prot_Ecto-sp13_S_contig12845.2348.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12845.2348.1
Unique Nameprot_Ecto-sp13_S_contig12845.2348.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length164
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12845.2348.1 vs. uniprot
Match: D8LRX4_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX4_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 4.880e-103
Identity = 141/164 (85.98%), Postives = 148/164 (90.24%), Query Frame = 0 
Query:    1 MNLPAGWETGKDATGRTFYMNHETQQTQWNHPDDPTPESGRPPSYEPPSKDLYAAQGVATATAVSAPQYVETVGAEPS-IQYTTCACVGHHPHASGVVTTQPGPGHTVIVVQEGNRNIPPNAPDGGQWRQERYCGLITWLVALFVVPFIGCCMPCCPCDERTVS 163
            MNLPAGWE+G DATGRTFYMNHET+QTQWNHP DPTPES  PPSYEPPS  LYA QGV TATAV+APQYVETVGA+P+ IQ TTC   GHHP A GVVTTQPGPGHTVIVVQEGNRNIPPNAPDGGQW+QERYCGLITWLVALFVVPFIGCCMPCCPCDERT +
Sbjct:    1 MNLPAGWESGTDATGRTFYMNHETRQTQWNHPADPTPESRPPPSYEPPSNGLYAEQGVVTATAVTAPQYVETVGAQPAGIQLTTCTQAGHHPQAGGVVTTQPGPGHTVIVVQEGNRNIPPNAPDGGQWKQERYCGLITWLVALFVVPFIGCCMPCCPCDERTAA 164
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BLAST of mRNA_Ecto-sp13_S_contig12845.2348.1 vs. uniprot
Match: A0A6H5JEI3_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEI3_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 6.140e-94
Identity = 134/164 (81.71%), Postives = 139/164 (84.76%), Query Frame = 0 
Query:    1 MNLPAGWETGKDATGRTFYMNHETQQTQWNHPDDPTPESGRPPSYEPPSKDLYAAQGVATATAVSAPQYVETVGAEPSIQYTTCACVGHHPHASGVVTTQPGPGHTVIVVQEGNRNIPPNAPDGGQWRQERYCGLITWLVALFVVPFIGCCMPCCPCDERTVSV 164
            MNLPAGWE GKDATGRTFY+NHETQQTQWNHP DPTPE  RPPSYEPPS DLY AQGVATATAV AP +V+ VGA+P IQ       GHHPHAS VVTTQPGPGHTV VV    RN PPNAPDGGQWRQERYCGLITWLVALFVVPFIGCCMPCCPCDERTV +
Sbjct:    1 MNLPAGWEIGKDATGRTFYINHETQQTQWNHPADPTPELRRPPSYEPPSTDLYVAQGVATATAVPAPLFVQAVGAQPGIQ------AGHHPHASEVVTTQPGPGHTVTVV----RNCPPNAPDGGQWRQERYCGLITWLVALFVVPFIGCCMPCCPCDERTVYI 154
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BLAST of mRNA_Ecto-sp13_S_contig12845.2348.1 vs. uniprot
Match: A0A813G7E1_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G7E1_POLGL)

HSP 1 Score: 58.2 bits (139), Expect = 7.790e-8
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0 
Query:  117 IPPNAPDGGQWRQERYCGLITWLVALFVVPFIGCCMPCCPCDERTV 162
            +P  AP GG W  E+YCG+IT L+AL + PF+ C    CPCDER V
Sbjct:   14 VPYGAPPGGYWATEKYCGIITILIALCICPFVCC----CPCDERDV 55
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BLAST of mRNA_Ecto-sp13_S_contig12845.2348.1 vs. uniprot
Match: A0A813IVK9_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IVK9_POLGL)

HSP 1 Score: 59.7 bits (143), Expect = 1.430e-7
Identity = 35/86 (40.70%), Postives = 44/86 (51.16%), Query Frame = 0 
Query:   79 IQYTTCACVGHHPHASGVVTTQPGPGHTVIVVQEGNRNIPPNAPDGGQWRQERYCGLITWLVALFVVPFIGCCMPCCPCDERTVSV 164
            +Q    A VG     SG    Q   G+ +  V      +P  AP GG W  E+YCG+IT L+AL + PF+ C    CPCDER V V
Sbjct:  134 VQPAPSAMVGQPVVVSGGQAMQAPGGYMLPPVP-----VPYGAPPGGYWATEKYCGIITILIALCICPFVCC----CPCDERDVYV 210
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12845.2348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LRX4_ECTSI4.880e-10385.98WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JEI3_9PHAE6.140e-9481.71WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A813G7E1_POLGL7.790e-854.35Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A813IVK9_POLGL1.430e-740.70Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 2..34
e-value: 6.6E-11
score: 52.2
IPR001202WW domainPFAMPF00397WWcoord: 3..32
e-value: 6.8E-13
score: 48.5
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 7..32
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 1..34
score: 16.786
NoneNo IPR availableGENE3D2.20.70.10coord: 3..36
e-value: 5.0E-13
score: 50.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 150..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..149
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 2..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12845contigEcto-sp13_S_contig12845:99..4790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12845.2348.1mRNA_Ecto-sp13_S_contig12845.2348.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12845 99..4790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12845.2348.1 ID=prot_Ecto-sp13_S_contig12845.2348.1|Name=mRNA_Ecto-sp13_S_contig12845.2348.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=164bp
MNLPAGWETGKDATGRTFYMNHETQQTQWNHPDDPTPESGRPPSYEPPSK
DLYAAQGVATATAVSAPQYVETVGAEPSIQYTTCACVGHHPHASGVVTTQ
PGPGHTVIVVQEGNRNIPPNAPDGGQWRQERYCGLITWLVALFVVPFIGC
CMPCCPCDERTVSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf