mRNA_Ecto-sp13_S_contig12909.2394.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12909.2394.1
Unique NamemRNA_Ecto-sp13_S_contig12909.2394.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: D8LQQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ6_ECTSI)

HSP 1 Score: 544 bits (1401), Expect = 2.900e-186
Identity = 275/279 (98.57%), Postives = 278/279 (99.64%), Query Frame = 1 
Query:    1 RSFYEKLRAGQEDELDGAELAEDIEEDNGPKALTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 837
            RSFYEKLRAGQEDELDGAELAE+IEEDNGPKALTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILA SAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAF+SL+LYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS
Sbjct:  155 RSFYEKLRAGQEDELDGAELAEEIEEDNGPKALTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILAFSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFVSLSLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 433
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BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A835Z4N6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N6_9STRA)

HSP 1 Score: 371 bits (953), Expect = 8.300e-120
Identity = 181/247 (73.28%), Postives = 210/247 (85.02%), Query Frame = 1 
Query:   97 LTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 837
            L+  QL  VLKPYFWPKG    A++NR RS+ TWVFVI SK CSVTSPFFLS+ATN+LY+GD     + V LYA+L+ +AK LKE QSL+YLKVKQQAYIEIAE +FAHLHTLSLQWHLKKKMGNV+RSMDRGT+AANNL+TYLFLYLVPAI EC+ATVI+FY  F DWRLATMAF +LTLYGY+TV++TLWRKK R  TNK+DN++HDKATDS+INYETVKYF+NE+FEVAR  ESV+ YQ  S S
Sbjct:   76 LSPRQLVTVLKPYFWPKGDDERAVLNRLRSTATWVFVIGSKACSVTSPFFLSDATNALYNGDYTGAARGVALYALLSFTAKFLKECQSLIYLKVKQQAYIEIAEHTFAHLHTLSLQWHLKKKMGNVIRSMDRGTEAANNLVTYLFLYLVPAIGECVATVIIFYFKFSDWRLATMAFAALTLYGYLTVKITLWRKKLRAVTNKYDNEFHDKATDSMINYETVKYFSNEDFEVARFTESVRNYQLHSTS 322
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BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A7S2UVY2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY2_9STRA)

HSP 1 Score: 328 bits (842), Expect = 1.190e-104
Identity = 164/263 (62.36%), Postives = 208/263 (79.09%), Query Frame = 1 
Query:   49 GAELAEDIEEDNGPKALTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 837
            G    E  EED  P+ +   +L  VL+PYFWPK G  NAL++R R++ TW FV +SK CSV SP FL++ATN L +      +  VGLY  LAL++K LKEAQ +VYLKVKQ+AY+EIAE++FAHLH LSLQWHLKKKMGNV+RSMDRGT+AAN L+TYLFLYLVP++AEC+A  IVF ++F  W +A +AF S+ +YG++TV +TLWR+KFRQA+NKHDN++HDKATDSIINYETVKYFTNE +E+ R  ESV++YQ +SVS
Sbjct:   35 GVAQEEGEEEDQIPE-MGFFKLMSVLRPYFWPKSGK-NALVHRIRAAATWFFVGLSKACSVASPVFLASATNDLANAQYRSAVVQVGLYCSLALASKWLKEAQGVVYLKVKQEAYVEIAERTFAHLHNLSLQWHLKKKMGNVIRSMDRGTEAANTLVTYLFLYLVPSLAECLAVCIVFALHFKVWTIALLAFGSVVVYGFLTVNITLWRRKFRQASNKHDNEFHDKATDSIINYETVKYFTNEEYELKRFSESVQKYQHYSVS 295
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BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A7S3UX91_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX91_HETAK)

HSP 1 Score: 325 bits (833), Expect = 1.960e-101
Identity = 163/278 (58.63%), Postives = 202/278 (72.66%), Query Frame = 1 
Query:    4 SFYEKLRAGQEDELDGAELAEDIEEDNGPKALTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 837
            + YEKL  G ++E   A +A   +E+   + L  + L RVLKPYFWP G  P A +NR RSS TW FV  SK  +VTSP FL++ATN L  GD    +  +G Y   +   K  KE Q LVYLKVKQ AYIEIA+++FAHLH LSLQWHLKK+MGNV+RSMDRG++AAN L  YLFLYL+P++AEC+A  +VF + F  W +A +AF S+ +YG VTVRVTLWRKKFRQ +NKHDND+HDKATDSIINYETVKYFTNE FE+ R  +SV+ YQ  S++
Sbjct:   73 ALYEKLNTGDDEE---AVVASGADEEGKRRPLGPLALLRVLKPYFWPSGDDPGAFLNRVRSSATWAFVGASKAATVTSPIFLAHATNRLAAGDYQACVTNLGAYVAFSFMGKFFKEMQGLVYLKVKQAAYIEIAQRTFAHLHNLSLQWHLKKRMGNVIRSMDRGSEAANTLTNYLFLYLLPSLAECLAVCVVFALKFRSWEVALLAFCSVCIYGVVTVRVTLWRKKFRQRSNKHDNDFHDKATDSIINYETVKYFTNEPFEIRRFTDSVRLYQENSIN 347
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BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A6H5KJY8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY8_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 1.210e-95
Identity = 151/155 (97.42%), Postives = 155/155 (100.00%), Query Frame = 1 
Query:  373 KVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 837
            +VKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAF++L+LYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS
Sbjct:    4 RVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFVALSLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 158
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BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: I2CPG9_NANGC (Atp-binding cassette superfamily (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPG9_NANGC)

HSP 1 Score: 273 bits (699), Expect = 1.540e-87
Identity = 135/250 (54.00%), Postives = 180/250 (72.00%), Query Frame = 1 
Query:   97 LTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHG---DLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 837
            LT  QL  +LKPYFWP    P+  +NR R   TWVF+I SKV SV SP FLS AT++L      D      Y G+Y +L+  ++ LKE Q+LVYL VK+ AY EI   +F+HL  LSL WHLKKK+G V+R+MDRGTDAA+ ++TYLFLYL+PA+ EC+A  I+F V+F  W L+ + F SL LYG+VT+R+TLWRKKFR+ATN+ DN+ H++ATD+++ +E VK FTNE FE  R  E+V+ YQ++SV+
Sbjct:    3 LTFRQLLFILKPYFWPSRLMPSWCLNRIRCVSTWVFIIGSKVSSVYSPLFLSLATSALSSSPGPDYSRASLYAGVYCLLSFGSRFLKECQNLVYLDVKKVAYAEICSSTFSHLLNLSLHWHLKKKIGVVIRAMDRGTDAADTVVTYLFLYLLPALGECLAVCIIFLVHFQQWELSLLLFSSLLLYGFVTIRITLWRKKFREATNQKDNEIHERATDTLVCFEMVKAFTNEEFERGRFTEAVRAYQKYSVT 252
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BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A0G4FKX7_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FKX7_VITBC)

HSP 1 Score: 283 bits (723), Expect = 2.150e-85
