSPTLASLLFLSLSVYGYLTVKMTLWRRKFRAEANKKDNRFHDLATDALINYETVKYFTNEPFEIARFCAAVRDYQ 489          
BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A7S2KN46_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2KN46_9DINO)

HSP 1 Score: 269 bits (688), Expect = 7.910e-82
Identity = 135/258 (52.33%), Postives = 180/258 (69.77%), Query Frame = 0
Query:   32 ALTIMQLARVLKPYFWPKGGT-PNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLY---------HGDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 279
            AL++ Q  +VLKPYFWP  G     L+NR R+ MTW FV  SKVCS+ +P FL+ ATN +          H    + +  + LYA + L +KALKEAQSL+Y+KV+Q AYIEIA+Q+FAHLH LSL WHL+KKMGNVVRSMDRG  AA   + Y+FLYL P +AE +A  ++F  +F + RLA     +L LY Y TV+VTLWRK+FR AT KHDN+ HD+ TDS++NYET+KYFT E +E    +  V+++Q++S++
Sbjct:   91 ALSVWQTLKVLKPYFWPSTGKFQEVLINRFRACMTWAFVAFSKVCSIVAPIFLARATNQISDLLKEGPGPHSMTSDIITNLVLYAWMILLSKALKEAQSLIYIKVQQAAYIEIADQTFAHLHNLSLDWHLRKKMGNVVRSMDRGIQAAQQTMQYVFLYLFPTLAEALAVTLIFMFHFRNARLAVFVGFNLFLYCYATVKVTLWRKRFRSATTKHDNELHDRLTDSLVNYETIKYFTAEEYERREYRNVVQKFQKYSMA 348          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQQ6_ECTSI2.900e-18698.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z4N6_9STRA8.300e-12073.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UVY2_9STRA1.190e-10462.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UX91_HETAK1.960e-10158.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KJY8_9PHAE1.210e-9597.42ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
I2CPG9_NANGC1.540e-8754.00Atp-binding cassette superfamily (Fragment) n=1 Ta... [more]
A0A0G4FKX7_VITBC2.150e-8554.26Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S2SDW9_9STRA9.720e-8352.33Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A0K6S8V7_9ALVE7.310e-8255.91Uncharacterized protein n=2 Tax=Chromera velia CCM... [more]
A0A7S2KN46_9DINO7.910e-8252.33Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 23..279
e-value: 9.4E-64
score: 217.7
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 58..277
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 67..277
e-value: 1.5E-22
score: 80.6
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 67..279
score: 23.752
NoneNo IPR availablePANTHERPTHR24221:SF187ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 7, MITOCHONDRIALcoord: 23..275
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 220..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 196..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..115
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..195
NoneNo IPR availableTMHMMTMhelixcoord: 65..87
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 172..194
NoneNo IPR availableTMHMMTMhelixcoord: 204..224
IPR039421Type I protein exporterPANTHERPTHR24221FAMILY NOT NAMEDcoord: 23..275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12909contigEcto-sp13_S_contig12909:2..4276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12909.2394.1mRNA_Ecto-sp13_S_contig12909.2394.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12909 2..4276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12909.2394.1 ID=prot_Ecto-sp13_S_contig12909.2394.1|Name=mRNA_Ecto-sp13_S_contig12909.2394.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=279bp
RSFYEKLRAGQEDELDGAELAEDIEEDNGPKALTIMQLARVLKPYFWPKG
GTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMK
YVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWH
LKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDD
WRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINY
ETVKYFTNENFEVARVKESVKEYQRFSVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036640ABC1_TM_sf
IPR011527ABC1_TM_dom
IPR039421Type_I_exporter