mRNA_Ecto-sp13_S_contig129.2381.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig129.2381.1 vs. uniprot
Match: D7FNG9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG9_ECTSI) HSP 1 Score: 420 bits (1080), Expect = 1.650e-144 Identity = 212/243 (87.24%), Postives = 217/243 (89.30%), Query Frame = 1
Query: 1 MRVGNTQSIFYVPGFISGADEHQLLERIHAQESSCEWVTLRSRRLKCWGGQPGASFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLMHSIDAVREETVGCDSSSSDVDKGXXXXXXXXXPVINGAAAGAPEGTILRRKLRVSLTFRRVRVANNKGEETAAADQQK 729
MRVGNT SIFYVP FISGADE QLLERIHAQ SS EWVTLRSRRLKCWGGQPG SFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRL+HSIDAVREETVGC SS DV K PVINGAAAGAPEGTILRRKLRVSLTFRRVR A+ +GEET + +K
Sbjct: 81 MRVGNTPSIFYVPDFISGADEQQLLERIHAQASSNEWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCGGSSGDVGKRGGGGVGGGAPVINGAAAGAPEGTILRRKLRVSLTFRRVRAAD-RGEETGGSGPEK 322
BLAST of mRNA_Ecto-sp13_S_contig129.2381.1 vs. uniprot
Match: A0A835ZDT2_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT2_9STRA) HSP 1 Score: 187 bits (476), Expect = 2.130e-54 Identity = 108/244 (44.26%), Postives = 139/244 (56.97%), Query Frame = 1
Query: 4 RVGNTQSIFYVPGFISGADEHQLLERIHA-QESSCEWVTLRSRRLKCWGGQ---PGASFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIET-SRIGRPGVETRPQASLVLRALSLVVFADDAYSRLMHSIDAVREETVGCDSSSSDVDKGXXXXXXXXXPVINGAAAG-APEGTILRRKLRVSLTFRRVRVANNKGEETAAA 717
R G S++Y P F++ + +++++++A E W LR+RRL+CWGGQ G + P L PW+ LC LV G+F PNHVL+NEYQPGQGIM HTDGP Y PRTATLSL SDAV + R + IG V+ P +L+LR SLVVFAD AY+ H ID V EE VG S + V+NG AG A E ++ R LR+SLTFR V A G++ A
Sbjct: 14 RTGTIPSVYYNPDFVTASLADEIIKQVYAVPEGHARWTVLRTRRLQCWGGQLQADGRAHDPSDLCPWLQQLCTLLVTCGIFPAHAPPNHVLINEYQPGQGIMPHTDGPMYYPRTATLSLMSDAVFKLAQRPRSPGDIG--SVDLSPTEALLLRNRSLVVFADAAYTDFTHGIDFVHEEAVGDGSGGT-------------CSVVNGPEAGVAEEEVVVERALRISLTFRHVPDAARTGQQQMPA 242
BLAST of mRNA_Ecto-sp13_S_contig129.2381.1 vs. uniprot
Match: A0A7S2G6U9_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6U9_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.840e-50 Identity = 99/222 (44.59%), Postives = 137/222 (61.71%), Query Frame = 1
Query: 19 QSIFYVPGFISGADEHQLLERIHA-QESSCEWVTLRSRRLKCWGGQPGASFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLMHSIDAVREETVGCDSSSSDVDKGXXXXXXXXXPVINGAAAGAPEGTILRRK-LRVSLTFRRV 678
+++ Y+P +++ +E ++ + +A +S WVTLR RRL+CWGG+P EPLPPW+ L E LV G+F E PNHVLLNEY+ G+GIMAHTDG FY P+TATLSLG AVM F+PR++ +G V+ RP A +VLR SLVVF ++AY +H+I A + VG + PV N +AGA G ++ R +R+SLTFR +
Sbjct: 100 KTVSYLPEWVAEDEEAAIMAQTYAVPDSHPSWVTLRGRRLQCWGGEPRRDSAAEPLPPWLQRLSEGLVEAGIFPAEVAPNHVLLNEYKAGEGIMAHTDGDFYHPQTATLSLGGTAVMTFAPRVQPRAVGL--VDGRPVAEVVLRPRSLVVFREEAYLDHLHAIAASHSDEVGAAA-----------------PVANLESAGARLGEVIARPAVRLSLTFRHI 302
BLAST of mRNA_Ecto-sp13_S_contig129.2381.1 vs. uniprot
Match: A0A4D9DGD1_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DGD1_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.160e-49 Identity = 98/229 (42.79%), Postives = 131/229 (57.21%), Query Frame = 1
Query: 10 GNTQSIFYVPGFISGADEHQLLERIHAQESSCEWVTLRSRRLKCWGGQPGA---SFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLMHSIDAVREETVGCDSSSSDVDKGXXXXXXXXXPVIN--GAAAGAPEGTILRRKLRVSLTFRRVR 681
G +FYVP +IS E +++E H+ + +WV LR RRL+C+GG+P SF+ E LPPW+ +C +L++ GVF EE PNHVLLNEY+PGQGIMAH DGPFY R A +SLG A+ F R+ I E+ P ++VL SL+VF +AY +H I AV EE VG ++ PV+N G L+R LR+SLT RRV+
Sbjct: 129 GPPDGVFYVPEYISKEMEQEIMEVAHSMPVN-QWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESGPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTT--------------PVLNLERLEGRINVGDRLKRALRLSLTCRRVK 342
BLAST of mRNA_Ecto-sp13_S_contig129.2381.1 vs. uniprot
Match: A0A7S2G3H8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3H8_9STRA) HSP 1 Score: 166 bits (421), Expect = 7.240e-47 Identity = 90/193 (46.63%), Postives = 117/193 (60.62%), Query Frame = 1
Query: 109 WVTLRSRRLKCWGGQPG--ASFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLMHSIDAVREETVGCDSSSSDVDKGXXXXXXXXXPVINGAAAGAPEGTILRRK-LRVSLTFRRV 678
W++L RR++CWGGQP F PEPLPPW+ +C +LV GVF E RPNHVL+NEY G+GI+ H+DGP Y P+TATLSLG A+M F PRI + IG V + P ++LR SLVVF D AY MH+I + + + VG + IN A +GA G +++R +RVSLTFR V
Sbjct: 16 WISLSGRRVQCWGGQPNERTKFVPEPLPPWLVDICTALVDAGVFPSEVRPNHVLINEYANGEGILPHSDGPMYFPKTATLSLGGSAIMTFEPRISSGDIGE--VSSDPICEVILRPRSLVVFEDAAYIDYMHAIASRQTDQVGSRAVP-----------------INLALSGARHGEMVQRPAIRVSLTFRHV 189
BLAST of mRNA_Ecto-sp13_S_contig129.2381.1 vs. uniprot
Match: A0A2R5GWX9_9STRA (Alpha-ketoglutarate-dependent dioxygenase alkB-like 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWX9_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.010e-41 Identity = 89/218 (40.83%), Postives = 120/218 (55.05%), Query Frame = 1
Query: 19 QSIFYVPGFISGADEHQLLERIHAQESSCEWVTLRSRRLKCWGGQPGASFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLMHSIDAVREETVGCDSSSSDVDKGXXXXXXXXXPVINGAAAGAPEGTILRRKLRVSLTFR 672
+ ++Y+P F + + +LE+ +++ +S W +RSRRL+C +R +PPW+D L SLV G+FS RPNH LLNEY+PGQGI+ HTDGP Y A +SLGS A F+ R+ T IG E R A+L+L+ SLVVFA DAY +HS+ A+ EE V D V N AA A G + R RVS+T R
Sbjct: 90 RDVWYIPNFCTVEEHDDMLEQTYSKAAS--WKDIRSRRLQC--------YREPEMPPWLDTLASSLVQAGIFSPAQRPNHALLNEYEPGQGILGHTDGPVYHSLVACISLGSPATFRFTERLLTDEIGVR--EARELATLLLQPRSLVVFAADAYREALHSVPALLEEVVSAD-------------------VANIEAAQASVGDRIPRTTRVSITMR 276
BLAST of mRNA_Ecto-sp13_S_contig129.2381.1 vs. uniprot
Match: A0A7S0PB53_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PB53_CAFRO) HSP 1 Score: 155 bits (393), Expect = 3.210e-41 Identity = 95/221 (42.99%), Postives = 122/221 (55.20%), Query Frame = 1
Query: 43 FISGADEHQLLERIHAQ--ESSCEWVTLRSRRLKCWGGQPGASFR---PEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPG---VETRPQASLVLRALSLVVFADDAYSRLMHSIDAVREETVGCDSSSSDVDKGXXXXXXXXXPVINGAAAGAPEGTIL-RRKLRVSLTFRRV 678
F+S A E LL + + E+S WV LR RRL +GG P R EPLPPW+ A+ + LV G F E+ RPNHVL+N Y PG+GI+ HTDGP Y P TATLSLGSDAVM F+PR+ + +G +E L SLVVF+D+AY+ +H + AV E V +N A+ G EG+++ R LRVSLT R V
Sbjct: 104 FLSAACEADLLRCVLSPVYEASGRWVRLRGRRLLQFGGTPMPGPRLLGREPLPPWLGAVVDRLVATGAFPEDKRPNHVLVNAYGPGEGILPHTDGPLYFPCTATLSLGSDAVMRFAPRVPSELVGTSSQSHLEAAKSFDAGLARRSLVVFSDEAYTSALHDVAAVGEHRVTA-------------------KCLNAASLGWAEGSLIPRAPLRVSLTMRHV 305
BLAST of mRNA_Ecto-sp13_S_contig129.2381.1 vs. uniprot
Match: A0A482RD56_9ARCH (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RD56_9ARCH) HSP 1 Score: 151 bits (382), Expect = 1.630e-39 Identity = 92/231 (39.83%), Postives = 121/231 (52.38%), Query Frame = 1
Query: 1 MRVGNTQSIFYVPGFISGADEHQLLERIHAQESSCEWVTLRSRRLKCWGGQPGAS--FRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLMHSIDAVREETVGCDSSSSDVDKGXXXXXXXXXPVINGAAAGAPEGTILRRKLRVSLTFRRVRVA 687
+R G+ +++YVP + + L+ I + WV L+ RRL+ WGG A E LPP+ + + ++L+ GVF E RPNH+L+NEY PGQGIM HTDGP Y PR ATLSLGS A+M FS R ++R + L+L A SLVVF DDAY+R+ H I A G P +N A P L R R+S+T R VRVA
Sbjct: 108 LRAGSIDTVYYVPHALPPSVASVLMAAIDCAAYAHRWVQLKQRRLQMWGGMVRADGLHDVEALPPFAERIVDALMRAGVFPTELRPNHLLINEYLPGQGIMPHTDGPAYTPRVATLSLGSAALMRFSERDRSTR------RLHAREELLLGAGSLVVFTDDAYTRMEHEIPADEFSQPGI-----------------VCPCVNSDAVAEPG---LPRTRRISITVRHVRVA 312
BLAST of mRNA_Ecto-sp13_S_contig129.2381.1 vs. uniprot
Match: UPI001C9126C5 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6-like isoform X1 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C9126C5) HSP 1 Score: 145 bits (367), Expect = 1.730e-38 Identity = 91/221 (41.18%), Postives = 120/221 (54.30%), Query Frame = 1
Query: 22 SIFYVPGFISGADEHQLLERIHAQESSCEWVTLRSRRLKCWGGQPGA-SFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMH-FSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLMHSIDAVREETVGCDSSSSDVDKGXXXXXXXXXPVINGAAAGAPEGTILRRKLRVSLTFRRV 678
++ YVP F++ A+E +LLE ++A W L RRL+ WGG P PE +P W+ A E + G F E RPNHVL+NEY PGQGIM HTDGP + P T++LGS A++ + PR + S+ P E SL+L SL+V DDAY L+H I A E+TV V+NGA A G+ L+R+ RVSLT R V
Sbjct: 15 TVHYVPEFVTEAEEQRLLELVYAAPRP-RWTQLAHRRLQNWGGLPHPRGMLPEQIPTWLQAPMERIAALGCFGE-LRPNHVLVNEYLPGQGIMPHTDGPLFAPVITTVTLGSHALLDLYRPRQDDSQEASPA-EPEAVGSLLLARRSLLVVRDDAYHHLLHGIAARTEDTV-------------------TDAVLNGAEQAA--GSRLQRQTRVSLTIRHV 211
BLAST of mRNA_Ecto-sp13_S_contig129.2381.1 vs. uniprot
Match: UPI00165B441C (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165B441C) HSP 1 Score: 142 bits (359), Expect = 3.760e-37 Identity = 89/226 (39.38%), Postives = 120/226 (53.10%), Query Frame = 1
Query: 19 QSIFYVPGFISGADEHQLLERIHAQESSCEWVTLRSRRLKCWGGQPGA-SFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHF-----SPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLMHSIDAVREETVGCDSSSSDVDKGXXXXXXXXXPVINGAAAGAPEGTILRRKLRVSLTFRRV 678
Q+++YVP FIS +E LL++++ + +W L RRL+ WGG P E LP W+ CE + G F +T NHVL+NEY+ G+GIM H DGP Y P T+SLGS A++ F P E ++ VE+R Q SL++R SL+V DDAY RL+H I +++T+ V N AAGA G L R RVSLT R V
Sbjct: 21 QTVYYVPDFISPEEESYLLQQVYRAPRT-KWTQLSGRRLQNWGGVPHPRGMLGEELPAWLQNYCEKISSLGAFGGKTA-NHVLVNEYKRGEGIMPHQDGPLYHPTVTTVSLGSHALLDFYRPVGGPDGEAAQ----SVESRYQFSLLVRPRSLLVLQDDAYRRLLHGIQERQQDTL-------------------TERVANLGAAGARPGDTLSRTTRVSLTIRHV 221 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig129.2381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig129.2381.1 >prot_Ecto-sp13_S_contig129.2381.1 ID=prot_Ecto-sp13_S_contig129.2381.1|Name=mRNA_Ecto-sp13_S_contig129.2381.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=245bp MRVGNTQSIFYVPGFISGADEHQLLERIHAQESSCEWVTLRSRRLKCWGGback to top mRNA from alignment at Ecto-sp13_S_contig129:1451..3083+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig129.2381.1 ID=mRNA_Ecto-sp13_S_contig129.2381.1|Name=mRNA_Ecto-sp13_S_contig129.2381.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1633bp|location=Sequence derived from alignment at Ecto-sp13_S_contig129:1451..3083+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig129:1451..3083+ >mRNA_Ecto-sp13_S_contig129.2381.1 ID=mRNA_Ecto-sp13_S_contig129.2381.1|Name=mRNA_Ecto-sp13_S_contig129.2381.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=735bp|location=Sequence derived from alignment at Ecto-sp13_S_contig129:1451..3083+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |