prot_Ecto-sp13_S_contig12851.2352.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12851.2352.1
Unique Nameprot_Ecto-sp13_S_contig12851.2352.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length215
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12851.2352.1 vs. uniprot
Match: D8LKY8_ECTSI (Pleckstrin homology (PH) domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKY8_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 6.260e-30
Identity = 86/109 (78.90%), Postives = 87/109 (79.82%), Query Frame = 0 
Query:    1 MEERIVVRKPPAVLVAMSRGTSATSSTVGGAXXXXXXDEGFGDDARSAAGSSGSGSSRDSSLLLTAVSPSRVPPPLVSVASSATLPPVSMASSVVSGGSFSNPWLSPIP 109
            +EERIVVRKPP VLVAMSRGTSAT       XXXXXXDE FGDDARSAAGSSGSGSSRDSSLLLTAVSPSRVPPPLVSVAS  TLPPVS ASS   GG    PW  P P
Sbjct:  935 VEERIVVRKPPPVLVAMSRGTSATXXXXXXXXXXXXXDEVFGDDARSAAGSSGSGSSRDSSLLLTAVSPSRVPPPLVSVASWGTLPPVSRASSCSLGGLVLQPWAIPHP 1043
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12851.2352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKY8_ECTSI6.260e-3078.90Pleckstrin homology (PH) domain-containing protein... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12851contigEcto-sp13_S_contig12851:780..1424 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12851.2352.1mRNA_Ecto-sp13_S_contig12851.2352.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12851 700..2014 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12851.2352.1 ID=prot_Ecto-sp13_S_contig12851.2352.1|Name=mRNA_Ecto-sp13_S_contig12851.2352.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=215bp
MEERIVVRKPPAVLVAMSRGTSATSSTVGGAGDYGEYDEGFGDDARSAAG
SSGSGSSRDSSLLLTAVSPSRVPPPLVSVASSATLPPVSMASSVVSGGSF
SNPWLSPIPNHHHRQQQQQHQHHQQRDDSAESSPPADSMSWLQPLPPPPP
PPQKDGKAKAENPWEPSTSRAAPAPARRGGMGLAYPSGRWVQTPQTGEIL
EEQPPAEPKDGGKV*
back to top