prot_Ecto-sp13_S_contig12860.2360.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12860.2360.1
Unique Nameprot_Ecto-sp13_S_contig12860.2360.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length153
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12860.2360.1 vs. uniprot
Match: D7FVV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV3_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 2.880e-69
Identity = 138/153 (90.20%), Postives = 141/153 (92.16%), Query Frame = 0 
Query:    1 MNMLRFLPGKKRPLQQQGTAAAG-GRLCTAAAGAPGNYEQAPGAPAAMTLEQQLRLPPNQREARXXXXXXXXXXXXXXXXERQHTIDLQRSSRGLSNADEMALVQQRELRMQRNLSLPERHPRSSSSSLEYGATDHEEEEDDGERSDRSDSIE 152
            MNMLRFLPGKKRPLQQQGTAAA  GRLCTAAAG  GN+EQ PGAPAAMTLEQQLRL PNQ EAR   XXXXXXXXXXXX ERQHTIDLQRSSRGLSNADEMALVQQRELRMQRNLSLPERHPRSSSSS+EYG TDHEE+EDDGERSDRSDSIE
Sbjct:    1 MNMLRFLPGKKRPLQQQGTAAAAVGRLCTAAAGTAGNHEQVPGAPAAMTLEQQLRLTPNQTEAREDGXXXXXXXXXXXX-ERQHTIDLQRSSRGLSNADEMALVQQRELRMQRNLSLPERHPRSSSSSVEYGVTDHEEDEDDGERSDRSDSIE 152
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BLAST of mRNA_Ecto-sp13_S_contig12860.2360.1 vs. uniprot
Match: A0A6H5KWG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWG8_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.440e-62
Identity = 127/152 (83.55%), Postives = 131/152 (86.18%), Query Frame = 0 
Query:    1 MNMLRFLPGKKRPLQQQGTAAAGGRLCTAAAGAPGNYEQAPGAPAAMTLEQQLRLPPNQREARXXXXXXXXXXXXXXXXERQHTIDLQRSSRGLSNADEMALVQQRELRMQRNLSLPERHPRSSSSSLEYGATDHEEEEDDGERSDRSDSIE 152
            MNMLRFLPGKKRPLQQQ T A          GAPGN+EQA GAPAAMTLEQQLRLPPNQ EAR    XXXXXXXXXXX ERQHTIDLQRSSRGLSNADEMALVQQRELR+QRNLSLPERHPRSSSSS EYG TDHEE++DDGERSDRSDSIE
Sbjct:    1 MNMLRFLPGKKRPLQQQRTPA----------GAPGNHEQAQGAPAAMTLEQQLRLPPNQTEAREDGDXXXXXXXXXXXEERQHTIDLQRSSRGLSNADEMALVQQRELRIQRNLSLPERHPRSSSSSQEYGVTDHEEDDDDGERSDRSDSIE 142
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12860.2360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVV3_ECTSI2.880e-6990.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWG8_9PHAE1.440e-6283.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12860contigEcto-sp13_S_contig12860:3484..3942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12860.2360.1mRNA_Ecto-sp13_S_contig12860.2360.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12860 3471..3942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12860.2360.1 ID=prot_Ecto-sp13_S_contig12860.2360.1|Name=mRNA_Ecto-sp13_S_contig12860.2360.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=153bp
MNMLRFLPGKKRPLQQQGTAAAGGRLCTAAAGAPGNYEQAPGAPAAMTLE
QQLRLPPNQREAREDREEGEEEEEEEIREERQHTIDLQRSSRGLSNADEM
ALVQQRELRMQRNLSLPERHPRSSSSSLEYGATDHEEEEDDGERSDRSDS
IE*
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