prot_Ecto-sp13_S_contig1287.2363.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1287.2363.1
Unique Nameprot_Ecto-sp13_S_contig1287.2363.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length914
Homology
BLAST of mRNA_Ecto-sp13_S_contig1287.2363.1 vs. uniprot
Match: A0A6H5JA01_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA01_9PHAE)

HSP 1 Score: 640 bits (1650), Expect = 2.340e-213
Identity = 719/950 (75.68%), Postives = 721/950 (75.89%), Query Frame = 0
Query:   13 MPSPAARLAVLSLLAGGTYCDAACPSGTRASHGHDSTAGFVSHVPVTASFNPFSRVRKAAKRAIPGTRPESDAKTLGQALPGGRPLLSLTPVKAEGSDGAPAPPAPNAAGKEGAALPPPAGSSAAPGEAPPAGGSIKEAISAFSKGEIAKSDLEKLVKEKEAVELKAAEQRQAETLRQAAQAKSQVAAKEKMDALMVAGATATVGLVAGGLGDGAFAGGDAPWAPPVGAVALGGLGYAAATTDGAVGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETVASIKAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXADAKVKELTAIPNKVIGDAVSKVEAVLPTPPAPKPAAPKPPXXXXXXXXXXXXXXXXXXXPXXXXXSTAPSSPVEPSPXXXXXXXXXXXXXPAPKPAAKKXXXXXXXXXXXXXXXXXXXXXXAKFTAKSVAAPAPQKXXXXXXXXXXXXXXXXXXXXXXXXXLSAPLRTKSGVKATSAPVAXAATSPAKKAPAAXXXXXXXXXXXAAPSSPFGGLFGGNGGN-------------PAKAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEKKKXXXXXXXP--------------------------------AAAVKKAPMLSAPLRSASKSAAAKPAPKAAPKKAAXXXXXXXXXXXXAAAKKPAPAASGGGXXMFGMFGGXXXXSKAATGPXXXXXXX----KGATAATFFKPALVKQLSKKMNEDQLKKLDAMTAKYANSGSPTAYVNSAAQLVGKGVISDILPDLVGSLPQGKQKSDLFTVYSTY 913
            MP PAARLAVLSLLAGGTYCDAACPSGTRAS GHDS A FVSHVPVTASFNPFSRVRKA KRAIPGTRPESD  TLGQALPGGRPLLSLTPVKAEGSDGAP PPAP                   PGEAPPAGGSIKEAISAFSKGEIAKSDLEKLVKEKEAVEL+AAEQRQAETLRQAAQAK+QVAAKEKMDALMVAGATATVGLVAGGLGDGAFAGGDAPWAPPVGAVALGGLGYAAATTDG VGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETVASIKAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX    VKELTAIPNKVIGDAVSKVEAVLPTPPAPKPAAPK                XXXXX XXX    A S       XXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXXXLSAPLRTKSGVKATSAPVA             XXXXXXXXXXX  PSSPFGGLFGGN                PAK A P  XX       XXXXX         XX XXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               A   K X     P                                AAAVKKAPMLSAPLRSASK A   PAPKAAPK   X       XXXXAAAKKPAPAASGG XXMFGMFGG    SKAAT P           KGA A TFFKPALVKQLSKKMNEDQLKKLDAMTAKYANSGSPTAYVNSAAQLVGKGVISDILPDLVGSLPQGKQKSDLFTVYSTY
Sbjct:    1 MPGPAARLAVLSLLAGGTYCDAACPSGTRASPGHDSAAAFVSHVPVTASFNPFSRVRKAGKRAIPGTRPESDETTLGQALPGGRPLLSLTPVKAEGSDGAPPPPAPXXXXXXXXXXXXXXXXXXXPGEAPPAGGSIKEAISAFSKGEIAKSDLEKLVKEKEAVELEAAEQRQAETLRQAAQAKAQVAAKEKMDALMVAGATATVGLVAGGLGDGAFAGGDAPWAPPVGAVALGGLGYAAATTDGVVGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETVASIKAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVKELTAIPNKVIGDAVSKVEAVLPTPPAPKPAAPK---------------AXXXXXXXXXSKPAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAPLRTKSGVKATSAPVAAXXXXXXXXXXXXXXXXXXXXXXXXXPSSPFGGLFGGNXXXXXXXXXPKPTVAAPAKKAPPASXXSTASKAKXXXXXPSSPFGGLFXXNXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGNGAKPAAPKPAAAAPAKEXPAPAAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXATPPAAAVKKAPMLSAPLRSASKPAXXXPAPKAAPKXXXXAPRVVAKXXXXAAAKKPAPAASGGXXXMFGMFGGGGE-SKAATSPAPAGRKAPAPAKGAAATTFFKPALVKQLSKKMNEDQLKKLDAMTAKYANSGSPTAYVNSAAQLVGKGVISDILPDLVGSLPQGKQKSDLFTVYSTY 934          
BLAST of mRNA_Ecto-sp13_S_contig1287.2363.1 vs. uniprot
Match: A0A6U4HT34_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HT34_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 6.710e-9
Identity = 61/167 (36.53%), Postives = 87/167 (52.10%), Query Frame = 0
Query:  143 PAGGSIKEAISAFSKGEIAKSDLEKLVKEKEAVELKAAEQRQAETLRQAAQAKSQVAAKEKMD--ALMVAGATATVGLVAGGLGDGAFAGGDAPWAPPVGAVALGGLGYAAATTDGAVGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETVASIKAVP 307
            PA   + E +   + G+I+  D EK + EKEA    AAE+ +A         K+++A K+++D  A+  A + AT+GLV GGL DGA A GDAPWAP  G    G   YA A  D  VGE  R   GG       ++  AA+   +   ++A  + D+  A IK +P
Sbjct:   42 PAEEEVPELVEDLTAGKISTEDFEKALVEKEAA--MAAEKAKALE-------KTRIARKKELDTEAIYAAASGATIGLVTGGLLDGALANGDAPWAPVAGLAVGGAALYAGARLDNKVGEVLRFSFGGLAQGTQKAVTGAATDFSEGVTAAAKSQADKIQADIKGIP 199          
BLAST of mRNA_Ecto-sp13_S_contig1287.2363.1 vs. uniprot
Match: A0A7R9YG73_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG73_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.130e-8
Identity = 52/122 (42.62%), Postives = 67/122 (54.92%), Query Frame = 0
Query:  189 RQAAQAKSQVAAKE---KMDALMVAGATATVGLVAGGLGDGAFAGGDAPWAPPVGAVALGGLGYAAATTDGAVGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETVASIKAVP 307
            R AA+ K++ AAK+   + +A  VA + AT+GLVAGGL DGA A GDAPWAP VG    GGL YA    D  +GE  R   GG      A++  AA    D     A  +V+    SI++ P
Sbjct:   76 RLAAKKKTEAAAKKAELRKEAAYVAASGATIGLVAGGLLDGALANGDAPWAPIVGLGVGGGLLYAGGNLDNKLGEVLRFSFGGLAQGTQAAVTNAAKGTADAVVQGAKAQVENAKTSIQSAP 197          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1287.2363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JA01_9PHAE2.340e-21375.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U4HT34_9STRA6.710e-936.53Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9YG73_9STRA1.130e-842.62Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..197
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 495..511
score: 38.82
coord: 457..469
score: 36.92
coord: 435..451
score: 50.59
coord: 513..530
score: 31.11
coord: 474..495
score: 27.27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1287contigEcto-sp13_S_contig1287:4613..13866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1287.2363.1mRNA_Ecto-sp13_S_contig1287.2363.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1287 4613..13866 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1287.2363.1 ID=prot_Ecto-sp13_S_contig1287.2363.1|Name=mRNA_Ecto-sp13_S_contig1287.2363.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=914bp
MLEGCPPDILSRMPSPAARLAVLSLLAGGTYCDAACPSGTRASHGHDSTA
GFVSHVPVTASFNPFSRVRKAAKRAIPGTRPESDAKTLGQALPGGRPLLS
LTPVKAEGSDGAPAPPAPNAAGKEGAALPPPAGSSAAPGEAPPAGGSIKE
AISAFSKGEIAKSDLEKLVKEKEAVELKAAEQRQAETLRQAAQAKSQVAA
KEKMDALMVAGATATVGLVAGGLGDGAFAGGDAPWAPPVGAVALGGLGYA
AATTDGAVGENTRRVIGGFVAWLLASLKEAASSAVDNAKSSATKKVDETV
ASIKAVPDNAQAAAKQKADDLVAYIKSIPDTIAGAAKAAVKSAQEDAKAK
ADSIIADIKAAPKNLQKEATKAGEAALGELKKVPDKVTDAATEAATSAAD
TAKKTADAKVKELTAIPNKVIGDAVSKVEAVLPTPPAPKPAAPKPPAAPK
PPATSKPAAASKPAVPKPPAVSTAPSSPVEPSPSPPPPAAVKTSPKPAPK
PAAKKPAAKKPAAKKPAAKKPAPTKPAAKFTAKSVAAPAPQKKAAAAAPP
APAAPPAAAAPAKKMPPLSAPLRTKSGVKATSAPVAAAATSPAKKAPAAA
AAPPAAATKKAAPSSPFGGLFGGNGGNPAKAAAPKATAAAPAKKAPPASP
PSAASKAKAKAPSSPFGGLFGGNGGNGAKPAAPKPAAAAPAKKAPPASPP
SAASKAKAKAPSSPFGGLFGGNGNGGGAEKKKEASPATPPAAAVKKAPML
SAPLRSASKSAAAKPAPKAAPKKAAPAPKVAAKKAAPAAAKKPAPAASGG
GGGMFGMFGGGGGESKAATGPAPAPAPAKGATAATFFKPALVKQLSKKMN
EDQLKKLDAMTAKYANSGSPTAYVNSAAQLVGKGVISDILPDLVGSLPQG
KQKSDLFTVYSTY*
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