Identity = 140/258 (54.26%), Postives = 186/258 (72.09%), Query Frame = 1 
Query:   73 EEDNGPKALTIMQLARVLKPYFWPKG---GTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 837
            EE+     L++  L +VL+PYFWP+    G  + + NR R   TW+ V+ SK C+V +P FL  A N+L  G +G  + YV L+  L  S KALKE QSL+Y+KV+Q AYIEIA+ +F HLH LSLQWHLKK+MGNV+RSMDRG DAAN+L+T+  LYL+P++AEC A  +VF ++F  W LA +   +L +YG +TV+VTLWR+KFR   NK DN +HD ATDS+IN+ETVKYFTNE FE+ R  E+V++YQRF V+
Sbjct:  186 EEEQYSSELSVWSLLKVLRPYFWPRSSVDGKGSTMWNRIRCLSTWLCVVGSKTCNVCAPAFLGFAVNALTDGRVGGLITYVVLFGFLTFSGKALKECQSLLYIKVQQAAYIEIAQHTFQHLHNLSLQWHLKKRMGNVIRSMDRGCDAANSLMTWGVLYLIPSVAECFAVCVVFLLHFQKWELAALLAGALLIYGILTVKVTLWRRKFRTEANKKDNRFHDIATDSLINFETVKYFTNEPFELDRFCEAVRDYQRFGVA 443
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BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A7S2SDW9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SDW9_9STRA)

HSP 1 Score: 274 bits (700), Expect = 9.720e-83
Identity = 135/258 (52.33%), Postives = 186/258 (72.09%), Query Frame = 1 
Query:   70 IEEDNGPKALTIMQLARVLKPYFWPKGGTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYH--GDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 837
            ++ D  P+ L+   +A+V+KPYFWPKG     ++N+ R  +TWVF+ +SK  ++ +P ++   T  L        E    + +Y  LALS+K  KE Q+ VYLKVKQ AY+EIAEQ+F HLH+LSL+WH+KKKMGNV+RSMDRG  AA+ ++TYLFLYLVP++AEC    ++FY +F+   L+  AF+S   Y  +TV++TLWRKKFR+ TNKHDNDYHDKATDS+INYETVKYFT E +E+ R  ES+ ++Q +SV+
Sbjct:  213 VDADEKPQ-LSTGGMAKVMKPYFWPKG-----ILNKIRCCLTWVFLGLSKGANLMTPIYIGKVTQGLSEPTAPQSEVFTNIFIYCGLALSSKNFKELQNAVYLKVKQTAYVEIAEQTFTHLHSLSLEWHVKKKMGNVLRSMDRGVQAADTVVTYLFLYLVPSVAECTIVFVIFYSHFNIPTLSATAFMSFVFYAILTVQITLWRKKFREKTNKHDNDYHDKATDSLINYETVKYFTAEQYEIDRYTESIYKFQAYSVN 464
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BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A0K6S8V7_9ALVE (Uncharacterized protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S8V7_9ALVE)

HSP 1 Score: 276 bits (706), Expect = 7.310e-82
Identity = 142/254 (55.91%), Postives = 180/254 (70.87%), Query Frame = 1 
Query:   97 LTIMQLARVLKPYFWPKGGTPN---ALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYH---------GDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQ 822
            LT  Q+ +VL+PYFWP  G  +      NR R   TW FVI SK C+  +P F+  A+ SL           G L +T  +VGLY   +  +KALKE Q LVYL+VKQ AYIEIA+ +F HL  LSLQWHLKKKMGNVVRSMDRGT+AA++L+TYLFLYL+P + ECIA  I+F+  F    LA++ FLSL++YGY+TV++TLWR+KFR   NK DN +HD ATD++INYETVKYFTNE FE+AR   +V++YQ
Sbjct:  236 LTFWQIMKVLRPYFWPSSGVDHQGAVFWNRVRCLSTWFFVIGSKACNAIAPLFIGLASASLREALDDAEGRSGHLYDTALWVGLYGAFSFLSKALKECQGLVYLRVKQAAYIEIAQFTFEHLQRLSLQWHLKKKMGNVVRSMDRGTEAADSLMTYLFLYLLPTVGECIAVCIIFFSYFKSPTLASLLFLSLSVYGYLTVKMTLWRRKFRAEANKKDNRFHDLATDALINYETVKYFTNEPFEIARFCAAVRDYQ 489
