prot_Ecto-sp13_S_contig12851.2351.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12851.2351.1
Unique Nameprot_Ecto-sp13_S_contig12851.2351.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length123
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12851.2351.1 vs. uniprot
Match: D8LKY8_ECTSI (Pleckstrin homology (PH) domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKY8_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 2.000e-20
Identity = 102/123 (82.93%), Postives = 106/123 (86.18%), Query Frame = 0 
Query:    4 TTPRVPEDITVNTPVAPSPEAVLSAPGRKTFSGGXXXXXXXXXXXXKSGSLGFGFSGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---HALSLAVDDPPSPYETKGDED 123
            TTPRVP++ITVNTPVAPSPEAVLSAPGRKTFSGG            KSGSLGFGFSGAD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   HAL+LAVD+PPSP ETKGDED
Sbjct:  709 TTPRVPDNITVNTPVAPSPEAVLSAPGRKTFSGGGGAARRSS----KSGSLGFGFSGADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALTLAVDNPPSPDETKGDED 827
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12851.2351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKY8_ECTSI2.000e-2082.93Pleckstrin homology (PH) domain-containing protein... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12851contigEcto-sp13_S_contig12851:84..452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12851.2351.1mRNA_Ecto-sp13_S_contig12851.2351.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12851 84..453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12851.2351.1 ID=prot_Ecto-sp13_S_contig12851.2351.1|Name=mRNA_Ecto-sp13_S_contig12851.2351.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp
ASSTTPRVPEDITVNTPVAPSPEAVLSAPGRKTFSGGGGGSGGAARRSSK
SGSLGFGFSGADDEQEPAPTLTQQQRRQRAFLSTTATTVELGKSGGGSSS
SSHALSLAVDDPPSPYETKGDED
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