mRNA_Ecto-sp13_S_contig129.2384.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig129.2384.1
Unique NamemRNA_Ecto-sp13_S_contig129.2384.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig129.2384.1 vs. uniprot
Match: D7FNH2_ECTSI (Putative: flagellar/basal body protein, PACRG (Parkin co-regulated gene)-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH2_ECTSI)

HSP 1 Score: 634 bits (1635), Expect = 1.360e-223
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 2
Query:  131 MTARTINGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEESPPGGAAKGGQSKRASARAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1096
            MTARTINGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEESPPGGAAKGGQSKRASARAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS
Sbjct:    1 MTARTINGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEESPPGGAAKGGQSKRASARAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 322          
BLAST of mRNA_Ecto-sp13_S_contig129.2384.1 vs. uniprot
Match: A0A6S9L0N5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9L0N5_HETAK)

HSP 1 Score: 457 bits (1177), Expect = 1.780e-154
Identity = 238/318 (74.84%), Postives = 263/318 (82.70%), Query Frame = 2
Query:  146 INGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTV-IPFGSGEESPPGGAAKGGQSKRASARAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1096
            +N S+KI  +++  K TGSPFD+T + + + RPGGHD LP K IDV AFS SK+T   +P +F+K+GTG GGT+ IP    +E P                A   +K K+ DFQAFA+R NPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRE+E PYAFLAEQGVYDM+SAGSNKVLPVIPQLIIPIKTALNTRQK VIVKVLKVLQ+LV CD GPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRE LGELI ETLE FE++GGEDAFINIKYLVPV+QSVVVS
Sbjct:    7 MNDSLKIANRNQGPKITGSPFDSTIVGAYRERPGGHDILPTKAIDVGAFSISKKTNRPTPQNFVKKGTGTGGTLTIP--QKDEKPS---------------AHVQRKKKIEDFQAFAQRANPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLREVEEPYAFLAEQGVYDMMSAGSNKVLPVIPQLIIPIKTALNTRQKRVIVKVLKVLQALVQCDTGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRETLGELINETLEQFEIHGGEDAFINIKYLVPVYQSVVVS 307          
BLAST of mRNA_Ecto-sp13_S_contig129.2384.1 vs. uniprot
Match: A0A7S2UTZ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTZ0_9STRA)

HSP 1 Score: 451 bits (1161), Expect = 4.790e-152
Identity = 235/313 (75.08%), Postives = 259/313 (82.75%), Query Frame = 2
Query:  158 IKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEESPPGGAAKGGQSKRASARAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1096
            I+I +++   K TGSPFD+T I + K RPGGH+ +  + +DV AF+ +K TA  +P  FLK+GTG GGT+             A KGG  ++  A     KK K RDF AFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRE E PYAFLAEQGVYDM+SAGSNKVLPVIPQLIIPIKTALNTRQK VIVKVLKVLQ+LV CD GP+GQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRE LGELIMETLE FEV+GG+DAFINIKYLVPV+QSVVV+
Sbjct:   13 IRISDRNHGSKHTGSPFDSTLIANYKDRPGGHEIIKPRNVDVGAFAVTKTTAKPTPDRFLKKGTGLGGTLT------------APKGGPQEQTKA-----KKDKCRDFGAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRETEDPYAFLAEQGVYDMMSAGSNKVLPVIPQLIIPIKTALNTRQKKVIVKVLKVLQALVQCDTGPEGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRETLGELIMETLEQFEVHGGDDAFINIKYLVPVYQSVVVT 308          
BLAST of mRNA_Ecto-sp13_S_contig129.2384.1 vs. uniprot
Match: A0A836CE89_9STRA (Putative flagellar/basal body protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE89_9STRA)

HSP 1 Score: 447 bits (1149), Expect = 1.940e-150
Identity = 232/317 (73.19%), Postives = 255/317 (80.44%), Query Frame = 2
Query:  146 INGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEESPPGGAAKGGQSKRASARAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1096
            ++GS+K+  + +  K TGSPFD T   S+  R GGH+ L  + IDV+AFS+SK+    SP  FLKRGTG GG + P                      A    VKK+K +DFQAF+ERPNPPNT+ RRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRE+EMPYAFLAEQGVYDMLSAGS KVLPVIPQLIIPIKTALNTR K VIVKVLKVLQ+LV CDQG DGQ LIGQALVPYYRQILP+LNIFIR NDNLGD IDYGQQRRENLGELI+ETLEAFEVNGGEDAFINIKYLVPV+QSVVV+
Sbjct:    1 MSGSLKLGTQKETIKHTGSPFDTTTA-SLTKRAGGHEGLAPRAIDVAAFSHSKQVEKPSPKKFLKRGTGIGGMLAPV---------------------ATTTVVKKSKPKDFQAFSERPNPPNTQLRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLREMEMPYAFLAEQGVYDMLSAGSAKVLPVIPQLIIPIKTALNTRIKGVIVKVLKVLQALVACDQGTDGQALIGQALVPYYRQILPILNIFIRNNDNLGDTIDYGQQRRENLGELIVETLEAFEVNGGEDAFINIKYLVPVYQSVVVT 295          
BLAST of mRNA_Ecto-sp13_S_contig129.2384.1 vs. uniprot
Match: A0A8J2WZN8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZN8_9STRA)

HSP 1 Score: 429 bits (1104), Expect = 1.750e-143
Identity = 219/322 (68.01%), Postives = 250/322 (77.64%), Query Frame = 2
Query:  131 MTARTINGSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEESPPGGAAKGGQSKRASARAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1096
            M A      +++R++   F ETGS FD+T   +I +R GGH++LP + ++  AF  S+RT  + P  FLK+GTG GGT       EE                 +     K+KL DFQAFAERPNPPNTEFRRFYERGDLPVQ+DHGGV NR+AWKVD+QKLDFHHYLPIFFDGLRE+E PYAFLAEQGVYDM+S+G  KVLPV+PQLIIPIKTALNTR K VIVKVLKVLQ+LV CD  P+GQ LIGQALVPYYRQILPVLNIF+R NDNLGDGIDYGQQRRENLGELI ETLE FEV+GGEDAFINIKYLVPV+QSVVV+
Sbjct:    1 MPATIDKNDLRVRQRQVHFAETGSCFDSTNFEAITVRAGGHESLPRRRVNAEAFGNSRRTRRELPSDFLKKGTGTGGTDARPAPAEE----------------VKKRQAPKSKLMDFQAFAERPNPPNTEFRRFYERGDLPVQVDHGGVSNRVAWKVDVQKLDFHHYLPIFFDGLREVEQPYAFLAEQGVYDMMSSGWQKVLPVVPQLIIPIKTALNTRSKPVIVKVLKVLQALVACDCVPEGQHLIGQALVPYYRQILPVLNIFVRSNDNLGDGIDYGQQRRENLGELIAETLEHFEVHGGEDAFINIKYLVPVYQSVVVA 306          
BLAST of mRNA_Ecto-sp13_S_contig129.2384.1 vs. uniprot
Match: A0A7S2KYM2_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYM2_9STRA)

HSP 1 Score: 408 bits (1048), Expect = 5.460e-135
Identity = 216/320 (67.50%), Postives = 247/320 (77.19%), Query Frame = 2
Query:  158 IKIREKHKIFKETGSPFDATPI-HSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGT------VIPFGSGEESPPGGAAKGGQSKRASARAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1096
            IK+REK   F ETGS FDAT + H  K+R GGH+ LP K +D +AF + K+TA ++P  F ++GTG GGT      V+P     E P                    KK K  +F AFA RPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKV I KLD+HHYLPIFFDGLRE+E PYAFLAEQGVYDM+  GS+KVLPVIPQLIIPIKTALNTRQ+ VI+KVLKVLQ+LV CDQ  + Q L+GQALVPYYRQILPVLNIFIRQN+NLGDGIDYGQ+ R +LGELIMETLE FE+NGGEDAFINIKYLVPV+QS +++
Sbjct:    9 IKMREKLPSFAETGSCFDATKLGHLSKVRAGGHEALPIKYVDENAFCFVKKTARRTPQEFTRKGTGTGGTLRIPKPVVPSTMPIEPP----------------VLKEKKKKAINFSAFAARPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVAIDKLDYHHYLPIFFDGLREIEEPYAFLAEQGVYDMMQMGSSKVLPVIPQLIIPIKTALNTRQRIVIIKVLKVLQALVKCDQ--NEQNLVGQALVPYYRQILPVLNIFIRQNENLGDGIDYGQKTRGSLGELIMETLEEFEMNGGEDAFINIKYLVPVYQSSILT 310          
BLAST of mRNA_Ecto-sp13_S_contig129.2384.1 vs. uniprot
Match: K0SM83_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SM83_THAOC)

HSP 1 Score: 390 bits (1003), Expect = 5.550e-128
Identity = 211/330 (63.94%), Postives = 243/330 (73.64%), Query Frame = 2
Query:  158 IKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEESP--PGGAAKGGQSKRASA---RAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQG------------VYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1096
            +  R K   F ETGS FDAT  H I ++PGGHD LP   +DVSAFS+S++   +SP  F++RGTG GGT+ P    E  P  P         +R S    R    KKT      AF ERPNPPNTEFRRFYERGDLPVQI+HGG HNRIAWKV I+KLDFHHYLPIFFDGLRE+EMPYAFLAEQG            VYDM+  GSNKV PV+PQLIIPIKTALNTR ++VI KVLKVLQ+LV CD+G +   L+GQALVPYYRQILPVLNIFIR+NDNLGDGIDYGQ+ R NLG LIME LEAFEV GG+DA+INIKY VP+++S ++S
Sbjct:    3 LSTRRKTPTFVETGSCFDATNAHHITVQPGGHDALPKNELDVSAFSFSRKIERRSPKQFMRRGTGTGGTLRPPTKDETPPDFPDENVTPSPGRRLSTDRIRNPKQKKT------AFMERPNPPNTEFRRFYERGDLPVQIEHGGCHNRIAWKVAIEKLDFHHYLPIFFDGLREVEMPYAFLAEQGKFPSLRVFLRKGVYDMMQIGSNKVAPVVPQLIIPIKTALNTRDQSVIAKVLKVLQALVKCDKGKN---LVGQALVPYYRQILPVLNIFIRKNDNLGDGIDYGQRHRGNLGGLIMECLEAFEVAGGQDAYINIKYFVPIYESSILS 323          
BLAST of mRNA_Ecto-sp13_S_contig129.2384.1 vs. uniprot
Match: F0Y9M8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9M8_AURAN)

HSP 1 Score: 366 bits (940), Expect = 4.780e-120
Identity = 187/218 (85.78%), Postives = 197/218 (90.37%), Query Frame = 2
Query:  431 RASARAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQS 1084
            RAS RAA V+        AFAERPNPPNTEFRRFYERGDLPVQIDHGGV NRIAWKVDIQKLDFHHYLPIFFDGLRE+E PYAFLAEQGVYDM+S+G  KVLPVIPQLIIPIKTALNTR+K VIVKVLKVLQ+LV CD  P+GQ LIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLE FE++GGEDAFINIKYLVP +QS
Sbjct:   11 RASMRAARVRDPPAAT--AFAERPNPPNTEFRRFYERGDLPVQIDHGGVTNRIAWKVDIQKLDFHHYLPIFFDGLREVEQPYAFLAEQGVYDMMSSGWQKVLPVIPQLIIPIKTALNTRKKEVIVKVLKVLQALVMCDTVPEGQHLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEYFEIHGGEDAFINIKYLVPTYQS 226          
BLAST of mRNA_Ecto-sp13_S_contig129.2384.1 vs. uniprot
Match: A0A7S4D719_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D719_HETAK)

HSP 1 Score: 358 bits (919), Expect = 3.980e-117
Identity = 177/190 (93.16%), Postives = 183/190 (96.32%), Query Frame = 2
Query:  527 RFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVVVS 1096
            RFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRE+E PYAFLAEQGVYDM+SAGSNKVLPVIPQLIIPIKTALNTRQK VIVKVLKVLQ+LV CD GPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRE LGELI ETLE FE++GGEDAFINIKYLVPV+QSVVVS
Sbjct:   22 RFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLREVEEPYAFLAEQGVYDMMSAGSNKVLPVIPQLIIPIKTALNTRQKRVIVKVLKVLQALVQCDTGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRETLGELINETLEQFEIHGGEDAFINIKYLVPVYQSVVVS 211          
BLAST of mRNA_Ecto-sp13_S_contig129.2384.1 vs. uniprot
Match: A0A7S2AT99_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AT99_9STRA)

HSP 1 Score: 355 bits (912), Expect = 1.730e-114
Identity = 191/312 (61.22%), Postives = 225/312 (72.12%), Query Frame = 2
Query:  158 IKIREKHKI-FKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYSKRTAHQSPLSFLKRGTGNGGTVIPFGSGEESPPGGAAKGGQSKRASARAAAVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKVDIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQLIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFINIKYLVPVFQSVV 1090
            +KI  K  + ++ETGS FD+T +  IK RPG  +      +DVSAFS S+RT  ++  SF K+GTG+GGT+I        P  G AK               K      +A + R NPPNTEFRRFYERGDLPVQIDHGGV N++ WKVDI+KLDFHHYLPIF++GLRE+E PY F+A QGVYDML  G NKVLPVIPQLIIP+KTALNTR K VI KVLKVLQ  V CDQ  + QGLIGQA VPYYRQILPVLN++ R  DN GDGIDY Q+ ++NLGELI ETLE FE+ GG+DAFINIKYL+P +QSVV
Sbjct:   25 VKIVRKSALKWRETGSVFDSTNVGVIKARPGVDECAAMPDVDVSAFSMSRRTTRKTADSFTKKGTGSGGTLI-------KPKNGPAK---------------KPLTFSKKATSRRSNPPNTEFRRFYERGDLPVQIDHGGVENKLQWKVDIKKLDFHHYLPIFYEGLREVEEPYNFIARQGVYDMLHFGYNKVLPVIPQLIIPLKTALNTRDKEVIQKVLKVLQETVKCDQRGNEQGLIGQAFVPYYRQILPVLNLYCRAIDNQGDGIDYSQRFQKNLGELIGETLEIFEIYGGDDAFINIKYLIPTYQSVV 314          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig129.2384.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNH2_ECTSI1.360e-223100.00Putative: flagellar/basal body protein, PACRG (Par... [more]
