mRNA_Ecto-sp13_S_contig1289.2377.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1289.2377.1
Unique NamemRNA_Ecto-sp13_S_contig1289.2377.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1289.2377.1 vs. uniprot
Match: D8LQ23_ECTSI (Exostosin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ23_ECTSI)

HSP 1 Score: 1406 bits (3640), Expect = 0.000e+0
Identity = 814/953 (85.41%), Postives = 828/953 (86.88%), Query Frame = 1
Query:    1 MLPYSPGNRXXXXXXXXXXXNDPCSMIKRV------GCGRCGTVNLVSRRTLVFVFAAGLLGAALVLLLSAGDRDRSSSLSSSLPSTSATTGFKATIPSGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAQXXXXGEGGNKPKITVKQAEGRGAGGGKVSVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERADMAQDMGEIWLHRAMLAHPWRVLNPEEADLFYVPMYPVLSMKLGNNRCGHKTHDELINTSVEYLALSSVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGINEKMLGWTRWGCGLDKMVTVPYTASSVLTTSEMIGGRAAEDRDIPFFFVGTARSRPERQNLDVVTGMAEGSVMMLGNHQSDWGMNSTQYAAHIARSSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQDALSRSEVEVEQLREGGRRGMSALLYGVTMGKEIGDMRPFLGTATKFVRASYALAGGGGTEGEGRSADMWTCNRYDPMNEEIDTAPRTTAKLPPPAGATRQWLAETETIVNVERSLLFCAPPNTGSLQFRMLAKRMQGLPHWAVSNDRSLLFDRKASGLELLDATDGHLMEKIYRENGSGWIKIGLVRDPVTRLLSAYLDLADRWREALSPPRGAADDSAPEQSSNHDRRRLRQSPDEGEPTGEDNDRHRQQGGSRDHAPLTGSEWDLLDAIVDRRRXXXXXXXXXXXXXXXXXNERIAYEGLHDTGRGGRNDGGGVFGGEGXXXXXXXXXXXXXXXXXXXXXXADGRLLQGERRPDAADQRVEVNNDDGREVSPEHHPLRHREMEEGAERRFFWQGSGGWDGTGAAGEDGGDRSAVGGGGXXXXXXXXXXXXXDIGVPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQ 2841
            MLPYSPGNR XXXXXXXX   DPCS+IK V      GCG C TVNLVSRRT VFVFAAGLLGAALVLLLSAGDRDRSSSLSSSLPSTSATTGFKATIP GSQ          XXXXXXXXXXXXXXXXXXXX   X   GEGG+KPKITV+QAEGRGAGGGKVSVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERADMAQDMGEIWLHRAMLAHPWRV NPEEADLFYVPMYPVLS KLGNNRCG KTHDELINTSVEYLALSSVYFRRFGGADH LVCAWWNC+ ALGPKPRMLLRRTVVGINEKML WTRWGCGLDKMVT+PYTASSVLTTSEMIGGRAAEDRDIPFFFVGTAR RPERQNLDVVTGMAEGSVMMLG+HQSDWGMNSTQYAAHIARS RFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQDALSRSE EVEQLREGGRRG+SALLYGVTMGKEIGDMRPFLGTATKFVRASYALAGGGGTEGEGRSADMWTCNRYDP  EE+D APRTTAKLPPPAGATRQWLAETETIVN ERSLLFCAPPNTGSLQFRMLAKRMQGLPHWAVSNDRSL+FDR+ASGLELLDATDGHLME+IY+ENGSGWIKIGLVRDPVTRLLSAYLDLADRWREALSPP                                        GGSRDHAPLTGSEWDL DAIVDRRRXXXXXXXXXXXXXXX  NE IAYEGLHD+G        GVF GEG      XXXXXXXXXXXXXXXX    LLQGERR DAADQ V+ NNDDGREVSPEHHPLRHREMEE  ERRFFWQG GGWDG GAAGEDGGDRSAVGG        XXXXXXX   VPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQ
Sbjct:    1 MLPYSPGNRGXXXXXXXX---DPCSIIKSVSSSKRGGCGCCRTVNLVSRRTFVFVFAAGLLGAALVLLLSAGDRDRSSSLSSSLPSTSATTGFKATIPPGSQQQSDLQELRGXXXXXXXXXXXXXXXXXXXXXXXX---GEGGDKPKITVRQAEGRGAGGGKVSVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERADMAQDMGEIWLHRAMLAHPWRVANPEEADLFYVPMYPVLSTKLGNNRCGGKTHDELINTSVEYLALSSVYFRRFGGADHTLVCAWWNCKSALGPKPRMLLRRTVVGINEKMLEWTRWGCGLDKMVTIPYTASSVLTTSEMIGGRAAEDRDIPFFFVGTARGRPERQNLDVVTGMAEGSVMMLGDHQSDWGMNSTQYAAHIARS-RFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQDALSRSEAEVEQLREGGRRGISALLYGVTMGKEIGDMRPFLGTATKFVRASYALAGGGGTEGEGRSADMWTCNRYDPKGEEVDAAPRTTAKLPPPAGATRQWLAETETIVNEERSLLFCAPPNTGSLQFRMLAKRMQGLPHWAVSNDRSLVFDREASGLELLDATDGHLMEEIYQENGSGWIKIGLVRDPVTRLLSAYLDLADRWREALSPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSRDHAPLTGSEWDLFDAIVDRRRXXXXXXXXXXXXXXX--NEGIAYEGLHDSG--------GVFDGEGGSGSRNXXXXXXXXXXXXXXXXXXXXLLQGERRTDAADQPVKANNDDGREVSPEHHPLRHREMEEEGERRFFWQGPGGWDGPGAAGEDGGDRSAVGG--------XXXXXXXXXXVPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQ 928          
BLAST of mRNA_Ecto-sp13_S_contig1289.2377.1 vs. uniprot
Match: A0A6H5JMN7_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMN7_9PHAE)

HSP 1 Score: 523 bits (1346), Expect = 2.540e-171
Identity = 321/716 (44.83%), Postives = 377/716 (52.65%), Query Frame = 1
Query:  715 RCGHKTHDELINTSVEYLALSSVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGINEKMLGWTRWGCGLDKMVTVPYTASSVLTTSEMIGGRAAEDRDIPFFFVGTARSRPERQNLDVVTGMAEGSVMMLGNHQSDWGMNSTQYAAHIARSSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQDALSRSEVEVEQLREGGRRGMSALLYGVTMGKEIGDMRPFLGTATKFVRASYALAGG-GGTEGEGRSADMWTCNRYDPMNEE--IDTAPRTTAKLPPPAGAT----RQWLAETETIVNVERSLLFCAPPNTGSLQFRMLAKRMQGLPHWAVSNDRSLLFDRKASGLELLDATDGHLMEKIYRENGSGWIKIGLVRDPVTRLLSAYLDLADRWREALSPPRGAADDSAPEQSSNHDRRRLRQSPDEGEPTGEDNDRHRQQGGSRDHAPLTGSEWDLLDAIVDRRRXXXXXXXXXXXXXXXXXNERIAYEGLHDTGRGGRNDGGGVFGGEGXXXXXXXXXXXXXXXXXXXXXXADGRLLQGERRPDAADQRVEVNNDDGREVSPEHHPLRHREMEEGAERRFFWQGSGGWDGTGAAGEDGGDRSAVGGGGXXXXXXXXXXXXXDIGVPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQ 2841
            +CG  THDEL++ SV+YL+ SS++F RFGGADH L+CAWW CR  LGPK RMLLRRTVVGINE++  WTRWGCG  KMVTVPYTASSVL TS+MIGGR AE RDIPFFFVGTAR RPER+NLDVV  +A+GSV++L N  S WGMNSTQYA H+ARS RFCF PRGDTESSRR+FDA+AAGCTPIVTEA+V +LPFS+                                 S  E+E+L+EGGRR  + LLYG+T G E+ D+ PF GTAT FVR    +A     T G   +A     N   P           R+  ++ P A       R+WL E+ETIV +ERSLLFCA PNTGSLQFRMLAKRMQG+PHW VSN+RSLLFDR+AS L L+D TDG  M++IY +NGSGWIKI +VRDPVTRLLS+YLDL D+WR  L                      L Q P                                 DA V R+R                  E  AYE  H++G+ G  DGG                                         DA                                                                             + VPT VEV+E ++ DVW  PVAFRP  SLCGQR+SPFDSVIPFERLQ
Sbjct:    5 QCGGLTHDELMDASVDYLSSSSLFFNRFGGADHVLMCAWWGCRNGLGPKHRMLLRRTVVGINERVFLWTRWGCGPRKMVTVPYTASSVLATSDMIGGRTAEARDIPFFFVGTARGRPERENLDVVADIAKGSVVILDNLPSRWGMNSTQYAEHMARS-RFCFSPRGDTESSRRLFDAIAAGCTPIVTEATVPMLPFSQ---------------------------------SAAELEKLQEGGRRVANKLLYGITEGPELSDIHPFFGTATNFVRERAEVARFLPSTGGPSDAAKKGVMNNLFPHRGRGYFSVGGRSILEIAPAARTGILIGREWLTESETIVVMERSLLFCAAPNTGSLQFRMLAKRMQGIPHWGVSNNRSLLFDREASELTLVDTTDGQSMKEIYSDNGSGWIKIAVVRDPVTRLLSSYLDLVDKWRAGLI---------------------LHQQPPHN------------------------------DAQVRRQRQLGLSLEQSDG------REDKAYEFSHNSGQSGNRDGG-----------------------------------------DA-----------------------------------------------------------------------------VRVPTLVEVLEAVRTDVWSAPVAFRPVSSLCGQRSSPFDSVIPFERLQ 511          
BLAST of mRNA_Ecto-sp13_S_contig1289.2377.1 vs. uniprot
Match: A0A6H5KWD0_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD0_9PHAE)

HSP 1 Score: 455 bits (1170), Expect = 7.230e-150
Identity = 216/307 (70.36%), Postives = 256/307 (83.39%), Query Frame = 1
Query:  619 MLAHPWRVLNPEEADLFYVPMYPVLSMKLGNNRCGHKTHDELINTSVEYLALSSVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGINEKMLGWTRWGCGLDKMVTVPYTASSVLTTSEMIGGRAAEDRDIPFFFVGTARSRPERQNLDVVTGMAEGSVMMLGNHQSDWGMNSTQYAAHIARSSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQDALSRSEVEVEQLREGGRRGMSALLYGVTMGKEIGDMRPFLGTATKFVR 1539
            ML+HPWRVL+PEEADLFYVP+YPVLS KL  +RCG  TH+EL++ SVEYL+ SS +F RFGGADH L+CAWW C  ALGPK RMLLRR VVGINE++L WTRWGCG  KMVTVPYTA+SVLTTS+MIGGR AEDRDIPFFFVGTAR RPER+NLDVV  +A+GSV++L +   +WGMNST+YA H+ARS RFCF PRGDTESSRR+FDA+AAGCTPIVTEA+VAVLPFS+  LNYSDFAVVVD   F TRE V  +V++ LSR+ VE+E+L+E  RR  + LLYG+T G E+ D+RP+ GTAT F +
Sbjct:    1 MLSHPWRVLDPEEADLFYVPIYPVLSFKLATSRCGGLTHNELMDASVEYLSSSSPFFNRFGGADHILMCAWWKCGEALGPKHRMLLRRAVVGINERLLRWTRWGCGRSKMVTVPYTANSVLTTSDMIGGRTAEDRDIPFFFVGTARHRPERKNLDVVADIAKGSVVILDDLAWEWGMNSTEYAEHMARS-RFCFSPRGDTESSRRLFDAIAAGCTPIVTEATVAVLPFSQTALNYSDFAVVVDSAGFRTRESVKGIVREVLSRTSVELEELQESARRAANGLLYGITEGPELSDVRPYFGTATNFAK 306          
BLAST of mRNA_Ecto-sp13_S_contig1289.2377.1 vs. uniprot
Match: A0A6H5LR87_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LR87_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 1.340e-113
Identity = 173/239 (72.38%), Postives = 196/239 (82.01%), Query Frame = 1
Query:  619 MLAHPWRVLNPEEADLFYVPMYPVLSMKLGNN---------RCGHKTHDELINTSVEYLALSSVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGINEKMLGWTRWGCGLDKMVTVPYTASSVLTTSEMIGGRAAEDRDIPFFFVGTARSRPERQNLDVVTGMAEGSVMMLGNHQSDWGMNSTQYAAHIARSSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSE 1308
            ML HPWRVL+PEEADLFYVP+Y  LS KL  +         RCG  THDEL++ SVEYL+ SS++F RFGGADH L+CAWW CR  LGPK RMLLRRTVVGINE++  WTRWGCG  KMVTVPYTASSVL TS+MIGGR AE RDIPFFFVGTAR RPER+NLDVV  +A+GSV++L N  S WGMNSTQYA H+ARS RFCF PRGDTESSRR+FDA+AAGCTPIVTEA+V +LPFS+
Sbjct:    1 MLFHPWRVLDPEEADLFYVPIYSALSSKLTEHSTIHLELRRRCGGLTHDELMDASVEYLSSSSLFFNRFGGADHILMCAWWGCRNGLGPKHRMLLRRTVVGINERVFKWTRWGCGPRKMVTVPYTASSVLATSDMIGGRTAEARDIPFFFVGTARGRPERENLDVVADIAKGSVVILDNLPSRWGMNSTQYAEHMARS-RFCFSPRGDTESSRRLFDAIAAGCTPIVTEATVPMLPFSQ 238          
BLAST of mRNA_Ecto-sp13_S_contig1289.2377.1 vs. uniprot
Match: A0A6H5KW63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW63_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 1.070e-64
Identity = 173/423 (40.90%), Postives = 200/423 (47.28%), Query Frame = 1
Query: 1585 RSADMWTCNRYDPMNEEIDTAPRTTAKLPPPAGATRQWLAETETIVNVERSLLFCAPPNTGSLQFRMLAKRMQGLPHWAVSNDRSLLFDRKASGLELLDATDGHLMEKIYRENGSGWIKIGLVRDPVTRLLSAYLDLADRWREAL----SPPRGAADDSAPEQSSNHDRRRLRQSPDEGEPTGEDNDRHRQQGGSRDHAPLTGSEWDLLDAIVDRRRXXXXXXXXXXXXXXXXXNERIAYEGLHDTGRGGRNDGGGVFGGEGXXXXXXXXXXXXXXXXXXXXXXADGRLLQGERRPDAADQRVEVNNDDGREVSPEHHPLRHREMEEGAERRFFWQGSGGWDGTGAAGEDGGDRSAVGGGGXXXXXXXXXXXXXDIGVPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQ 2841
            RSADMWTC   +   EE   APRT+A+LPP    TR+WLAE+ETIV +E SLLFCA PNTGSLQFRMLAKRMQG+PHW+ SN+RSLLFDR+AS LELLD TDG LM++IY ENGSGWIKI +VRDPVTRLLS+YLDL D WR  L     PP   A+D+   QSS+H+RR L Q   E EPT                           D ++ R R                                    GGG+                                                  +DG +   EH                         GT A   DG D                      + +PT VEV+E LK DVW  PVAFRP  SLCGQR+SPFDSVIPFERLQ
Sbjct:    2 RSADMWTCP--ETRLEEEMLAPRTSAQLPPLTNETREWLAESETIVVMEPSLLFCAAPNTGSLQFRMLAKRMQGIPHWSTSNNRSLLFDREASELELLDTTDGQLMKEIYSENGSGWIKIAVVRDPVTRLLSSYLDLVDTWRARLILQWQPP---ANDT---QSSDHNRRWLWQWWPETEPT---------------------------DEVLQRGR------------------------------------GGGI-------------------------------------------------KEDGDDHHREHSTA----------------------GTYAV-RDGSDA---------------------VRIPTLVEVLEALKTDVWSAPVAFRPVSSLCGQRSSPFDSVIPFERLQ 260          
BLAST of mRNA_Ecto-sp13_S_contig1289.2377.1 vs. uniprot
Match: A0A6H5L741_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L741_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.370e-27
Identity = 102/347 (29.39%), Postives = 124/347 (35.73%), Query Frame = 1
Query: 1801 QGLPHWAVSNDRSLLFDRKASGLELLDATDGHLMEKIYRENGSGWIKIGLVRDPVTRLLSAYLDLADRWREALSPPRGAADDSAPEQSSNHDRRRLRQSPDEGEPTGEDNDRHRQQGGSRDHAPLTGSEWDLLDAIVDRRRXXXXXXXXXXXXXXXXXNERIAYEGLHDTGRGGRNDGGGVFGGEGXXXXXXXXXXXXXXXXXXXXXXADGRLLQGERRPDAADQRVEVNNDDGREVSPEHHPLRHREMEEGAERRFFWQGSGGWDGTGAAGEDGGDRSAVGGGGXXXXXXXXXXXXXDIGVPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQ 2841
            +G+PHW VSN+RSLLFDR+AS + LLD TDG  M++I+ +NGSGWIKI +VRDPVTRLLS+YLDL D WR  L                                                   +   +  + D  V R+R                  E  AYE  H++G+ G  DGG                                         DA                                                                             + VPT VEV+E L+ DVW  PVAFRP  SLCGQR+SPFDSVIPFERLQ
Sbjct:   27 KGIPHWWVSNNRSLLFDREASEMTLLDTTDGQSMKEIFSDNGSGWIKIAVVRDPVTRLLSSYLDLVDTWRAGL---------------------------------------------------ILHQQSSINDPQVRRQRQLGLFLEQSDG------REGKAYEVFHNSGQNGNRDGG-----------------------------------------DA-----------------------------------------------------------------------------VRVPTLVEVLEALRTDVWSAPVAFRPVSSLCGQRSSPFDSVIPFERLQ 198          
BLAST of mRNA_Ecto-sp13_S_contig1289.2377.1 vs. uniprot
Match: A0A7S2RZT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZT5_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.410e-26
Identity = 100/354 (28.25%), Postives = 159/354 (44.92%), Query Frame = 1
Query:  472 SVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERA-DMAQDMGEIWLHRAMLAHPWRVLNPEEADLFYVPMYPVLSMKLGNNRCGHKTHDELINTSVEYLALS-SVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGINEKMLGWTRWGCGLDKMVTVPYTASSVLTTSEM------------IGGRAAEDRDIPFFFVGT----------------ARSRPERQNLDVV------TGMAEGSVMMLGN-----------HQSDWGMNSTQYAAHIARSSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQ 1392
            S F+YDG P  D+  L+ CY+    GV  W DER  ++AQ+ G +WLH A+  HP RV +P  A LF VP  P LS K     C  +  D  I +   + AL+ S ++ ++ G DH  +  WW  + A G     + + T + +       + W     K V  PY   ++LT  E+            +G   + +RDI  +F G+                A      Q  D +        +AE  V+ L              ++    +S +YAA + R+ ++C   RGDT +SRR++D++AAGC P++      V PF+  V ++  F V + P+    +    K++Q
Sbjct:  122 SFFMYDG-PAFDYHSLLDCYKTAF-GVDAWVDERMWELAQNTGALWLHEALRRHPRRVKDPSRASLFVVPFDPYLSWKAVE--C--EGEDHTIRSEKVFHALTHSHWWNKYHGRDHVFIAVWWGAKKAYGKDLWKMAKDTAILVTFDEAFASDW----QKAVMAPYVPHALLTQQELATCDGRRTLLSHLGVHHSFERDIGLYFRGSVMHGVNCKYGNTWVRKAAYGAMSQMADALFVATESVSIAENGVIKLPEDAQVDTTRLITQENQGHFSSAKYAAELLRA-KYCLHFRGDTTTSRRVYDSIAAGCVPVIISDGTNV-PFTGTV-DWKLFTVAI-PEIAILQSPPEKIIQ 461          
BLAST of mRNA_Ecto-sp13_S_contig1289.2377.1 vs. uniprot
Match: A0A6H5KVI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI3_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.720e-23
Identity = 76/176 (43.18%), Postives = 93/176 (52.84%), Query Frame = 1
Query:  109 TVNLVSRRTLVFVFAAGLLGAALVLLLSAGDRDRSSSLSSSLPSTSATTGFKATIP------SGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAQXXXXGEGGNKPKITVKQAEGRGAGGGKVSVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERADMAQDMGEIWLHRA 618
            T+NL+SR TLVFVFAA  LG  +VLL+SAGDR RS  L    P+     G KAT+P        SQ                                         ++P + V+ AE +     +V+VFVY+GVPELDH  LV CYR V  GV+PWQDER DMAQDMGEIW+HR+
Sbjct:   33 TINLMSRGTLVFVFAAAFLGELVVLLVSAGDRCRSMMLPPERPTIEG--GLKATLPLSKKKSDASQTNGDKDTGSATHTPGTTEGGGTLWRASRALEKAPAVVLSPADEPTMNVRTAEDQHPPS-RVAVFVYEGVPELDHMELVQCYRDVH-GVAPWQDERFDMAQDMGEIWMHRS 204          
BLAST of mRNA_Ecto-sp13_S_contig1289.2377.1 vs. uniprot
Match: A0A6H5L8I0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8I0_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.510e-22
Identity = 73/179 (40.78%), Postives = 96/179 (53.63%), Query Frame = 1
Query:  106 GTVN----LVSRRTLVFVFAAGLLGAALVLLLSAGDRDRSSSLSSSLPSTSATTGFKATIPSGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAQXXXXGEG-----GNKPKITVKQAEGRGAGGGKVSVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERADMAQDMGEIWLHR 615
            GTVN    L+S+RTLVFVFA   LGAA+VLL+  G+  RS  L    P+T +  GFKAT+P   +                               ++     +        KP + V+  + R   G KV++FVY+GVPELDH+ LV CYR    GV+PWQDER DMA++MGEIW+HR
Sbjct:   19 GTVNRTIILMSKRTLVFVFAVAFLGAAVVLLVPVGNCGRSMMLPPERPTTES--GFKATLPLSHKKSDEFQTKEDGDTGSTTHTPGTEGGGTPWRASRALKEWKAVVSSPEAKPIVNVRPVKHRHPPG-KVAIFVYEGVPELDHTELVQCYRSGHRGVAPWQDERNDMAENMGEIWMHR 194          
BLAST of mRNA_Ecto-sp13_S_contig1289.2377.1 vs. uniprot
Match: A0A8J6CHB5_DIALT (Exostosin domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHB5_DIALT)

HSP 1 Score: 108 bits (270), Expect = 6.040e-21
Identity = 122/397 (30.73%), Postives = 174/397 (43.83%), Query Frame = 1
Query:  502 LDHSWLVPCYRQVRDGVSPWQ-DERADMAQDMGEIWLHRAMLAHPWRVLNPEEADLFYVPMYPVLSMKLGNNRCGHKTHDELINTSVEYLALSSVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGINEKMLGWTRWGCGLDKMVTVPYTASSVLTTSEMIG----GRAAEDRD-------IPFFFVGTARSR---------PERQNLDV----VTGMAEGSVMMLGNHQSDW--------------GMNSTQYAAHIARSSRFCFCPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDPDAFTTRERVTKVVQDALSRSEVEVEQLREGGRRGM-----SALLYGVTMGKEIGDMRP-FLGTATKFVRASYALA 1557
             + S L+ C+ + R    PW  DE   M     EIW  + ++ HP RV    +A++F VP++P+LS KL  N CG  THDE +  +   L   S +++R  G  H +V A    + ALG + R  LR +++   E       WG GLD   + P T +   T     G    GR  + +D       I  +F GT  +          P+ Q++ V    +      SV+ L   +S                G ++ +YAA I +S++FC  PRGDT +SRR +DAV AGC PIV    +  LPF E +    + AVV  P        V+ +      R+ +E   L  G RR         L YG   G    D RP F G     VRA +  A
Sbjct:   66 FNFSNLLGCFHK-RHSCEPWACDEHPGMDHVAPEIWATQFLMHHPARVSQAMDAEIFLVPVWPLLS-KLVGNACGQGTHDERMRKANAALR-GSAHWQRVPGR-HFVVAAGPRAQSALGDELRRSLRGSMIANEES------WG-GLD-WTSEPDTTAPAFTLRAADGEPGEGRMVDFQDVWGTQRHISLYFRGTYSNNAGHELNKKDPKGQDVRVKLIKLAAEIPRSVIKLLPVKSGISRRLLKATEGVPREGRSTAEYAAEI-QSAQFCLVPRGDTLTSRRFYDAVLAGCIPIVLSDGMP-LPFREELHAQYERAVVSVPLLRFMAAPVSTI------RNAIETATLTAGERRHALFELREELRYG--SGSPF-DARPEFGGAVPHIVRAVHRRA 439          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1289.2377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ23_ECTSI0.000e+085.41Exostosin domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JMN7_9PHAE2.540e-17144.83Exostosin domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KWD0_9PHAE7.230e-15070.36Exostosin domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LR87_9PHAE1.340e-11372.38Exostosin domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KW63_9PHAE1.070e-6440.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L741_9PHAE1.370e-2729.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RZT5_9STRA3.410e-2628.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5KVI3_9PHAE1.720e-2343.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8I0_9PHAE1.510e-2240.78Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A8J6CHB5_DIALT6.040e-2130.73Exostosin domain-containing protein n=1 Tax=Diacro... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1289contigEcto-sp13_S_contig1289:201..11877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score1413.7
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LQ23
Model size2841
Hectar predicted targeting categorysignal anchor
Exons12
EggNOG free text desc.macromolecule glycosylation
EggNOG OGsKOG1021@1,KOG1021@2759
Ec32 ortholog descriptionExostosin-like
Ec32 orthologEc-15_001230.1
Cds size2841
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1289.2377.1prot_Ecto-sp13_S_contig1289.2377.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1289 201..11877 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462689.4474487-CDS-Ecto-sp13_S_contig1289:200..9801681462689.4474487-CDS-Ecto-sp13_S_contig1289:200..980Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1289 201..980 -
1681462689.4631975-CDS-Ecto-sp13_S_contig1289:1762..20201681462689.4631975-CDS-Ecto-sp13_S_contig1289:1762..2020Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1289 1763..2020 -
1681462689.4734256-CDS-Ecto-sp13_S_contig1289:2908..30231681462689.4734256-CDS-Ecto-sp13_S_contig1289:2908..3023Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1289 2909..3023 -
1681462689.4861565-CDS-Ecto-sp13_S_contig1289:3421..35671681462689.4861565-CDS-Ecto-sp13_S_contig1289:3421..3567Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1289 3422..3567 -
1681462689.5012493-CDS-Ecto-sp13_S_contig1289:4034..41701681462689.5012493-CDS-Ecto-sp13_S_contig1289:4034..4170Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1289 4035..4170 -
1681462689.5119288-CDS-Ecto-sp13_S_contig1289:4537..46361681462689.5119288-CDS-Ecto-sp13_S_contig1289:4537..4636Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1289 4538..4636 -
1681462689.52215-CDS-Ecto-sp13_S_contig1289:5192..53121681462689.52215-CDS-Ecto-sp13_S_contig1289:5192..5312Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1289 5193..5312 -
1681462689.5320742-CDS-Ecto-sp13_S_contig1289:6148..62521681462689.5320742-CDS-Ecto-sp13_S_contig1289:6148..6252Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1289 6149..6252 -
1681462689.5423486-CDS-Ecto-sp13_S_contig1289:7050..72101681462689.5423486-CDS-Ecto-sp13_S_contig1289:7050..7210Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1289 7051..7210 -
1681462689.5518553-CDS-Ecto-sp13_S_contig1289:7672..78791681462689.5518553-CDS-Ecto-sp13_S_contig1289:7672..7879Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1289 7673..7879 -
1681462689.5608995-CDS-Ecto-sp13_S_contig1289:9340..94421681462689.5608995-CDS-Ecto-sp13_S_contig1289:9340..9442Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1289 9341..9442 -
1681462689.5701966-CDS-Ecto-sp13_S_contig1289:11263..118771681462689.5701966-CDS-Ecto-sp13_S_contig1289:11263..11877Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1289 11264..11877 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1289.2377.1

>prot_Ecto-sp13_S_contig1289.2377.1 ID=prot_Ecto-sp13_S_contig1289.2377.1|Name=mRNA_Ecto-sp13_S_contig1289.2377.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=947bp
MLPYSPGNRGGSGGSGGGGGNDPCSMIKRVGCGRCGTVNLVSRRTLVFVF
AAGLLGAALVLLLSAGDRDRSSSLSSSLPSTSATTGFKATIPSGSQQQSD
QQELRGGGGGGGGDTSPSSTPGTSGGIAQEEEEGEGGNKPKITVKQAEGR
GAGGGKVSVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERADMAQDMGE
IWLHRAMLAHPWRVLNPEEADLFYVPMYPVLSMKLGNNRCGHKTHDELIN
TSVEYLALSSVYFRRFGGADHALVCAWWNCRGALGPKPRMLLRRTVVGIN
EKMLGWTRWGCGLDKMVTVPYTASSVLTTSEMIGGRAAEDRDIPFFFVGT
ARSRPERQNLDVVTGMAEGSVMMLGNHQSDWGMNSTQYAAHIARSSRFCF
CPRGDTESSRRIFDAVAAGCTPIVTEASVAVLPFSEHVLNYSDFAVVVDP
DAFTTRERVTKVVQDALSRSEVEVEQLREGGRRGMSALLYGVTMGKEIGD
MRPFLGTATKFVRASYALAGGGGTEGEGRSADMWTCNRYDPMNEEIDTAP
RTTAKLPPPAGATRQWLAETETIVNVERSLLFCAPPNTGSLQFRMLAKRM
QGLPHWAVSNDRSLLFDRKASGLELLDATDGHLMEKIYRENGSGWIKIGL
VRDPVTRLLSAYLDLADRWREALSPPRGAADDSAPEQSSNHDRRRLRQSP
DEGEPTGEDNDRHRQQGGSRDHAPLTGSEWDLLDAIVDRRRRRRRRRQRG
PGPRQEEENERIAYEGLHDTGRGGRNDGGGVFGGEGGSGSRNEGTDNQGG
ANASGGRGADGRLLQGERRPDAADQRVEVNNDDGREVSPEHHPLRHREME
EGAERRFFWQGSGGWDGTGAAGEDGGDRSAVGGGGGGGGDGGGDGDGDDI
GVPTFVEVVETLKADVWGGPVAFRPAVSLCGQRNSPFDSVIPFERLQ
back to top

mRNA from alignment at Ecto-sp13_S_contig1289:201..11877-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1289.2377.1 ID=mRNA_Ecto-sp13_S_contig1289.2377.1|Name=mRNA_Ecto-sp13_S_contig1289.2377.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=11677bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1289:201..11877- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTACCGTACAGCCCAGGAAACCGCGGCGGCAGCGGCGGTAGCGGCGG TGGCGGCGGCAACGATCCCTGCAGCATGATCAAAAGAGTCGGATGCGGCC GGTGCGGAACGGTGAACCTGGTGAGCCGACGAACTCTTGTGTTTGTCTTT GCGGCTGGCCTTCTCGGCGCCGCGCTCGTGCTCCTTCTCTCGGCCGGCGA CCGCGACAGATCCTCTTCGCTCTCGTCGTCGTTGCCGTCGACCTCGGCAA CGACGGGCTTCAAGGCCACGATCCCGTCGGGATCGCAGCAGCAGAGCGAT CAGCAGGAGCTGCGAGGAGGCGGCGGCGGCGGCGGCGGCGACACCTCGCC ATCATCAACGCCGGGAACAAGCGGAGGAATAGCGCAAGAAGAGGAGGAGG GAGAGGGGGGCAACAAGCCCAAGATCACGGTGAAACAGGCGGAGGGCCGA GGCGCTGGGGGGGGAAAGGTGTCCGTCTTCGTGTACGACGGCGTGCCCGA GCTGGACCACTCGTGGCTGGTGCCGTGCTACCGACAAGTTCGCGATGGCG TCTCCCCGTGGCAGGACGAGAGAGCGGACATGGCGCAGGACATGGGGGAA ATATGGCTGCACCGGTACGCAAACCCCAACCCTCCCCTTTTACTGCTGTT TGATCCGGCTGGTGCTTCTTCTGTGCTCACAGATGGGTGGTGTTCCTCTC GCAGCAGGGGGGCACACATGTAGTGTTTGCCGTGCCTGCGTTTAATTTTA ACACGTGTGTTGGTGCGGTTAGAAACAACAACACACGTGCTGCTCTTTGC GGCTGGTTCCTCGGCATGAACAACACCAGTTCTGTTTGGCAAGTGCAAGT TACGACAGATGCGGCGATTACTTTCTAGAGGCGCATCAGGCTCCGTCTGG GAGTGTTGCACGTACATATTGCATGTACATGGCGGGGTAGAGGCGCTTGT CGCTTGGGGGAGGGCGAATGAAATATTGCCCTCCCGGGTTGTCATTTGAC CGCTTTTGTTTGCTTCACTGGTCCACAGAGTTGCGGCGACGGTTTACGAA ACATCGTTTCAAGAGAAGGTGAAAGTAGTAGTTGTTACGCCTCTCTCTGG CCGATACATGTACGAGAGAAATTTCCATAATCCAGCGATGTCTCCCCTCG TGGATAACAGGCTCCACAAGACAAGAGTTGGTGACCATCTTGTGCTTCGG ACGATTAGTTGTGCTTTGTTGTTTTAGTTCTCGAACGAGCGGCCTCCGAA CGTGTGAACAAGAACATGCTGATGCTCACAGATAGCGCCCGTACTTTCAG AACTTCGCTGTTAAGAAATTGAGACTCGAAAAAATCAGAAGCTTAGAGCT TGAGCACCATTTGTGAGCCCTGTCAAGAACCTGTTAGACTTAGACCTATA CAGCGACCATTTGTAGCCCTCAAGAGGAACTAAGAACCCCAGCCTCGGCC GAAACTAAAACAGAGGTTCTTAAGTGCAGGCGCCATCTGAATTGGTCGTG GCCCCGGTAAGAAGGTCGACGGAATGTTTGTCACACCACCCTCGAGTGTC GGAGCCAAGACTGCTTGTACCATGGGTACTCTTGTGTTAGATCTCGCCTC CAACCAGTCTCCACCCACTTGTTTTCTCTCTTGCAACGACCAACACCGAA CGATCTTGTTGAGCCTGTCACCCAGCGGGGAGATACCGTATCGCTGTATG CTGCACGGGTAGCCGTAGAAACACAGGTCGTGCTTTTTACGCCAACGCTA TGGATTCATTATTGATCTATCCCGAACGGACTGTTAAGTCTATGTGAGGA AGAGATGGAGGTGTGTTCTTGTGAGTACGAAGAAGAAGAAGATACGACTC TCTGTCGAAAATGCTGAAGTGTGCATTTTCGGATTGTCGCTCAAGCCTGG TTTGTAAGCACAACTATCATACGGACAGCGGTACTTTGCTGCATGCACGA AATGGGGCGGCGGGATGTAGCACGAGTTCCTTACCTACAACAATCAACCC CGCTTGTGCACCCCCCGGCTTTGCTGGGGGGAAAGCCCCAACCAGACTAC GGTGGATTGAGGAGAAGCACGCAGTTAGGTGGACCAATACGGATATATTA GAAGATAATGAGCAGAGACCGGAACGATTTTTAATGTGAAGCTGACAACA ACAATGCAGCAGCCCATGCACGCATCCTTGTGTCCCCTGCCCCCCTCCCC GGCCCCGGCTCGCCCCTCCCCCCCAATAGCGTCAATGCCACTGGGAAGAG AAGGTAGCACAGTACCTGGGATACTGTTCGCCAGAGAATGAGAACCGCGC TGGGTGAGACCTTGTGTAGTGGCAGATCCACGAGGGAGATGTCGACAACG ACAGCAGCTCGGTGAATTTCAGGACTGATCGACTGTTTCCCACCCGCCCA CCACCCCCTCTTTTCTCTTGCACTTGGTGGTTTAGCGCGATGCTCGCTCA CCCGTGGAGAGTACTCAACCCGGAGGAAGCCGACCTGTTCTACGTGCCCA TGTATCCGGTGCTGAGCATGAAGCTGGGTAACAACAGGTTAGAGGTTCTT TCTGCTGTTTGCGCAAGTGAGCCTGGGTGGTATCTAGGTTGTCTCCCTTT TTTATGTCTTGTTTGTCATCTGCCCGAAAAGTGTCATCCAGCGCGCATGC AGTAGTCTACGCAGGTTTTTCGAAGTTAGCAAAGATATTGGATACAGTAT AGAATCGGCTAGATTGGGGTTGGGATCTACCCGCCCCCTCCCTGGTCATT TTTTGTAATACATGTACTCTCTTTGCGTGGACGGTCCGGCACTACCTAGG TACCTTGCCCTCCGCCGAGACCCAAACATGTTTCGGTAATTTTGCTCCTC TTGGGCTGGGCTTAAAGCCCGCTTCGCACAATCCGCTTATGGGGGACGAC GGAAGGGATGCTAATTCTAGTCTTGTATCAAAGCGAGGAACATTACACGC ATGCTTTGAGGGGGACAGGTGCCGTCGACGCAAACGTATCCGTTGTGTCT GTGATCATTGCTTTGCTTGAGAGTACCGATATCCTTCCCCGATGTTTTCG CTTTGCTCTTCTATGGCAGCTCTGTTTGGAGGGAGAGAGAGCCCCCCGCC CTCTCAGTGTCCGTTTTGTCCCGCTTCCGTTTTCGGAAAGCCCTCAACGA GAAGTATCTAACGCCGCTGGTTCGGCACTATCATACTGATCATCCTGGTG TTTACTTCGTAGTAGTGAAGCTTTGAAAATCGGCCCATGGGTGGGGGGGG GGGGGGGGGGGTGTACTCATAGTCGTGCATGCGGTAGTGGTTATACATTT GACCCCGCATGCCTACAAAGCCGGAAGGGAGCCCTCANNNNNNNNNNTGT AACGTGGTTGTTGGTGGGTTGAGGGTGGGTTTGTGGAGGCGGCTGGGGGG GAGTGGGTGGCCGTCTGGGAGTGTACTCATAGTCGTGCATGCCGTAGTCG TTAGACCGTTGACCTCGCATGCCTACAAAGCCGGAACGGAGCTCTCAGGG TTCTCACCCGACCAGGCTTTCACATCACCAAGCGCGACACACTGTGAGGT ATTCGACGAGTCGCATGAAGGGTGCGCGGCAACCTGCTAAGGGTTTTCGG CATCCGGTCCATGGGAGGGGGGGGTTGATGTATTACGTTCTATGACCTAC GGTCATTGTCGCGACTCTCTTCTCCACGGTCGAGAGTCATCGAACCCGCA GACCTTCCCTGATCGTACGCCGTTGTGTAAGCATAGGGTGCGACACGCCG CGTCCGGGTGGCATTTTTAGCGTGTAACATAACAACAACGGTCCCTGTGT AACGGTGGTTCGATGTCTTCTTATTAGATGGTCTGAGGTGGAATACAACA GATCGCCAAGGTCTGAGGCCGGTGCATTCCTCGACACGGATGGGAAGGTG TGTCTCCTTGAGTCATTTTGTCACAACAAGAGACATGCAAACCAAATTCA TAGCCGTACTAAAACTCTTCCCGAACACAAACCTATCTTGGACGGCAGGT GCGGGCACAAGACGCACGACGAGCTCATCAACACCTCCGTCGAGTACCTC GCCCTGTCCAGCGTCTACTTCCGCCGCTTCGGCGGCGCCGACCACGCGCT TGTGTGCGCCTGGTGGAACTGCAGGGGGGCGCTGGGACCGAAGCCCCGCA TGCTGCTGCGCCGCACGGTGGTCGGTATCAACGAGAAGATGCTTGGGTGG ACCAGGTGCGCGCGCGGGCGGCGGAATCTGACTCTCATTCTGTTTGCCCG TGGGGGGGGGGGGAGGATCCTTGATATGGATGCTTTTGGCTGTTAGATAC ACGTGGGGGGGAGGGGGCTGGAGCTCGGCGGGAGATCCTTGGTGTGAATG CCTCACTCTCATTGGCTGTTAGGCGCACGATGGTGGGGGAGGTAGAGCTG GGCGGGGGATCCTTGATAAGAGTGTCTCACTTTTTTTTTTATTGCCTCGA GACTGGTGTGGGAGGCCCCGACAAGCTACTTTTTGGGTACACGGAGCTGT AGCGTGACCCACACCTACGTACGGGGCGCGCCGTGCGTTGGTCGTTCGAT TCCTCGAGAGAACGGTTTGGCCAAGTCGATCGGTGTTGGAGGAGCCTCGT GGTACGAACCAATCGCATTATTGCCTCGCAACTTGTTGCCCCGCAACGTG TCGCCCCGCAACGACAGGTGGGGGTGCGGGTTAGACAAGATGGTCACCGT CCCCTACACGGCGAGCAGCGTCCTCACCACCAGCGAGATGATCGGGGGGC GCGCGGCTGAGGACCGAGATATACCCTTCTTTTTCGTGGGCACGGCGCGG AGTCGCCCGGAGCGCCAAAACTTGGACGTAAGTCATCACATCATCGTCGC GAAAAAGGAAGACTCGCGCACCGATGTGTGCCGATGTGACGCTAGATATC ACGCCCCCAGGGCCGATTTTGAAAAGGTCGATTACTCCCACCACGAAGAG GATGCGTGAATCCGACGATATTTTCATGGAAAAGCGCTTGAACGAAACGA GACACTGCCATTTACGGCACCGCCATTTCTTTCAGCTGTGGAGAACTCGA GGGTTGAAAATCGGTCCGGAGGGTGTGATGTCTTACGTCATGCCACCTGC GCTAGATTCCTCCCGCCCTTCGGGTCTCTTCTGGTTGTATCTGGTGACGA AATAGGACTGAAAAAGTAAAAAGCGCGTTTGGAAAATATTGCTGTGTCTT CTCTGATGTGCTGATGGAAGAAGACTGGGGGGCGCAACTCAGTCTCGTAT GGGCGTTCCAATGTTGTTTTTTGCAGAACAAATATTTGACTATTGTATTT GTCTTCGCGTCTGTTGGGCGGTGTGGTAATGAACCTGTCATGATACCCCC GATGCCTTGGTCATGTACATACAGTTATCGTGGTTCCGAGATACGAGGGT TGTGTTACAAAGATCCTCGACCCTCTTATGTCTCAGAGCCCCCCTCTTGT ACCGAAATACGAGGGTACAACTACTTCGTACATTAAAGCGGGTCGAGTCC GTGACGACCGGTTCTGACCCTTTTACAAGGCACCCTCTTATAAAGTACCC TCTTATAACGGAGTCACGACCGCACGTTCGATTCCAACGGATCTTTGCAT CGTTCGCGTGCCAAATTTCCTTCAGGTGGTGACGGGCATGGCCGAGGGTA GTGTCATGATGCTCGGTAATCATCAATCGGACTGGGGCATGAACTCGACG CAGTACGCAGCACACATTGCCCGCAGCAGGTGCGATTGCTGCTGCTGCTG CTGCTGCTGCTGCTGCTGCTCAAGCGTGGATGTGAAAAACACGTGTTTTT AGTAGAACCACGCCCTATAGCCCTTGCCCTTCTGTAACCGTGTACATCTT GTTTCGTTTACGCGTTTTTTTTTTTTTTTCCACTTCGAACGTGACAAGTC GCGTTGTCTGCGATAGCACGCATTCCGCACCAGCGTATGAAGAAGAAACC TGCAGTGGTGATATCTCGATCTGGTAGTCTTTCTCTGTTTGTATTTGCTT TTCCTAATACCTTTTTCGGCACCGTGATAAGGCCCAGCTAAAACTACACA GCACGGAACACAACAGAGCAGTATTAATGGTAGGTACTTTTAGCTCAAAA GACTGCTGAAATCAGATCGTCGTCGTCCACAACAACCTCCACTCACCGCA AAGGATTCAACGCATCCCCTTGGACTGTTGTTGAGGTAATATCTCGAACA GGTAGTAAATCTGTGACTGTATTAGTATATCTTTTATTGACAAGAAGAAG AGACGACTTATCGAACTCGAACTGACGGATGCTTCCGTCGATCGACGTCC TCTTTGACTACGTGTTATCTCAAAGGGGCAGTCTTTCGGGATTGTAGAGA AGTACAATCGATTCATCTTTTTTTTTCTGTACAACTTTCAAAACGCTTTA TCGAACTCGAACGGACGGGTGATTCGATCGATCGACGTCCCCTGCGACTG CGGTGTTGTCTCGAACGGGTAGTATTTCTATGTTCGTTTCTTTTTTGAAA ACAAGATGAAAATATGCTTTTGTAGTAAAAATCGAACCCACGGGTGCTTC GGTCGGTCGATCGAGCAGGTTCTGCTTCTGCCCCCGGGGGGACACGGAAT CGAGCCGCCGCATCTTCGACGCCGTGGCCGCGGGCTGCACGCCGATCGTG ACGGAGGCTTCGGTAGCCGTCCTGCCGTTCTCGGAGTGAGTGTTTTCTTG ACACTGGGGATATCCTGTTGGTGTTTGGGGGGGGGGGGAGGGGGGGGTCT TCAGTGACCGTCTTCCCGTTCCTCGAGCGCGTGTTTTTTTTCGGGGATAC ATGTTGTTGGTGCTTGGGCGGGTGGTCGTGACATGAAAATGAAAGGTGCT GGCGCGGAGTGGGCGTCTTTTGTGCCCGCCCTCCCGTTCTCTGAGTGAGT CCTGTTTGATGTACGGGAAGGGGGGCCGTGAGATGATGATGGAAGGTGCT GGTCGGGGGGGGGGGTCTTCGGTGACCCTCCTCAAGTTCTCCGAGTGAGT GCTCCTCTTAATGATGTTTGGGGCGGGACGTCACACGAGAAATGGAAGGT GCTTGGCAGTTTGGGGGCACCACCGGGGAGGGGGGGTGCCTCATGCATCT TTTTTTTGTTGCTTTACCTTTTGTTTTGTTCGCTATTTGGTCTTGTGTCG TCCGGTCCCTCCGTCAGTTCGTTTTTTTTATGATTTTGTTTTTCCTTTTT TGTTTTCTCGGGGTGGGCGCGGGGTGCGGCGATGGCGTCAGGCATGTGCT CAACTACTCGGACTTTGCCGTGGTCGTGGATCCGGACGCCTTCACCACGC GGGAGAGGGTGACGAAGGTCGTTCAAGATGCCCTCTCGAGGTGATGATCA TGTCCTTTCTGGTCTTGTTTCATTTCTTGCTGGATAAGCTCCTTGGCACG GTGAGGGAAAGTCAGGGTTCCGCGAAAGAGAAATTGGGGGCCCCGCGAAG GGGAATTGGGCGTTCCGTGCATCGTGAATGGGAACTGGGGGTCCCGCGAG TGGGAAACGGGGGTCCCGCGAAACGGAATTTGGGGGTTCCGCGTAAAGGG TCGGGGTGTCATCTACCGTCAAGACGCAGACGTGAAGAGTCAAGAGTGAC AATGAGCAAGTTTCTTTGGACAAGAGGCGCTGCAAACTATTTACCACTGT TGTTTGAAACCGTCGATTTTTTTGTCGTACCGATCGCGACCGATGACGAC GATGCAGGTCGGAAGTGGAGGTGGAGCAGCTGCGGGAAGGCGGGAGAAGG GGCATGAGCGCGCTCCTGTACGGAGTGACGATGGGCAAGGAGATAGGCGA CATGCGGCCCTTCCTCGGCACCGCTACGAAGTTCGTCCGAGCGGTGCGGG CTGAATCTGCGTATGTCCCCCCCCCCCCTGCCCCCCCCCGCTTTGTTTCT ATGGCCCTTGTGTTTGTTTGCGGTAGTAACCGTGACGGTGGTCGAGTAGA TCATGTTGGCGGGGGCGAGAACCCTCACTCGGCGCACAGGGGATGATCGC ACTATGTTGTGTTAATATTGGCTAAGCACCCCCCGAGGCAGTTACACAAT GGTCTCTGGAAGTGAAAGCGCCAGAAAATGTATCAGGTCATTCGCAGCCC TCATCCGTATGCCAGGAAGCAAGCACAAGATGCTGAACACCCTTAACAGG ACGTAGCGCGACCTTTACAAGCCAATCAGCGCGCGGCCCTTTCCCTACTA CGAATCAACCATCCAACCACAGCAGTGTTCTTTTTCCAAAGAAACTGACC AATCAGAGCACCGAAGAAATTAGCCACCCGACGCGCTGCTCCACGAAACC AACGAATTAGAGCTACGCGCTCGCGGGGGGAGGAGGGACTGAGGGCGAGG GCAGATCGGCAGACATGTGGACCTGCAACCGGTATGATCCCATGAACGAG GAGATCGACACGGCTCCGCGGACGACTGCGAAGCTACCCCCCCCCGCCGG CGCAACGTGAGGATGGCAAGAGGTTATAGCAACAGCAGCGGAGTGTGCCA TGGAGAGGAGAGGAGCATGCAGCAGTTTCGTAGAGAATAAGCTTGTAGTA GTATCAGCAGCGGAGTGTGCAGCAGAGAGGGTATGGGCATGCAGTAGTGG TAGCAGCAGCAGAGTGTCATGATCAGCATGCGGTGTTGCTGTAGCAACAG CAGAGTGTGCGCAGATAGGATGATGTCGCAGCACGTCGATAAGTTTAGAT GATGCGGGGATGACTCCTGCGCAGAGACCAGAACGAGTTTTCTTGTAACA GCAACAATCAACCACTTCATGTGAACTACAACAACAACCGAATTATTCAA TTCCCTCTCCCGCATCCCCTCTCGGAAAAAACCATGACCAACTCCAAACT GCAGGCGACAGTGGCTGGCCGAAACAGAGACAATCGTGAACGTGGAGCGG TCCCTGCTTTTCTGCGCTCCCCCGAACACCGGGTCGTTGCAGTTTAGGAT GCTCGCCAAACGGATGCAGGTATGTCCCGTGTTGGTTAGGCTGCCGTTTG CGTGTCTTCTTATTGTTAGTATCGACCGCGCTAACCGGCTGACCAATGAA AAGACGTCACTCTCAGTGCGGTTGAAAACAAAAGAAGGCCACGATCTGGG ATCCCGTGCTGTTTTTTTTTTTTTTCGTGTTCTGTGTGTGTGTCTGTGTT TTGGTTGTTAGCATCGACGGCGCTAACCGGCTTTTCACTGGCAAGACGTC AGTCTTGTAACGGAATAAGAACACGAACACGCCTGCTAACCACACGGTTC GTCCGACAAGCGAGGCGTGTAAGTTTGTACGACGTTGTTCCGCGTTTTCC ACGTTAAACAATACGTACACAACGTCACTTTTTCTCCGCCTAACCCTTCC CGTCCTCTCCTTTGCCTGCGGACACCGGGCTGGACCCGAAACGGTAAAGC CCAACTCAGACAGGGGCGTCATCCCCCATCCTTCTGTCGAGCTCGCGAGC TAGATCTGGTGCTTTTTTCACCTAAAACGATAGTTGTCGATCGCGAAACG GTGGTGCGGTGCTTTTTGCGTAACGTTGAGTCGTCGTGCGTTTTTCTGCT GAGTAGTATGCAAGAGTATTGGGTGGGTGTGTTTTTTGGATATTTTTCAG TGTTGGCAAGGCAATATGTACACAGCGTGTCGCTTTCTTCTCCCAACCCT GCCCGTCTGACATGGACACACACCAGCTAAGAACCCACGGAAACTGAAAA AAAACAAATCGGAGGGTGCCATCCCCCATGACTCGCGAGCTACATCTGGT GCCCCGTTCATGCATGTACACAGCATATCACTTTCTTCTCCCAACCCTGC CCGCCTGACACCACGGACACACACCGGGTTCGGAACCCAAACTGCAAAAT TTCGAAGGGCCTCCCGCACTGGGCGGTGTCCAACGACCGGTCGCTGCTGT TCGACCGAAAAGCCTCGGGGCTCGAGCTGCTGGATGCAACGGACGGGCAC CTGATGGAGAAGATCTACCGAGAGAACGGGTCCGGTTGGATCAAGATCGG TCTCGTGCGTGACCCGGTCACCCGGTTGCTTTCGGCCTACCTCGACCTTG CCGACAGGTGGCGAGAGGCGCTGTCGCCACCGCGGGGGGCGGCGGATGAT TCTGCCCCCGAGCAGGTGTGTGTGTGTGTGTGTGTGTGTTTTGTGTTTTT GTTAGCATCGACCGCGCTAACCGGCTGACCAATGAAAAGACGTCAGTCTC AGTGCGGGTGAAAACCAAGGACACTTTTAAATTCCATTAACTGGGACCCC GTGAGGGGGCGGCACGGGGGAGACTATAATGACCTATTCTGTGTGTGTGT TTATCTTTGTGGCTGTAGTATTTGCATTGACCGCGCTAATCGGCTGACCA GCTGAAAGACGTCAATCTTGTAGCGGGTGAGTGTCTGTGTTCAACAGTAT CGACCACGCTAACCGGCCGACCAGTGAAAAGACGTCAATCTTGTCGTGGG TGTGTGTTTAGTAGCGTCGACCGCGCTAACCGGCCGACCAGTGATAAGAC GTCAGTCTCAGTGCCGACGAACACAGAAAAACCGCTTTTGTGTGTGTTCC TCTTTTATCCCGTCTGGTTTGTAGCTTTAGTATTTGCATCAACCGCGCTA ACCGGTTGACCAATGAAAAGACGCCAGTCACGGCTAGAAACGGGTAACGC TTCTAAAGGCATGTGTGCGCTATTGATCATTAGCTTTTGAGCAGAGCTCT TTTTTCTCACGCTAGGGAGAACGGAGCATATGCACTCGAAAGTTCCATTG CCGTTCCGTGATGTTGCTGCATTTCAACTACTGCTGGAAGTTCACGGCAA AGGTATAATAGAGGTGCGTAAACGCGCCAAGACAACTCTCAACGGGAACC GTTTGCTGCCGGCCGCTTACTGAGCCCCACCCCCGCCGCCACCGCAGAGT TCCAACCACGATCGACGGCGGCTACGGCAGTCGCCAGACGAGGGAGAGCC TACGGGCGAAGACAATGACCGACATCGCCAGCAAGGGGGAAGCAGAGACC ATGCACCGCTCACCGGAAGCGAGTGGGACTTGCTCGACGCTATCGTCGAC AGGCGAAGGCGGCGGCGGCGGCGGCGACAGCGGGGACCGGGGCCCCGGCA AGAGGAGGAAAACGAGAGAATCGCTTACGAGGGGTTGCACGACACCGGAA GAGGCGGTAGAAACGACGGCGGAGGCGTTTTTGGTGGAGAGGGCGGCAGC GGGAGCCGCAACGAAGGAACCGACAATCAAGGGGGCGCTAACGCCAGCGG TGGGAGGGGTGCGGACGGGCGATTACTGCAAGGCGAGAGAAGACCCGACG CAGCAGACCAACGCGTCGAGGTTAACAACGACGACGGCCGGGAGGTGTCG CCGGAGCACCACCCGCTACGACACCGCGAAATGGAGGAGGGAGCAGAGAG GCGGTTCTTCTGGCAGGGTTCCGGGGGTTGGGACGGCACCGGGGCGGCAG GCGAGGACGGCGGCGACAGGTCCGCCGTTGGCGGCGGCGGCGGCGGCGGC GGCGACGGCGGCGGCGACGGCGATGGCGATGATATCGGCGTCCCTACCTT CGTGGAGGTTGTGGAGACCCTCAAGGCGGACGTCTGGGGCGGCCCCGTGG CGTTCCGGCCGGCAGTGAGCCTGTGCGGCCAGCGCAACTCTCCGTTCGAC AGCGTTATCCCGTTCGAGAGGCTGCAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1289:201..11877-

>mRNA_Ecto-sp13_S_contig1289.2377.1 ID=mRNA_Ecto-sp13_S_contig1289.2377.1|Name=mRNA_Ecto-sp13_S_contig1289.2377.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2841bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1289:201..11877- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTACCGTACAGCCCAGGAAACCGCGGCGGCAGCGGCGGTAGCGGCGG
TGGCGGCGGCAACGATCCCTGCAGCATGATCAAAAGAGTCGGATGCGGCC
GGTGCGGAACGGTGAACCTGGTGAGCCGACGAACTCTTGTGTTTGTCTTT
GCGGCTGGCCTTCTCGGCGCCGCGCTCGTGCTCCTTCTCTCGGCCGGCGA
CCGCGACAGATCCTCTTCGCTCTCGTCGTCGTTGCCGTCGACCTCGGCAA
CGACGGGCTTCAAGGCCACGATCCCGTCGGGATCGCAGCAGCAGAGCGAT
CAGCAGGAGCTGCGAGGAGGCGGCGGCGGCGGCGGCGGCGACACCTCGCC
ATCATCAACGCCGGGAACAAGCGGAGGAATAGCGCAAGAAGAGGAGGAGG
GAGAGGGGGGCAACAAGCCCAAGATCACGGTGAAACAGGCGGAGGGCCGA
GGCGCTGGGGGGGGAAAGGTGTCCGTCTTCGTGTACGACGGCGTGCCCGA
GCTGGACCACTCGTGGCTGGTGCCGTGCTACCGACAAGTTCGCGATGGCG
TCTCCCCGTGGCAGGACGAGAGAGCGGACATGGCGCAGGACATGGGGGAA
ATATGGCTGCACCGCGCGATGCTCGCTCACCCGTGGAGAGTACTCAACCC
GGAGGAAGCCGACCTGTTCTACGTGCCCATGTATCCGGTGCTGAGCATGA
AGCTGGGTAACAACAGGTGCGGGCACAAGACGCACGACGAGCTCATCAAC
ACCTCCGTCGAGTACCTCGCCCTGTCCAGCGTCTACTTCCGCCGCTTCGG
CGGCGCCGACCACGCGCTTGTGTGCGCCTGGTGGAACTGCAGGGGGGCGC
TGGGACCGAAGCCCCGCATGCTGCTGCGCCGCACGGTGGTCGGTATCAAC
GAGAAGATGCTTGGGTGGACCAGGTGGGGGTGCGGGTTAGACAAGATGGT
CACCGTCCCCTACACGGCGAGCAGCGTCCTCACCACCAGCGAGATGATCG
GGGGGCGCGCGGCTGAGGACCGAGATATACCCTTCTTTTTCGTGGGCACG
GCGCGGAGTCGCCCGGAGCGCCAAAACTTGGACGTGGTGACGGGCATGGC
CGAGGGTAGTGTCATGATGCTCGGTAATCATCAATCGGACTGGGGCATGA
ACTCGACGCAGTACGCAGCACACATTGCCCGCAGCAGCAGGTTCTGCTTC
TGCCCCCGGGGGGACACGGAATCGAGCCGCCGCATCTTCGACGCCGTGGC
CGCGGGCTGCACGCCGATCGTGACGGAGGCTTCGGTAGCCGTCCTGCCGT
TCTCGGAGCATGTGCTCAACTACTCGGACTTTGCCGTGGTCGTGGATCCG
GACGCCTTCACCACGCGGGAGAGGGTGACGAAGGTCGTTCAAGATGCCCT
CTCGAGGTCGGAAGTGGAGGTGGAGCAGCTGCGGGAAGGCGGGAGAAGGG
GCATGAGCGCGCTCCTGTACGGAGTGACGATGGGCAAGGAGATAGGCGAC
ATGCGGCCCTTCCTCGGCACCGCTACGAAGTTCGTCCGAGCGAGCTACGC
GCTCGCGGGGGGAGGAGGGACTGAGGGCGAGGGCAGATCGGCAGACATGT
GGACCTGCAACCGGTATGATCCCATGAACGAGGAGATCGACACGGCTCCG
CGGACGACTGCGAAGCTACCCCCCCCCGCCGGCGCAACGCGACAGTGGCT
GGCCGAAACAGAGACAATCGTGAACGTGGAGCGGTCCCTGCTTTTCTGCG
CTCCCCCGAACACCGGGTCGTTGCAGTTTAGGATGCTCGCCAAACGGATG
CAGGGCCTCCCGCACTGGGCGGTGTCCAACGACCGGTCGCTGCTGTTCGA
CCGAAAAGCCTCGGGGCTCGAGCTGCTGGATGCAACGGACGGGCACCTGA
TGGAGAAGATCTACCGAGAGAACGGGTCCGGTTGGATCAAGATCGGTCTC
GTGCGTGACCCGGTCACCCGGTTGCTTTCGGCCTACCTCGACCTTGCCGA
CAGGTGGCGAGAGGCGCTGTCGCCACCGCGGGGGGCGGCGGATGATTCTG
CCCCCGAGCAGAGTTCCAACCACGATCGACGGCGGCTACGGCAGTCGCCA
GACGAGGGAGAGCCTACGGGCGAAGACAATGACCGACATCGCCAGCAAGG
GGGAAGCAGAGACCATGCACCGCTCACCGGAAGCGAGTGGGACTTGCTCG
ACGCTATCGTCGACAGGCGAAGGCGGCGGCGGCGGCGGCGACAGCGGGGA
CCGGGGCCCCGGCAAGAGGAGGAAAACGAGAGAATCGCTTACGAGGGGTT
GCACGACACCGGAAGAGGCGGTAGAAACGACGGCGGAGGCGTTTTTGGTG
GAGAGGGCGGCAGCGGGAGCCGCAACGAAGGAACCGACAATCAAGGGGGC
GCTAACGCCAGCGGTGGGAGGGGTGCGGACGGGCGATTACTGCAAGGCGA
GAGAAGACCCGACGCAGCAGACCAACGCGTCGAGGTTAACAACGACGACG
GCCGGGAGGTGTCGCCGGAGCACCACCCGCTACGACACCGCGAAATGGAG
GAGGGAGCAGAGAGGCGGTTCTTCTGGCAGGGTTCCGGGGGTTGGGACGG
CACCGGGGCGGCAGGCGAGGACGGCGGCGACAGGTCCGCCGTTGGCGGCG
GCGGCGGCGGCGGCGGCGACGGCGGCGGCGACGGCGATGGCGATGATATC
GGCGTCCCTACCTTCGTGGAGGTTGTGGAGACCCTCAAGGCGGACGTCTG
GGGCGGCCCCGTGGCGTTCCGGCCGGCAGTGAGCCTGTGCGGCCAGCGCA
ACTCTCCGTTCGACAGCGTTATCCCGTTCGAGAGGCTGCAG
back to top