prot_Ecto-sp13_S_contig12863.2361.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12863.2361.1
Unique Nameprot_Ecto-sp13_S_contig12863.2361.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length125
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12863.2361.1 vs. uniprot
Match: D8LDQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ7_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 1.490e-37
Identity = 89/145 (61.38%), Postives = 92/145 (63.45%), Query Frame = 0 
Query:    1 MGLVAGGASMGGDNGGDASMGQAAXXXXAAGLDALYAEDVDMGEAMPWSFAPDSSGFAVGAASNALSAQDLSAPAXXXXXXXXXXXXXXXXXXXXXXXSSQSSA---------------------TAPAWGMDSPSLFSPEKWTA 124
            MGLV+GGASMGGDNGGDASMGQAA    AAGLDALYAEDVDMGEAMPWSFAPDS+GFA GAASNA SAQDLSAPA                    XXX    +                      TAPAWGMDSPS FSPEKWTA
Sbjct:    1 MGLVSGGASMGGDNGGDASMGQAA----AAGLDALYAEDVDMGEAMPWSFAPDSNGFAGGAASNAPSAQDLSAPATASRSTPTGPVASLVLSAPAXXXXXXXATAESNDAXXXXXXXXXXXXXXXTAPAWGMDSPSPFSPEKWTA 141
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BLAST of mRNA_Ecto-sp13_S_contig12863.2361.1 vs. uniprot
Match: A0A6H5L6G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G4_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 2.220e-37
Identity = 92/144 (63.89%), Postives = 93/144 (64.58%), Query Frame = 0 
Query:    1 MGLVAGGASMGGDNGGDASMGQAAXXXXAAGLDALYAEDVDMGEAMPWSFAPDSSGFAVGAASNALSAQDLSAP--------------------AXXXXXXXXXXXXXXXXXXXXXXXSSQSSATAPAWGMDSPSLFSPEKWTA 124
            MGLVAG ASMGGDNGGDASMGQAA    AAGLDALYAEDVDMGEAMPWSFAPDSSGFAVGAASNA SAQDLSAP                    A                       S+QSS TAPAWGMDSPSLFS EKWTA
Sbjct:  860 MGLVAGSASMGGDNGGDASMGQAAAA--AAGLDALYAEDVDMGEAMPWSFAPDSSGFAVGAASNAPSAQDLSAPIMALRSAPTGPVASLVLSAPAAAAGATPATGEPNDASPNTGASASTQSSGTAPAWGMDSPSLFSAEKWTA 1001
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12863.2361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDQ7_ECTSI1.490e-3761.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6G4_9PHAE2.220e-3763.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12863contigEcto-sp13_S_contig12863:286..1874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12863.2361.1mRNA_Ecto-sp13_S_contig12863.2361.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12863 266..1874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12863.2361.1 ID=prot_Ecto-sp13_S_contig12863.2361.1|Name=mRNA_Ecto-sp13_S_contig12863.2361.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
MGLVAGGASMGGDNGGDASMGQAAAAAAAAGLDALYAEDVDMGEAMPWSF
APDSSGFAVGAASNALSAQDLSAPAAAAGATPATAEPNDASSNTGASASS
QSSATAPAWGMDSPSLFSPEKWTA*
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