A0A6S9L0N5_HETAK1.780e-15474.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UTZ0_9STRA4.790e-15275.08Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CE89_9STRA1.940e-15073.19Putative flagellar/basal body protein n=1 Tax=Trib... [more]
A0A8J2WZN8_9STRA1.750e-14368.01Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2KYM2_9STRA5.460e-13567.50Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
K0SM83_THAOC5.550e-12863.94Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
F0Y9M8_AURAN4.780e-12085.78Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S4D719_HETAK3.980e-11793.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2AT99_9STRA1.730e-11461.22Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig129contigEcto-sp13_S_contig129:14903..19752 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score636.7
Seed ortholog evalue6.6e-180
Seed eggNOG ortholog2880.D7FNH2
Preferred namePACRG
Model size2055
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.negative regulation of cell death
EggNOG OGsKOG3961@1,KOG3961@2759
Cds size1098
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig129.2384.1prot_Ecto-sp13_S_contig129.2384.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig129 15859..19751 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462690.0321608-UTR-Ecto-sp13_S_contig129:14902..158581681462690.0321608-UTR-Ecto-sp13_S_contig129:14902..15858Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig129 14903..15858 -
1681462690.0897934-UTR-Ecto-sp13_S_contig129:19751..197521681462690.0897934-UTR-Ecto-sp13_S_contig129:19751..19752Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig129 19752..19752 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462690.0419-CDS-Ecto-sp13_S_contig129:15858..160191681462690.0419-CDS-Ecto-sp13_S_contig129:15858..16019Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig129 15859..16019 -
1681462690.0499048-CDS-Ecto-sp13_S_contig129:16569..167371681462690.0499048-CDS-Ecto-sp13_S_contig129:16569..16737Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig129 16570..16737 -
1681462690.05785-CDS-Ecto-sp13_S_contig129:17156..173131681462690.05785-CDS-Ecto-sp13_S_contig129:17156..17313Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig129 17157..17313 -
1681462690.0658453-CDS-Ecto-sp13_S_contig129:17916..180451681462690.0658453-CDS-Ecto-sp13_S_contig129:17916..18045Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig129 17917..18045 -
1681462690.0738204-CDS-Ecto-sp13_S_contig129:18339..185881681462690.0738204-CDS-Ecto-sp13_S_contig129:18339..18588Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig129 18340..18588 -
1681462690.0817807-CDS-Ecto-sp13_S_contig129:19517..197511681462690.0817807-CDS-Ecto-sp13_S_contig129:19517..19751Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig129 19518..19751 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig129.2384.1

>prot_Ecto-sp13_S_contig129.2384.1 ID=prot_Ecto-sp13_S_contig129.2384.1|Name=mRNA_Ecto-sp13_S_contig129.2384.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=366bp
MLPFNLSVHLSTTGRVGTGVTYSQAVCVGVVWLLPSARDKGTVMTARTIN
GSIKIREKHKIFKETGSPFDATPIHSIKLRPGGHDTLPAKPIDVSAFSYS
KRTAHQSPLSFLKRGTGNGGTVIPFGSGEESPPGGAAKGGQSKRASARAA
AVKKTKLRDFQAFAERPNPPNTEFRRFYERGDLPVQIDHGGVHNRIAWKV
DIQKLDFHHYLPIFFDGLRELEMPYAFLAEQGVYDMLSAGSNKVLPVIPQ
LIIPIKTALNTRQKAVIVKVLKVLQSLVTCDQGPDGQGLIGQALVPYYRQ
ILPVLNIFIRQNDNLGDGIDYGQQRRENLGELIMETLEAFEVNGGEDAFI
NIKYLVPVFQSVVVS*
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mRNA from alignment at Ecto-sp13_S_contig129:14903..19752-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig129.2384.1 ID=mRNA_Ecto-sp13_S_contig129.2384.1|Name=mRNA_Ecto-sp13_S_contig129.2384.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4850bp|location=Sequence derived from alignment at Ecto-sp13_S_contig129:14903..19752- (Ectocarpus species13 EcNAP12_S_4_19m)
GATGCTACCTTTTAACCTCTCTGTACACCTTTCCACTACGGGACGCGTGG GCACAGGTGTGACATACTCACAAGCAGTTTGCGTAGGTGTAGTGTGGCTT CTTCCCAGCGCAAGGGATAAGGGGACAGTGATGACGGCGAGGACGATCAA TGGGTCGATCAAAATCAGGGAGAAACACAAGATTTTCAAGGAGACTGGCT CCCCGTTCGATGCGACACCGATTCACTCCATCAAGGTGTGCTGTGTATGC TTCCGGGGGAACTTGTAGTGATGCCCCTGGTGGTACTACTAGCCCCCGAC CCGCTGTGCGAGCTCTTTGGTAGTGAACGATGATATTTGGTCAAAAGTAT CTGAATTCCTTCCACACACGGGCGGACGTGGTCGCTATCCTGTCGTGGGT TGGTTCTTTCTCCGCGTGGTGCGCCGGTGTATACACCCAACCAGAGCCCC CTCGATTATGGCTACCATCGTCTGACGGCACGATGGGTGGTGGTACAACA AAGCGATCGCACGAGTGCATGAATGAAGGTATCGTAGGGTGATACGAGCG AGACGAACGGGTCTTGCCTGCCGGCACGGGCACATCTATCTACACGCAAG TAGACGCCCGTGTAAGAAAGCATTCAATATTCGGGAAGGGTTCAGGCTCA AGTTCAACAGCTAAGCAGTAGAGCAAACCCATGCAAACCGCTGATACAAC AGTCTATTGTGACACGGCGTTTTTTCGCACACGTTTACTTCTTACCTAAA CATAGCCCCTTCGTAACTTTCCGACGACGACGGTGGACCCAACATAGTCC AGGCGATTTTCTGCCTTTTGTCTCCATCGCTCCGCTACTACTGTAGACTG TACAAAACGTAAACTAGAGGGGTGGTCCTCGATGATCGAATCTTCGCTTA TAAGGCAGTACTGTAGTTTCCCACCCATCATGTTTGGTTGTTTTTTTTCC GTACCTTTTCTTCGGGGTACAAAGCTTGTGGCCACGAAAGCCGTCCGCGT CAGCTGAATCATCAGCAAGGACTTAAGAAGTACGAGGATATATATCGGAA CCGTTTTTAGTGGCAGACAACAACAAGGACAATACCCATCTACAAGTGTT TGACATGTATGTGCCATACACCCGTATCGCCTCTTTTTATCGCTCTGGGA