prot_Ecto-sp13_S_contig12866.2362.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12866.2362.1
Unique Nameprot_Ecto-sp13_S_contig12866.2362.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
BLAST of mRNA_Ecto-sp13_S_contig12866.2362.1 vs. uniprot
Match: D8LG48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG48_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 3.370e-88
Identity = 139/146 (95.21%), Postives = 140/146 (95.89%), Query Frame = 0
Query:    1 MDTAMAIEPIVGGGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISETVTLAALILWKEDIFFVDGGYDNFDAQEDRGAYSSSAYAYDGATFGTGGMGXXXXXXXXXXXXXDDDGVPQQADL 146
            MDTAMAIEPIVGGGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISE VTLAALILWKED+FFVDGGYDNFDAQEDRGAYSSSAYAYDGATFGTGGMG   XXXXXXXX  DDDGVPQQADL
Sbjct:   78 MDTAMAIEPIVGGGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISEAVTLAALILWKEDMFFVDGGYDNFDAQEDRGAYSSSAYAYDGATFGTGGMGGGLXXXXXXXXNGDDDGVPQQADL 223          
BLAST of mRNA_Ecto-sp13_S_contig12866.2362.1 vs. uniprot
Match: A0A7S1TNM9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNM9_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.230e-17
Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = 0
Query:   13 GGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISETVTLAALILWKEDIFFVDGGYDNFDAQED-----RGAYSSSAYA-YDGATF 116
            G +IG++TMM FL LMTAV+WGQ+SGCED  DD D YSC N     A    +  L + +      L+LW++D      GYD+            GA  ++AYA YD +T+
Sbjct:   72 GFVIGVSTMMSFLMLMTAVFWGQLSGCEDVKDDPDQYSCDNKKAYGATCAMSVLLFLLDVSFTILLVLWRDDFMSESSGYDDIGGNSAFVNNAPGAADANAYAAYDSSTY 181          
BLAST of mRNA_Ecto-sp13_S_contig12866.2362.1 vs. uniprot
Match: A0A7R9YCB5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCB5_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 6.380e-16
Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 0
Query:   13 GGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISETVTLAALILWKEDIFFVDGGYDNFDAQ----EDRGAYSSSAYAYDGATF 116
            G +IG+ TMM  L  MTA++WGQ+SGCE   +DVD Y+C N     A   F+  L + +T     L+LW++D       Y++  +     +  GA  +S  AYD +T+
Sbjct:   26 GFVIGVATMMSLLMFMTAIFWGQLSGCEKVDEDVDQYTCDNKKAYGATCAFSVLLFLLDTAFTILLVLWRDDFMGETAAYEDIGSSPFVNDQPGAEGNSYAAYDSSTY 133          
BLAST of mRNA_Ecto-sp13_S_contig12866.2362.1 vs. uniprot
Match: A0A7R9U994_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U994_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.030e-15
Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 0
Query:   13 GGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISETVTLAALILWKEDIFFVDGGYDNFDAQ----EDRGAYSSSAYAYDGATF 116
            G +IG+ TMM  L  MTA++WGQ+SGCE   +DVD Y+C N     A   F+  L + +T     L+LW++D       Y++  +     +  GA  +S  AYD +T+
Sbjct:   99 GFVIGVATMMSLLMFMTAIFWGQLSGCEKVDEDVDQYTCDNKKAYGATCAFSVLLFLLDTAFTILLVLWRDDFMGETAAYEDIGSSPFVNDQPGAEGNSYAAYDSSTY 206          
BLAST of mRNA_Ecto-sp13_S_contig12866.2362.1 vs. uniprot
Match: W7TS32_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS32_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.380e-14
Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 0
Query:    9 PIVGGGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISETVTLAALILWKEDIFFVDGGYDNFDAQEDRGAYSSSAYAYDGATFGT 118
            P+  G ++G++ M+ FLSLMTA++WGQ++ C     D+  YSC N    +A   FA+ L + + V  +AL+LW+++       YD  D     GA SSSA    G   GT
Sbjct:   68 PLAVGFVLGVSVMITFLSLMTAIFWGQLANCSPGYYDIKRYSCTNRSAYSATCAFATLLFLVQLVFTSALVLWRDEFIQDSSAYD--DIHGAGGASSSSAAGLPGYEGGT 175          
BLAST of mRNA_Ecto-sp13_S_contig12866.2362.1 vs. uniprot
Match: D7FPE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPE0_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.470e-10
Identity = 36/90 (40.00%), Postives = 53/90 (58.89%), Query Frame = 0
Query:   13 GGLIGITTMMCFLSLMTAVYWGQMSGCEDDTD-DVDGYSCYNSFGMAAVAWFASFLLISETVTLAALI-----LWKEDIFFVDGGYDNFD 96
            G LIG+T ++  ++LMTA+YWGQ++GC+ D D D D YSC N   M  VA FAS + + +   +  L+     L +ED     G Y ++D
Sbjct:   89 GFLIGVTLVLNVITLMTAIYWGQLAGCDSDYDGDYDQYSCSNKSAMRGVAAFASIIWVLQLPFIYLLVQRRGVLTREDYATSGGRYADYD 178          
BLAST of mRNA_Ecto-sp13_S_contig12866.2362.1 vs. uniprot
Match: A0A7S2S6Q8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6Q8_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.450e-7
Identity = 27/72 (37.50%), Postives = 41/72 (56.94%), Query Frame = 0
Query:   13 GGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISETVTLAALILWKED 84
            G L+G++    +LSL TA++WGQ++ C+     +  YSC N     AV  FA+ L I +    A L +WK+D
Sbjct:   83 GFLLGLSGATAWLSLQTAIFWGQLADCDRHAHHLSQYSCSNVSAYKAVCAFAALLFILQGGLFAVLAVWKDD 154          
BLAST of mRNA_Ecto-sp13_S_contig12866.2362.1 vs. uniprot
Match: A0A7S2KR05_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KR05_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.890e-5
Identity = 29/74 (39.19%), Postives = 40/74 (54.05%), Query Frame = 0
Query:    9 PIVGGGLIGITTMMCFLSLMTAVYWGQMSGCED--DTDDVDGYSCYNSFGMAAVAWFASFLLISETVTLAALIL 80
            PI  G  IG +  M  L L+TAVYWG+MSGCE   +   +D Y C +   M   A  A+ L ++E V    L++
Sbjct:  108 PIAYGIWIGTSLTMTVLYLITAVYWGEMSGCEKLPEGTTIDQYECDDKNAMECAAGIATLLFLTEIVLTGVLVV 181          
BLAST of mRNA_Ecto-sp13_S_contig12866.2362.1 vs. uniprot
Match: A0A482SCT2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCT2_9ARCH)

HSP 1 Score: 51.2 bits (121), Expect = 5.640e-5
Identity = 23/73 (31.51%), Postives = 42/73 (57.53%), Query Frame = 0
Query:   13 GGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISETVTLAALILWKEDI 85
            G ++G + M+ F++L +A++WGQ S C  ++       CYN   M +   F+ FL ++    +AA+I +K D+
Sbjct:   77 GIVLGCSVMLIFMTLQSAIFWGQYSDCTPNSLLNSVTQCYNPAAMKSCCTFSVFLFLTYIAQVAAMIRYKNDV 149          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12866.2362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LG48_ECTSI3.370e-8895.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1TNM9_9STRA2.230e-1740.91Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9YCB5_9STRA6.380e-1636.11Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9U994_9STRA3.030e-1536.11Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TS32_9STRA1.380e-1437.27Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
D7FPE0_ECTSI1.470e-1040.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2S6Q8_9STRA2.450e-737.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2KR05_9STRA2.890e-539.19Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A482SCT2_9ARCH5.640e-531.51Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..146
NoneNo IPR availableTMHMMTMhelixcoord: 59..81
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12866contigEcto-sp13_S_contig12866:2942..4765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12866.2362.1mRNA_Ecto-sp13_S_contig12866.2362.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12866 2942..4777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12866.2362.1 ID=prot_Ecto-sp13_S_contig12866.2362.1|Name=mRNA_Ecto-sp13_S_contig12866.2362.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
MDTAMAIEPIVGGGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYS
CYNSFGMAAVAWFASFLLISETVTLAALILWKEDIFFVDGGYDNFDAQED
RGAYSSSAYAYDGATFGTGGMGGGLGGGGGVGGDGDDDGVPQQADL*
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