prot_Ecto-sp13_S_contig12852.2353.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12852.2353.1
Unique Nameprot_Ecto-sp13_S_contig12852.2353.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1032
Homology
BLAST of mRNA_Ecto-sp13_S_contig12852.2353.1 vs. uniprot
Match: A0A6H5KKD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD4_9PHAE)

HSP 1 Score: 846 bits (2185), Expect = 1.160e-277
Identity = 705/1140 (61.84%), Postives = 725/1140 (63.60%), Query Frame = 0
Query:    1 TLSSRAPRSPSSPGRYATDSYSSRRSSGSGDKENGEQKRGSPEEGGDGFLVPPGTHQFGGXXXXXXXXXDGWRFRSGLGVTRGEAGETRLGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAPGGADAVSWDRELARTLWREGPAAPGWTSRWRQPAMPGSRAALGLWERAGGLD---GDEAGVVERAGGVSPAGGTADTAQEVTEWARRIQASIENMNRLVDGFQLAGGGSSS-SRSEAAGTVTSPDSSMSGVPXXXXXXXXXXXXXXXXASHATVSWSRGSRGVERAVVGAAAXXXXXXXXXXXXXSLSAYGLEGFASAQLGFRRGLEG--------------------------------------------------------------------------VDGRPSTAEHRSADRSHEEKQKGEDESSGGWEEAKRDGAVRWEAGDGIVGASGXXXXXX-----IKPFVRSSLSSSSASSVLGRADAVLAEAARGIGXXXXXXXXXXXXXXXXXXXXXXXXNSLGPDLEAEIASLEALAESLQQRKMRFEPKPALLVQQQQELEEHRRAIRATSVAGSSSSSLHPSASDHTNSS--------------------------SSHLSSGHNNSXXXGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNDNNNILLLPSKGSEGVDGTYEVRRSVATDADSNAGADSALAALEAFQAELEARERDATAGGEGRSTPPVPPWAPGQGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGNRGDGEHSSEGSQDFRLRTSDEWGHGLHDDDAGRPRTPRPPLDSSPSXXXXXXTTPESDSGLIERLLSLDTEAIRKHAAAIAAGGDGCGSSSRGPSFSSLYGGAAAGGYADGRDAAPVXXXXXXXXXXXIELRDTDERPPFGRPSEAAVDDDHHLAGFSLPRAAEAEGEGGTKGYNLQQXXXXXXXXXXXXXHEEEGLRDTGVDAGDGXXXXXXXXXXXXXXXXXXXXGSDHSGSFNAGAGPGSXXXXXXEWWRRGADGRYSESGTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXTRREGERSRETAVDAGDGRGGGAGPA 1031
            TLSSRAPRSPSSP  YATDSYSS RSSGSGDKEN EQKRGS EEGGDGFLVPPGTHQFGGXXX       GWRF SG GV  G AG+ RLGAG        XXXXXXXXXXXXXXXXX                  VVAPGGADAVSWDRELARTL REGPA PGWTSRWRQPAMPGSRAALGLWE AGGLD    DEAGVVE AG VSP  G ADTAQEVTEWARRIQASIENMNRLVDGFQLAG GSSS SRSEAAGTVTSPDSSMSGVP                ASHATVS SRGSRGVERAVVGAA XXXXXXXXXXXXXSLSAYG EGFASAQ GFRRGLEG                                                                          VDGRPSTAEH SAD SHE               AK DGAVRW+          XXXXXX     IKPFVRSSLSSSSASSV+GRADAVLAEAARGIG XXXXXXXXXXXXXXXXXXXXXXX  LGPDLEAEIASLEALAESLQQRKMRFEPKPALLVQQQQELEEHRRAIRATSVAGS SS+  PSASDHTN                            SS LSSGH NS                                                       +N++NNILLLPS+G+EGVDG++EVRRSVATD DSNAGADSALAALEAFQAELEARE++ATAGGEGRS PPVPP APGQGTPXXX                         GG  GD                 EWGHG+HDDDAGRPRTPRP       XXXXXX TPESD+GLIERLLSLDTEAIRKHAAA+AAGGDGCGSSSRGPSF S +GGAA GGYADGRDAAP            +ELRDTDERPPFGRPSEAAVDDDHH A FS+PRAAEAEG G T   N QQ              EEEG RD GVDAGDG                    GSDHS SFNAGAGPGS  XXXX     GADGRYS          XXXXXXXXXXXXXXXXXXXXXX TR E E  R+ AVDAGDGR GGAGPA
Sbjct:  238 TLSSRAPRSPSSPDHYATDSYSSWRSSGSGDKENEEQKRGSSEEGGDGFLVPPGTHQFGGXXX-------GWRFGSGPGVAGGRAGQIRLGAGSGGSAGTSXXXXXXXXXXXXXXXXXGAS---------------VVAPGGADAVSWDRELARTLSREGPAVPGWTSRWRQPAMPGSRAALGLWEGAGGLDVVERDEAGVVEIAGSVSPGDGAADTAQEVTEWARRIQASIENMNRLVDGFQLAGDGSSSTSRSEAAGTVTSPDSSMSGVPRRDDGDALYSGVTADSASHATVSRSRGSRGVERAVVGAA-XXXXXXXXXXXXXSLSAYGFEGFASAQQGFRRGLEGLVKSGVGGGGGASQTGFSSSRAGFGSGSATCTLPPGEPAAXXXXXXXGGSDVGGTSASGVGRTSRSFSPPALEGVDGRPSTAEHHSADGSHEXXXXXXXXXXXXXXXAKGDGAVRWKGXXXXXXXXXXXXXXXXXXXXIKPFVRSSLSSSSASSVMGRADAVLAEAARGIGLXXXXXXXXXXXXXXXXXXXXXXXX-LGPDLEAEIASLEALAESLQQRKMRFEPKPALLVQQQQELEEHRRAIRATSVAGSLSSNSRPSASDHTNXXXXXXXXXXXTSSWSSXXXXXXXXXXXSSRLSSGHTNS-------------------------------------------------------SNNSNNILLLPSRGNEGVDGSHEVRRSVATDVDSNAGADSALAALEAFQAELEAREKEATAGGEGRSAPPVPPRAPGQGTPXXXP------------------------GGCVGD-----------------EWGHGVHDDDAGRPRTPRPXXXXX--XXXXXXXTPESDNGLIERLLSLDTEAIRKHAAAVAAGGDGCGSSSRGPSFPSSHGGAAVGGYADGRDAAP------GAGPGPVELRDTDERPPFGRPSEAAVDDDHHRAVFSVPRAAEAEGGGETILDNPQQQQQETRL-------EEEGPRDIGVDAGDGRCGGAGPAAAATTEGGGQASGSDHSVSFNAGAGPGSSTXXXXXXXXXGADGRYSXX--------XXXXXXXXXXXXXXXXXXXXXXETRLEEEGPRDAAVDAGDGRCGGAGPA 1234          
BLAST of mRNA_Ecto-sp13_S_contig12852.2353.1 vs. uniprot
Match: D7FKL2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL2_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 3.470e-78
Identity = 229/334 (68.56%), Postives = 238/334 (71.26%), Query Frame = 0
Query:  175 MPGSRAALGLWERAGGLDGDEAGVVERAGGVSPAGGTADTAQEVTEWARRIQASIENMNRLVDGFQLAGGGSSSSRSEAAGTVTSPDSSMSGVPXXXXXXXXXXXXXXXXASHATVSWSRGSRGVERAVVGAAAXXXXXXXXXXXXXSLSAYGLEGFASAQLGFRRGLEGVDGRPSTAEHRSADRSHEEKQKGEDESSGGWEEAKRDGAVRWEAGDGIVGASGXXXXXXIKPFVRSSLSSSSASSVLGRADAVLAEAARGIGXXXXXXXXXXXXXXXXXXXXXXXXNSLGPDLEAEIASLEALAESLQQRKMRFEPKPALLVQQQQELEEHRRA 508
            MPGSRAALGLWERAGGLDGDEAGVVE AGGVSP GGT DTAQEVTEWARRIQASIE+MNRLVDGFQLAG                         XXXXXXXXXXXXXXXX                        XXXXXXXXXXXXXSLSAYGLEGFASAQLGFRR    VDGRP  AEHR+ADRS EEK+KGED SSGGWEEAK +GAVRWEAGDGIVGASGXXXXX IK FVRSSLSSSSASSV+GRADAVLAEAARGIG                        +SLGPDLEAEIASLEALAESLQQRKMRFEPK       QQ+ ++HR A
Sbjct:    1 MPGSRAALGLWERAGGLDGDEAGVVETAGGVSPRGGTVDTAQEVTEWARRIQASIESMNRLVDGFQLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSAYGLEGFASAQLGFRR----VDGRPGPAEHRAADRSQEEKRKGEDASSGGWEEAKGEGAVRWEAGDGIVGASGXXXXX-IKSFVRSSLSSSSASSVMGRADAVLAEAARGIGLGSAASVGGGSYRSSSLSSSTGS-HSLGPDLEAEIASLEALAESLQQRKMRFEPK-------QQQQQQHRPA 321          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12852.2353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKD4_9PHAE1.160e-27761.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL2_ECTSI3.470e-7868.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 988..1009
NoneNo IPR availableCOILSCoilCoilcoord: 464..484
NoneNo IPR availableCOILSCoilCoilcoord: 637..657

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12852contigEcto-sp13_S_contig12852:55..4913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12852.2353.1mRNA_Ecto-sp13_S_contig12852.2353.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12852 55..4913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12852.2353.1 ID=prot_Ecto-sp13_S_contig12852.2353.1|Name=mRNA_Ecto-sp13_S_contig12852.2353.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1032bp
TLSSRAPRSPSSPGRYATDSYSSRRSSGSGDKENGEQKRGSPEEGGDGFL
VPPGTHQFGGGGGGGGGGGDGWRFRSGLGVTRGEAGETRLGAGGGGSTGT
SSGGGGGSTSSGGSGSTSGGGGGGGGGGGGGGGGASVVAPGGADAVSWDR
ELARTLWREGPAAPGWTSRWRQPAMPGSRAALGLWERAGGLDGDEAGVVE
RAGGVSPAGGTADTAQEVTEWARRIQASIENMNRLVDGFQLAGGGSSSSR
SEAAGTVTSPDSSMSGVPRRDDGDALSSGGTAESASHATVSWSRGSRGVE
RAVVGAAAATAAAAGAPASSSSLSAYGLEGFASAQLGFRRGLEGVDGRPS
TAEHRSADRSHEEKQKGEDESSGGWEEAKRDGAVRWEAGDGIVGASGGGG
GGGIKPFVRSSLSSSSASSVLGRADAVLAEAARGIGLGSAAVTVGGGGYG
SSSLSSSSGSNSLGPDLEAEIASLEALAESLQQRKMRFEPKPALLVQQQQ
ELEEHRRAIRATSVAGSSSSSLHPSASDHTNSSSSHLSSGHNNSSSSGVR
PSASDYTNSSSSHLFSGHKKSSSSSSRRSASDYTNSSSSRLSSGHTNSSN
NDNNNILLLPSKGSEGVDGTYEVRRSVATDADSNAGADSALAALEAFQAE
LEARERDATAGGEGRSTPPVPPWAPGQGTPPPPRGGGGVGDSAASPSGSS
SSSSSSSTGGNRGDGEHSSEGSQDFRLRTSDEWGHGLHDDDAGRPRTPRP
PLDSSPSSSSSSSTTPESDSGLIERLLSLDTEAIRKHAAAIAAGGDGCGS
SSRGPSFSSLYGGAAAGGYADGRDAAPVPAPAPGAGPGPIELRDTDERPP
FGRPSEAAVDDDHHLAGFSLPRAAEAEGEGGTKGYNLQQQQQQQQQQQQE
TRHEEEGLRDTGVDAGDGGGGGAGPTAAGTTGGGGQASGSDHSGSFNAGA
GPGSSTTGGSEWWRRGADGRYSESGTTASAAVAGSEHQQQQQQQQQQHQQ
QRRQETRREGERSRETAVDAGDGRGGGAGPAT
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