TATATCTCGGCCAGCTCCGGCCAGGCGGGCATGATACTCTCCCGGCAAAG CCCATCGATGTGTCGGCATTTTCATACTCGAAGAGAACGGCGCACCAAAG CCCTCTGTCGTTTCTAAAGCGGGGGACGGGGAACGGCGGGACCGTGATCC CTTTCGGTTCTGGCGAAGAATCCCCCCCCGGCGGCGCAGCGAAAGGGGGG CAAAGCAAACGGGCGTCGGCTAGAGCAGCAGCCGTAAAAAAGACCAAGCT GCGGGACTTCCAGGTACAATGGTGTTCACCTTGTTTATGGTGAAAGTGGA GTAGAGATGGCCAAATTCGCTGTGCAGACCTGCGCCATACTACACTGTAA CGACAAACATAAGTTCATCCATTTGCCGGTCGACGGTCAGCAGACTCGCC TTGCGCTTGTTCATCGGGAACAACTTCAACGACCGGTGAGTGGATAGTAT TGTCTCCAGTTCGGAGCTGTTGCCCGGCGGATGCAAACAAAACACATTGG TTGATGTCGTGTCGCCGCTGCTGTTGTTCTTGTTGTCACCCAAAAAACAA CAAACAGGCGTTTGCCGAGCGTCCGAACCCTCCGAACACGGAGTTCCGGA GATTCTACGAGCGCGGAGACTTGCCCGTGCAGATTGACCACGGAGGAGTA CACAACAGGATCGCATGGAAGGTCGACATCCAGAAGGTAGGGGTCATATA TTGTGTGTGATCTGTACACGGCGCTTTTTCCTAGCAGATACTCCGCCGGA GTGCTGTGGACAGTACCTTCAGCTTCACAAAATTGTTTGGCTTGGGAACT AGTTGAAGCCGGGAGGTGGAGATTTTGGCTGGGCCGCACTTACGACCAGC GCCCTTCTTTTCCGCGTGCGGCCGAAGTACACGAGAAACCACTCTAACAC TGGATTGATTGACGTCGATCGACCGGGAACTGTCCCTATCTCTCGACCCA CGTAGGGATTCTGCCGACCGAATTCAACACGGTACTGACCGAGGAGCCCA GGCTCAACAAATCCAAGCCTCGCACACGTAATAGACTCCTCAATCGACGC GTCGCTCCTTGAATTGCGCTTGTTCTCATAATACCATGCATGCTCAGTGA AGAGCAACAACAGAATCTGTACGCTCGATGTCTAGATCAACTATTCAGGT AGCAAACATGACGCACGATTTTTCATCGTGTTGGCCTCGTCCTGTACACC TTTTGTATACGTGTGATTGCCGTGCGAACCACGTCGAAGTAACCACAAGT GCACCGCTCTTTTTCTTCCTGCTCTGTTCTGGGCTGCAGCTGGATTTCCA CCACTACCTACCGATTTTCTTTGATGGGCTGCGCGAGTTGGAGATGCCCT ACGCGTTTCTCGCGGAGCAGGGCGTGTACGACATGCTCAGCGCCGGGTCC AACAAAGTCCTCCCTGTCATCCCGCAGCTCATCATCCCCATCAAGAGTGA GCAACACAGGAAAAAACTGATTTTGCTGATAGAATAGCCTCACCCATCGT GTGCGCAGCCGTTTCGTTGTGTGAAGACAAGCCGTTGGTTTCAGGCAGAG GTCGCTCCGTCCTTCGAGCCTCACTTGAATCAACAACATTCGCGGCACAC AGCATGAGACAGCAGTTCTCGCCTTTGGCCTCGTTGCCATCCAACAAACG CCCGAAGAAATGTCCAGGCAATCTTTGCTCTCCAGGCAGCCAGATGGTGT TGCTTGTTTGGGCGACAACATAATAACCAATCGCAGTCTTAACCGTGTCG GCCCAAACCATGACATTGATATCTTGCTCCAAGCCACCTTGCGCATGCGT GCGTACGTACGTAATCTTGTTGTGGTTTTTGGATGTGTATGTCGTCGGTG GCATGCTGCATACAGCCGCGCTCAACACGAGACAGAAGGCGGTGATCGTC AAGGTCCTCAAGGTGTTGCAGTCGCTCGTCACGTGCGACCAGGGCCCCGA CGGGCAGGGACTCATCGGGCAGGCGCTTGTGCCCTACTACCGTCAGATCC TGCCAGTGCTCAACATCTTCATCCGGCAAAACGGTGCGGTATACTACGGG TACCAGTGTATATAGTACTAGACAAGCAAGTTGTGTTTGGGTGTTTGGGT GTTTGGGTGTGTCACGGTGTCTCGTGGCGTTGCGGAATCTTCATGTTTCG AGGCTTGCAAACTGGTACTTTAGCAGTAGCATGGTGCATGAAGATAGTGG TGTTGTTGTGGATAAAGCTTAAGTAATGCGGGAGGTGGCTTTGTTCGTAT CTTTATATCCTAGTTTGCCCTGTATCCTTCGTTTCCTTCAAAGTCTCAAT TCCATACCATGTGTGACGAAGTTTGGACCAACGACGTTGTTGCGGCGTCT GAATGCGGCAAATCGGTAGGAGCCCACCTGGGAGATGCCCACACTTTCCC GTCGAACAAGATCGCCTGTTTTTCCTCGTCTAGAGGAAAGAAAAAACAGA CGCACCTCGTAAGGTGCAAGTATCCCGTCGACCTTACCGCATACGGCGAA CAATGCGACAACAAAACCAACCAACGTTTGGTGCGGCGTCTTCGCCTCTC CCTTATTACAATCTACCGCTTCCCGTCGTCCAGACAACCTCGGAGATGGC ATCGACTACGGCCAGCAGAGGCGGGAAAACCTCGGCGAGCTCATCATGGA AACCCTGGAGGCGTTCGAGGTGAATGGCGGCGAGGACGCCTTCATCAACA TCAAGTACCTCGTGCCTGTGTTTCAGAGCGTTGTCGTCAGCTAAAAAAGA TGACAGCAGCAATTTGGTGGCGTCAATAAGCACGTGCTGTTTGTTTCTCG CGTGGTAGCTGGCGTAAGGGGCATCCGCACTTGCGAACGCGATGGAAGGC TACATTGCAGTGCAAACGTAGACTGACACTGCAATGCGTGCGTGCGTGCG TCGGAAATTACGTCGTCCAGGAGCGTATGCTCTGTCGTACTAGACAACGG ACCCCCCACATAGTAAGATAGATGGTATGTACCGTACGCTCATGGCAGAG GGAAATATCAACCTTTCTCTGGCGAGGGAACGGATCGTGCGGTTGGTTGT GGCTAAAAGAAATCAAACTACCGCGGAAAGAGGCACGATGAAGGGTAGGG GATCTCTCTTGAAAGGAAGCAGGTACTTGGACGCGTTTTGGTGATACAAG TCGTGCACTCTGGTGGATGCCATTTCTTGTCAGAGCAGCGACTTCTCCAC ATGGCAGGTTCATCGTTCCCGTGCCTGAACTACTCACGCCCAGACGACTG TTGACGCGCGTGCATGCAACGAGCGAACGCTGTCAGAAAGAAAGGAAACT GCCTTGGCAAAGTCTCGTCGCTTTTTCTATTTTATTTTTTTATGACATGC TTTACACAGTGAGAGCTCACAGACTGGTACACTTTGGTTTGGTGCTTCGC GGTTTGCGTCAGAAAATGTTGACCAGGTCAGGGTTGTCAGAAAGACCTGT GTCAGAGTGTTTACAATCAAGCGTGAAGTTTACTACTCCGGAGTATTATC CCATTGCCGCATTCTTTCGGCATCGTGCTCAAAAGAGCCCAAGCACACAT TCGTGCCGGCGGAGGAGGTGTGTGACGGGACGACTAGAACGTTTTGTTGT GAGCACTTACTTTTGGAACCGGAAGAAATGCTCGCTCCCGTAGCAGGGAG TGGCACCGAACCCGCATCTACCGTTCTCAAACCACATCTAATGGCGAGCA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig129:14903..19752-

>mRNA_Ecto-sp13_S_contig129.2384.1 ID=mRNA_Ecto-sp13_S_contig129.2384.1|Name=mRNA_Ecto-sp13_S_contig129.2384.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1098bp|location=Sequence derived from alignment at Ecto-sp13_S_contig129:14903..19752- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTACCTTTTAACCTCTCTGTACACCTTTCCACTACGGGACGCGTGGG
CACAGGTGTGACATACTCACAAGCAGTTTGCGTAGGTGTAGTGTGGCTTC
TTCCCAGCGCAAGGGATAAGGGGACAGTGATGACGGCGAGGACGATCAAT
GGGTCGATCAAAATCAGGGAGAAACACAAGATTTTCAAGGAGACTGGCTC
CCCGTTCGATGCGACACCGATTCACTCCATCAAGCTCCGGCCAGGCGGGC
ATGATACTCTCCCGGCAAAGCCCATCGATGTGTCGGCATTTTCATACTCG
AAGAGAACGGCGCACCAAAGCCCTCTGTCGTTTCTAAAGCGGGGGACGGG
GAACGGCGGGACCGTGATCCCTTTCGGTTCTGGCGAAGAATCCCCCCCCG
GCGGCGCAGCGAAAGGGGGGCAAAGCAAACGGGCGTCGGCTAGAGCAGCA
GCCGTAAAAAAGACCAAGCTGCGGGACTTCCAGGCGTTTGCCGAGCGTCC
GAACCCTCCGAACACGGAGTTCCGGAGATTCTACGAGCGCGGAGACTTGC
CCGTGCAGATTGACCACGGAGGAGTACACAACAGGATCGCATGGAAGGTC
GACATCCAGAAGCTGGATTTCCACCACTACCTACCGATTTTCTTTGATGG
GCTGCGCGAGTTGGAGATGCCCTACGCGTTTCTCGCGGAGCAGGGCGTGT
ACGACATGCTCAGCGCCGGGTCCAACAAAGTCCTCCCTGTCATCCCGCAG
CTCATCATCCCCATCAAGACCGCGCTCAACACGAGACAGAAGGCGGTGAT
CGTCAAGGTCCTCAAGGTGTTGCAGTCGCTCGTCACGTGCGACCAGGGCC
CCGACGGGCAGGGACTCATCGGGCAGGCGCTTGTGCCCTACTACCGTCAG
ATCCTGCCAGTGCTCAACATCTTCATCCGGCAAAACGACAACCTCGGAGA
TGGCATCGACTACGGCCAGCAGAGGCGGGAAAACCTCGGCGAGCTCATCA
TGGAAACCCTGGAGGCGTTCGAGGTGAATGGCGGCGAGGACGCCTTCATC
AACATCAAGTACCTCGTGCCTGTGTTTCAGAGCGTTGTCGTCAGCTAA
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