prot_Ecto-sp13_S_contig1288.2370.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1288.2370.1
Unique Name	prot_Ecto-sp13_S_contig1288.2370.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	625

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1288.2370.1 vs. uniprot
Match: D7FSW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW7_ECTSI)

HSP 1 Score: 996 bits (2575), Expect = 0.000e+0
Identity = 559/627 (89.15%), Postives = 578/627 (92.19%), Query Frame = 0

Query:    1 VRDVEAQRAKDRENWASLEGENETKLRKHTHLLEDALRTERAENQRLRVARDNRRRSWDVPGGSGEQQPRAPPRRISSGEYEHVHQVGPRRVGSGSWGGLAREHHEQDRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETLAKQREENTTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEKCLQAAETRLLDAAAGCSPLVLPRPERARSPRASAGRVEAPARREAARVCRKPFGPAASEGCTPPGSPEGDGEKASGSSLPPSRGALGSTIASRGRSAAAVRRKEEGSSAGKGRSKSSPPRGRDAQTKSKRRPWGSSPPPSPPRGGSLLGKPTIASKLNPSRLRRSGDNEAEQKQPPPRRRPGELVGAVKREAAGSRVNGTESRGVQTGTTQDPSNFSVGPREADSAGESTRGGFTTVGRGGSTAPRVDETAEPRLEVASAGRDQGITPTVGGIAAAIRGVDLKATIARELRAAVATTPASAVSSENFNGXXXXXRTPAGGGAP---AGDRPREKALGELEEGDLLNEITRGSGKCAWADVIPDTVAGGLSSAANGGRALKSREVAELESDVQHIFQFFAAKDGRKRLGPSLSRANGAKEWETDFLEDIGETLS 624
            VRDVEAQRAKDRENWA L+GE+ETKL+KHTHLLEDALRTERAENQRLRVARDNRRRSWDVPGGSGEQQPRAPPRR SSGEYEHVHQVGPRRVGSGSWGGLAREHHEQDRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETLAKQREENTTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEK LQAAETRLLDA AGCSPLVLPRPERARSPRASAGRVEAPA REAARVCRKPFGPAA+EGCTPPGSP GDGE+ASGSSLPPSRGALGSTIASRGRSAAA RRKEEGSSAG        PRGRD +TK KRRPWGSSPPPSPPRGGSLLGKPT+ASKLNPSRLRR G+NEAEQKQPPPRRRPGE++GAVKRE+ GS  NGTESRGVQTGTTQDPS+ SVGPREADSAGES RGGFTTVGRGGSTAP VDETAEPR+E ASAGRD GITPTVGGIAAAIRGVDLKATIARELRAAVATTPASAVSSENFNGXXXXX             GDR  EKALGEL+ GDLL+EITRGSGKCAW D+IPDTVAGGLSSAAN GR LKSREVAELESDVQHIFQFFAAKDGRKR G  LS+ANGAKE ETDFLE+IG+TLS
Sbjct:  137 VRDVEAQRAKDRENWAMLDGESETKLKKHTHLLEDALRTERAENQRLRVARDNRRRSWDVPGGSGEQQPRAPPRRRSSGEYEHVHQVGPRRVGSGSWGGLAREHHEQDRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETLAKQREENTTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEKRLQAAETRLLDATAGCSPLVLPRPERARSPRASAGRVEAPALREAARVCRKPFGPAAAEGCTPPGSPNGDGERASGSSLPPSRGALGSTIASRGRSAAAARRKEEGSSAGXXXXXXXXPRGRDTETKGKRRPWGSSPPPSPPRGGSLLGKPTVASKLNPSRLRRPGENEAEQKQPPPRRRPGEVIGAVKRESTGSPGNGTESRGVQTGTTQDPSDCSVGPREADSAGESRRGGFTTVGRGGSTAPHVDETAEPRIEAASAGRDLGITPTVGGIAAAIRGVDLKATIARELRAAVATTPASAVSSENFNGXXXXXXXXXXXXXXXXXGGDRQLEKALGELDGGDLLHEITRGSGKCAWTDLIPDTVAGGLSSAANSGRVLKSREVAELESDVQHIFQFFAAKDGRKRSGSLLSKANGAKEGETDFLEEIGKTLS 763

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BLAST of mRNA_Ecto-sp13_S_contig1288.2370.1 vs. uniprot
Match: A0A6H5L8A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8A2_9PHAE)

HSP 1 Score: 964 bits (2492), Expect = 0.000e+0
Identity = 545/625 (87.20%), Postives = 559/625 (89.44%), Query Frame = 0

Query:    1 VRDVEAQRAKDRENWASLEGENETKLRKHTHLLEDALRTERAENQRLRVARDNRRRSWDVPGGSGEQQPRAPPRRISSGEYEHVHQVGPRRVGSGSWGGLAREHHEQDRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETLAKQREENTTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEKCLQAAETRLLDAAAGCSPLVLPRPERARSPRASAGRVEAPARREAARVCRKPFGPAASEGCTPPGSPEGDGEKASGSSLPPSRGALGSTIASRGRSAAAVRRKEEGSSAGKGRSKSSPPRGRDAQTKSKRRPWGSSPPPSPPRGGSLLGKPTIASKLNPSRLRRSGDNEAEQKQPPPRRRPGELVGAVKREAAGSRVNGTESRGVQTGTTQDPSNFSVGPREADSAGESTRGGFTTVGRGGSTAPRVDETAEPRLEVASAGRDQGITPTVGGIAAAIRGVDLKATIARELRAAVATTPASAVSSENFNGXXXXX-RTPAGGGAPAG-DRPREKALGELEEGDLLNEITRGSGKCAWADVIPDTVAGGLSSAANGGRALKSREVAELESDVQHIFQFFAAKDGRKRLGPSLSRANGAKEWETDFLEDIGETL 623
            VRDVEAQRAKDRENWASLEGE+ETKLRKHTHLLEDALR ERAENQRLR ARDNRRRSWDVPGGSGEQQPRA PRR SSGEYEHV QVGPRRVG+GSWGGLAREHHE DRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETL KQREENTTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEKCLQAAETRLLDA AGCSPLVLPRPERARSPRASAGRVEAPARREAARVCRKPFGP A EGCTPPGSP+G  EKASGSSLPPSRGALGSTIASRGRSAAA RRK+E                       KRRPWGSSPPPSPPRGGS LGKP I SKLNPSRLRR GDNEAEQK+ PPRRRPGEL+GA KREAAGSR NGTESRGVQTGTTQ+PS+FSVGPREADSAGES RG FTTV   GSTAPRVD+TA+PR+E ASAGRDQGITP  GGIAAAIRGVDLKATIARELRAAVATTPASAVSSENFNG      RTPAGG APAG DR REKALGEL+EGDLLNEI+RGSGKCAWA +IPDTVAGGLSSAANGGRALKSREVAELESDVQHIFQFFAAKDGRK  G  LSRANGAKE ETDFLEDIGETL
Sbjct:  185 VRDVEAQRAKDRENWASLEGESETKLRKHTHLLEDALRAERAENQRLRAARDNRRRSWDVPGGSGEQQPRASPRRRSSGEYEHVDQVGPRRVGNGSWGGLAREHHEHDRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETLVKQREENTTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEKCLQAAETRLLDATAGCSPLVLPRPERARSPRASAGRVEAPARREAARVCRKPFGPPAVEGCTPPGSPKGGSEKASGSSLPPSRGALGSTIASRGRSAAAARRKDEXXXXXXXXXXXXXXXXXXXXXXXKRRPWGSSPPPSPPRGGSFLGKPAIGSKLNPSRLRRPGDNEAEQKRTPPRRRPGELIGAAKREAAGSRGNGTESRGVQTGTTQNPSDFSVGPREADSAGESRRGVFTTVEWRGSTAPRVDKTAKPRIEAASAGRDQGITPMAGGIAAAIRGVDLKATIARELRAAVATTPASAVSSENFNGGDGGGQRTPAGGSAPAGGDRQREKALGELDEGDLLNEISRGSGKCAWAALIPDTVAGGLSSAANGGRALKSREVAELESDVQHIFQFFAAKDGRKGSGSLLSRANGAKEGETDFLEDIGETL 809

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1288.2370.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1288.2370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FSW7_ECTSI	0.000e+0	89.15	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L8A2_9PHAE	0.000e+0	87.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 165..185
None	No IPR available	COILS	Coil	Coil	coord: 129..149

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1288	contig	Ecto-sp13_S_contig1288:14519..17814 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1288.2370.1	mRNA_Ecto-sp13_S_contig1288.2370.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1288 14519..17814 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1288.2370.1 ID=prot_Ecto-sp13_S_contig1288.2370.1|Name=mRNA_Ecto-sp13_S_contig1288.2370.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=625bp
VRDVEAQRAKDRENWASLEGENETKLRKHTHLLEDALRTERAENQRLRVA
RDNRRRSWDVPGGSGEQQPRAPPRRISSGEYEHVHQVGPRRVGSGSWGGL
AREHHEQDRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETLAKQREEN
TTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEKCLQAAE
TRLLDAAAGCSPLVLPRPERARSPRASAGRVEAPARREAARVCRKPFGPA
ASEGCTPPGSPEGDGEKASGSSLPPSRGALGSTIASRGRSAAAVRRKEEG
SSAGKGRSKSSPPRGRDAQTKSKRRPWGSSPPPSPPRGGSLLGKPTIASK
LNPSRLRRSGDNEAEQKQPPPRRRPGELVGAVKREAAGSRVNGTESRGVQ
TGTTQDPSNFSVGPREADSAGESTRGGFTTVGRGGSTAPRVDETAEPRLE
VASAGRDQGITPTVGGIAAAIRGVDLKATIARELRAAVATTPASAVSSEN
FNGGGGGQRTPAGGGAPAGDRPREKALGELEEGDLLNEITRGSGKCAWAD
VIPDTVAGGLSSAANGGRALKSREVAELESDVQHIFQFFAAKDGRKRLGP
SLSRANGAKEWETDFLEDIGETLS*