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BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Match: A0A7S2KN46_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2KN46_9DINO)

HSP 1 Score: 269 bits (688), Expect = 7.910e-82
Identity = 135/258 (52.33%), Postives = 180/258 (69.77%), Query Frame = 1 
Query:   94 ALTIMQLARVLKPYFWPKGGT-PNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLY---------HGDLGETMKYVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWHLKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDDWRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINYETVKYFTNENFEVARVKESVKEYQRFSVS 837
            AL++ Q  +VLKPYFWP  G     L+NR R+ MTW FV  SKVCS+ +P FL+ ATN +          H    + +  + LYA + L +KALKEAQSL+Y+KV+Q AYIEIA+Q+FAHLH LSL WHL+KKMGNVVRSMDRG  AA   + Y+FLYL P +AE +A  ++F  +F + RLA     +L LY Y TV+VTLWRK+FR AT KHDN+ HD+ TDS++NYET+KYFT E +E    +  V+++Q++S++
Sbjct:   91 ALSVWQTLKVLKPYFWPSTGKFQEVLINRFRACMTWAFVAFSKVCSIVAPIFLARATNQISDLLKEGPGPHSMTSDIITNLVLYAWMILLSKALKEAQSLIYIKVQQAAYIEIADQTFAHLHNLSLDWHLRKKMGNVVRSMDRGIQAAQQTMQYVFLYLFPTLAEALAVTLIFMFHFRNARLAVFVGFNLFLYCYATVKVTLWRKRFRSATTKHDNELHDRLTDSLVNYETIKYFTAEEYERREYRNVVQKFQKYSMA 348
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12909.2394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQQ6_ECTSI2.900e-18698.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z4N6_9STRA8.300e-12073.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UVY2_9STRA1.190e-10462.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UX91_HETAK1.960e-10158.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KJY8_9PHAE1.210e-9597.42ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
I2CPG9_NANGC1.540e-8754.00Atp-binding cassette superfamily (Fragment) n=1 Ta... [more]
A0A0G4FKX7_VITBC2.150e-8554.26Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S2SDW9_9STRA9.720e-8352.33Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A0K6S8V7_9ALVE7.310e-8255.91Uncharacterized protein n=2 Tax=Chromera velia CCM... [more]
A0A7S2KN46_9DINO7.910e-8252.33Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12909contigEcto-sp13_S_contig12909:2..4276 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score548.1
Seed ortholog evalue2.3e-153
Seed eggNOG ortholog2880.D8LQQ6
Preferred namehmt1
Model size837
KEGG koko:K05661
KEGG TC3.A.1.210
KEGG Pathwayko02010,map02010
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0000166,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006857,GO:0006950,GO:0007034,GO:0008144,GO:0008150,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0015399,GO:0015405,GO:0015440,GO:0015711,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030001,GO:0030554,GO:0031090,GO:0031166,GO:0031224,GO:0031300,GO:0031301,GO:0031310,GO:0032553,GO:0032555,GO:0032559,GO:0033220,GO:0034220,GO:0034486,GO:0034635,GO:0034775,GO:0035443,GO:0035639,GO:0035672,GO:0036094,GO:0036246,GO:0036249,GO:0042221,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0042939,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044604,GO:0046686,GO:0050896,GO:0051179,GO:0051181,GO:0051234,GO:0051716,GO:0055085,GO:0061687,GO:0070887,GO:0071241,GO:0071248,GO:0071276,GO:0071585,GO:0071627,GO:0071628,GO:0071702,GO:0071705,GO:0071993,GO:0071994,GO:0071995,GO:0071996,GO:0072337,GO:0072348,GO:0097159,GO:0097237,GO:0097367,GO:0097501,GO:0098588,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:0098754,GO:0098805,GO:0098849,GO:0098852,GO:1901265,GO:1901363,GO:1904680,GO:1990170,GO:1990748
Exons6
EggNOG free text desc.heme-transporting ATPase activity
EggNOG OGsCOG5265@1,KOG0056@2759
Cds size837
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12909.2394.1prot_Ecto-sp13_S_contig12909.2394.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12909 2..4276 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462690.8004196-CDS-Ecto-sp13_S_contig12909:1..1011681462690.8004196-CDS-Ecto-sp13_S_contig12909:1..101Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12909 2..101 -
1681462690.8116887-CDS-Ecto-sp13_S_contig12909:1004..11711681462690.8116887-CDS-Ecto-sp13_S_contig12909:1004..1171Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12909 1005..1171 -
1681462690.8205426-CDS-Ecto-sp13_S_contig12909:1809..20051681462690.8205426-CDS-Ecto-sp13_S_contig12909:1809..2005Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12909 1810..2005 -
1681462690.8302846-CDS-Ecto-sp13_S_contig12909:2415..25701681462690.8302846-CDS-Ecto-sp13_S_contig12909:2415..2570Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12909 2416..2570 -
1681462690.8398023-CDS-Ecto-sp13_S_contig12909:3268..33411681462690.8398023-CDS-Ecto-sp13_S_contig12909:3268..3341Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12909 3269..3341 -
1681462690.849705-CDS-Ecto-sp13_S_contig12909:4130..42761681462690.849705-CDS-Ecto-sp13_S_contig12909:4130..4276Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12909 4131..4276 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12909.2394.1

>prot_Ecto-sp13_S_contig12909.2394.1 ID=prot_Ecto-sp13_S_contig12909.2394.1|Name=mRNA_Ecto-sp13_S_contig12909.2394.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=279bp
RSFYEKLRAGQEDELDGAELAEDIEEDNGPKALTIMQLARVLKPYFWPKG
GTPNALMNRTRSSMTWVFVIVSKVCSVTSPFFLSNATNSLYHGDLGETMK
YVGLYAILALSAKALKEAQSLVYLKVKQQAYIEIAEQSFAHLHTLSLQWH
LKKKMGNVVRSMDRGTDAANNLITYLFLYLVPAIAECIATVIVFYVNFDD
WRLATMAFLSLTLYGYVTVRVTLWRKKFRQATNKHDNDYHDKATDSIINY
ETVKYFTNENFEVARVKESVKEYQRFSVS
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mRNA from alignment at Ecto-sp13_S_contig12909:2..4276-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12909.2394.1 ID=mRNA_Ecto-sp13_S_contig12909.2394.1|Name=mRNA_Ecto-sp13_S_contig12909.2394.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4275bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12909:2..4276- (Ectocarpus species13 EcNAP12_S_4_19m)
AGATCTTTCTACGAGAAGCTACGGGCTGGCCAAGAAGATGAGCTAGACGG
CGCGGAGCTAGCGGAGGACATCGAGGAGGACAACGGGCCCAAGGCCCTGA
CCATCATGCAGCTCGCCAGGGTTCTCAAGCCCTACTTCTGGCCCAAGTGA
GACAAAATAATAAAGTAATAGCTACCGCAGCCGTCGGTTATATATTACAC
AAGATAATACCCCCTCACAACGCAAGTACCACACCTGGTGGGAATATTGA
TGCGGGTCAACATGAGAACGAAACGGAACCACCGTCAGCACACAAGGGTA
CGCAAGATACCACACAACCAGCACGCCCGGTTGATCATGTTTGGAGAGGA
CGACTGTTGGATACAACGGGGGGAGACCTTTGTGTGGGCAGAAGCTTAAA
GTGAGCTTGGTTGACGGACCGGAGGAAGTATACGGCAGGTATGCTGTTGG
TGTTTGCTCTCCCGCCTTCCATCACCCGGTGGACTGAAAAGTCGTCTTCT
CTCTCGGCACCGCTCAGACAGGTGCTCAGGGGCATCGGCAGCACATCGGG
GGCCGTTTGCAGTTCCGGCTAAAAACCGTAGATTGCGTAAGATATCACAC
ACCCTGGATCGATTTTCGACGCTCGATTTCAAATCAGGAAAAGCGGTGAC
AGTGCCGAAAATGGCAGCGTTGAGATCGTCTCGTCGAGAGCTCTCCGAAA
ACACATCCTTTCATATCGGCATCCTTTTCTTCGTGGAGTAATGGAGTTTT
TTTCGAAATCGGTCCAGGGGTGTGTGGTTCGGTTTTTAGCGGACCACGGT
AGTGCCGGTTCGTTCGGCTGCTCGTGGTACCATCCCTGTTATCCGGTCTG
TACCTTGCTATGTTTCAGCTTCTGTACCTTTCGATTTTCGCGCCCTGCCC
TCCCGTGGTTGTTTGTCTTGTGTCTCTCTCATCAGGGGCGGGACGCCGAA
CGCGCTCATGAACCGGACGCGCAGCTCGATGACGTGGGTGTTCGTCATCG
TCTCCAAGGTGTAACAATGGAAAAAATAAGAAAGTGAAGAAACTAGAACT
TAAGAATTGAGTGACAGGACCAAGATTGATGGAACAAAAAATGGCAAGGA
GAAAGTTACCAAGAACAATACGAGAAGGATCGAATTCAAGAGCAAGAACA
GAAGTGAGCGGAAAATGCCAAATGCTGACAATGGACAATCCACGAAAGAG
AATGGAATCTAATCCTAGGAACGACAAGAAATGAACGAAACATACGTGTA
CAGGCCGGCGGCCACTCTCAACATTCAGGAGAAATCGTGATGTACATGTT
TCAAGATAAAGTACATGCAATCACCGGACGACTACACGTTTGAAGTACGA
CCACTGTAGTCGAAGGATATGTTTTGAAAGTCTTTGCAGTGAGTGCCAGG
AAAACCGGCTGGATACTAAAGCGTATTTTCAGCCTTTGTAAACCTAGCAC
TTCGTTACTATCTCTCGTTTCAGGCGCAAACTCCCCCCCCCCCCCCCCCC
TTGTTTCCCCCCTTTACACTCACAAAAGTTTTCCCACGGAAGGACCCCGT
TTTTCTTACGAAAGACACCAAAATTCNNNNNNNNNNCCGGATTATAAACC
CTTTTTTTACCCTTTTAAAACAAAACACTTCTTTTCTATCCTTCCTTTCA
GCCCCAAACCCCCCCCCCCCCCCCCCGCCTTGTTCTCCTCGTATACACTG
CAAAAGGTTTGCAGCGTGACGAGCCCGTTCTTCCTGAGTAACGCAACTAA
CTCTCTCTACCACGGCGACCTCGGCGAGACCATGAAGTACGTTGGTCTCT
ACGCCATCCTGGCGTTATCCGCTAAAGCTCTCAAGGAGGCTCAGAGCCTT
GTTTATCTCAAGTGAGTTCGGGCACCACAGAAATGAGGGCGGGGGGGGGT
TGCTTTCCCAGCAGACGATGGAAGGGGTGTGAGATTCGGAGTTGCAACAG
TGCGCGGGCGCAGGTATTTTCCACAATGGCTGCAATATGTGAACGGGAAT
AGGCGGTGAGAGAAGAGACTGGGAGGCGATGGAAGCGGAAGGGAGGGAAG
GCCCCTGGGAGATAGGGAAAGGGAGAAAGAGAAAGATAGAGGGAGAGACA
GAGCGACGGGGAGAGGGGGGGGGGGGGGGGAGAGAGAAAGAGAGGGAGAC
AGACAGGGAGAGGGAGTATACTGCCCATTCTTCGCTTCAAGAACACCGCA
CTGGGTTCTCGTCGATGCCTCCGCACCCAAAATTACCCACCCCTCAACGA
CGTCCTCCTGCTGTCGAACAGGGTGAAGCAGCAGGCCTACATCGAGATCG
CGGAGCAGTCGTTCGCCCACCTCCACACCCTATCCTTGCAGTGGCACCTC
AAAAAGAAGATGGGTAACGTGGTGAGGTCGATGGACAGGGGCACGGACGC
GGCTAACAATCTCATCACCTACCTCTTCCTGTACCTTGTCCCGGCCATCG
CGGAGTGCATAGCCACGGTGAGGGAGGACAGGTGTTTCGGTTTGGTGATG
GCGGTGGTGGTGATGTTGTTGTTGGATGTTGTTGCTGCTCCTGACGTTGG
GTGGGAGTGTTGTTTTAATTGCTGTGTTATTGGGTGGGGATGATATTCGC
GGTGGCTGTGGTCGTGGTCTGACTACTGGAGAGATGTTGGTGATGCTCTC
GATGGTGCCGCGATGTTGCTGAGTTGGTCGTGGTGATGTTGTTGTTGTTG
GTAAATACTAGTTGGTAGTGTAGGTGACCGCGGTCTTATTGGTGCTGTCG
TTGGACGTTAGCAGCACGCGCCTTTACTGACTGTGAACCTCTTGTTTTGC
CCCCGAGGACCTTTGTTTTTTTCCCTCTTGTTGGGTATCATCCCAACATC
AACCATGAATACATAAGACTTGATATATTCTTCTTGGATTCCAAACCGAG
AACCTTCTTACGGTCAGGTCCACAAGTCACCTCTTTTATTGGGCCTGAAT
CTGTCCACGTCCAGGCTACTCAAGGTAGTGACGCGTATTGCATAAACATC
CTGCTTCGGCTTGACCCGTGCTTGTACATTTTTTTCGTTACTCAATCCCT
GCTGTTGGTCTGTTTTGGTGGTAATTCGTGCGTGCTGCATTCTGCAACGC
AACAGGTGATCGTGTTCTACGTGAACTTCGACGACTGGAGGCTGGCTACG
ATGGCCTTCTTATCCCTCACCCTGTACGGCTACGTGACCGTGAGGGTGAC
GCTGTGGAGGAAGAAGTTCCGCCAGGCCACCAACAAGCACGACAACGACT
ACCACGACAAGGCGACGGATAGGTGGGCGAACGAAAGGGGTGTGAGCAAC
ACCAGGGTTGATGGGGTATAAAACTTTGCGTTCACGGTCGTGTTGGTATT
ATAGTTGGGCATGACGACGACCATGGCGAAGGGGTACGCGAACGGAAGGG
GTGTGGGGTGAGCACCACACCAGGGGTGGTGGGGTATAACACTATGCGTT
TACGGTATGTTGGTAGTTGGGCATGACGATGACTGTCGCGAAGAGGTACG
TGAATAGAAGGGGTGTGAACGCCTTGGAAGGCGTGATGGGGGCATTACTA
CGCGTTCACCGTTATGTTGGTAGTCGAGCAAGGCGACGAATACCGCGAAG
AGGGTGTGAACACCTTGCCTTGCGAAAGGGGCGATGGGGTATTGTATGCG
TTGACCGTTGTGTTCGTAGTTGGACCACGGTAAGGCTACGGACAGGTGGG
TGAACGCAACGCCTCTGACCACACCACGGGGCTATGCGCGGGGTCTTGCA
TGCGGTCACCGTACGCTATGGTTGTAGATTTGAGCATGGCAACTAGTGTG
GTACAGTCCGCGACGAAGGCCTTGCGCGCATTTTACGACGTTCACCGTGC
GTGCGAGGGGTTCGGAAGCACATTTCTCGCGTCGAAAAATGAACGGCTGT
TTCGAACCCTGGATTTATTTAACCGCGCCTACCCTCGAGCCATGCTTCTT
TTTTTGCGTCTTGTTGTTTCTGGTATCCCGTCGCCGTTGCAGCATCGACT
ACGAAATAGTCAAGTCCTTCACTATACTGTTTCTAAGCCTGAGTTGTCTC
AAGTGCTATGCCCTCGTGCGGCAGTTGATTTTTCCTCTCGTCTTTTCCTT
CCCATGTTGTTTTCAGCATCGTAAAACCATGGTACGTTTAACTCGTTTCG
TCCTTTCCCGTGTTATTGCTTGCAGCATCATAAACTACGAGACCGTGAAG
TATTTCACGAACGAGAACTTCGAGGTGGCTCGCGTCAAGGAGAGCGTGAA
GGAGTACCAGCGCTTCAGCGTCAGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12909:2..4276-

>mRNA_Ecto-sp13_S_contig12909.2394.1 ID=mRNA_Ecto-sp13_S_contig12909.2394.1|Name=mRNA_Ecto-sp13_S_contig12909.2394.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12909:2..4276- (Ectocarpus species13 EcNAP12_S_4_19m)
AGATCTTTCTACGAGAAGCTACGGGCTGGCCAAGAAGATGAGCTAGACGG
CGCGGAGCTAGCGGAGGACATCGAGGAGGACAACGGGCCCAAGGCCCTGA
CCATCATGCAGCTCGCCAGGGTTCTCAAGCCCTACTTCTGGCCCAAGGGC
GGGACGCCGAACGCGCTCATGAACCGGACGCGCAGCTCGATGACGTGGGT
GTTCGTCATCGTCTCCAAGGTTTGCAGCGTGACGAGCCCGTTCTTCCTGA
GTAACGCAACTAACTCTCTCTACCACGGCGACCTCGGCGAGACCATGAAG
TACGTTGGTCTCTACGCCATCCTGGCGTTATCCGCTAAAGCTCTCAAGGA
GGCTCAGAGCCTTGTTTATCTCAAGGTGAAGCAGCAGGCCTACATCGAGA
TCGCGGAGCAGTCGTTCGCCCACCTCCACACCCTATCCTTGCAGTGGCAC
CTCAAAAAGAAGATGGGTAACGTGGTGAGGTCGATGGACAGGGGCACGGA
CGCGGCTAACAATCTCATCACCTACCTCTTCCTGTACCTTGTCCCGGCCA
TCGCGGAGTGCATAGCCACGGTGATCGTGTTCTACGTGAACTTCGACGAC
TGGAGGCTGGCTACGATGGCCTTCTTATCCCTCACCCTGTACGGCTACGT
GACCGTGAGGGTGACGCTGTGGAGGAAGAAGTTCCGCCAGGCCACCAACA
AGCACGACAACGACTACCACGACAAGGCGACGGATAGCATCATAAACTAC
GAGACCGTGAAGTATTTCACGAACGAGAACTTCGAGGTGGCTCGCGTCAA
GGAGAGCGTGAAGGAGTACCAGCGCTTCAGCGTCAGC
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