mRNA_Ecto-sp13_S_contig12841.2347.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12841.2347.1 vs. uniprot
Match: D8LJ08_ECTSI (Carotenoid oxygenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ08_ECTSI) HSP 1 Score: 883 bits (2281), Expect = 0.000e+0 Identity = 431/458 (94.10%), Postives = 441/458 (96.29%), Query Frame = 1
Query: 1 LHHAGPARNWEGERMYGHWFDGDGMISKVVFKDGRVYAQNRFVSTDSWDPNAPEGERAAGTRRPWTPRPGGWRKNVFKQTGNLANTSVMVKGGKLYALYEGGKPTEIDPVTLETVGESDLGGIQAFYSAHPTTDRDTGETFNIGMGGAKGALEITKLSPDGVLQKSATYTPPASLFWHDNTITDEFVVAVSSPFAASLKSIFGSLLGFGQLGDAFRWDDNMKSEAFFFSRETLELVKRVELPGAPSSYHIVNGFQEEGKGSNVSVIIAKHRDGGGREKIETVFRNLMTTRQGKETSGFSEDMLCDAYKYEIDVEAGEVVSHGPAAPMQGALAMELPTMDFRYVGKPSRVVFTNALLGDAGFLNSLQRLDLSGKSGEAWTTHDFGESRYAGEPVFVPSSKDAQEGEGYLIVLVYNTKTHTTDVEVLDAQKVESPPLCTARIPWHMGASFHGVFTPTAHL 1374
L GPARNWEGERMYGHWFDGDGMISKVVFKDGRVYAQNRFVSTDSWDPNAPEG+RAAGTRRPWTPRPGGWRKNV KQTGNLANTSVMVKGGKLYALYEGGKPTEIDPVTLET+GE DLGGIQAFYSAHPTTDRDTGETFNIG+GGAKGALEITKLSPDGVLQKS TYTPPASLFWHDNTITDEFVVAVSSPFAASLKSIF S+LGFGQLGDAFRW+DNMKSEAFFFSRETLELVKRVELPGAPSSYHIVNGFQEEGKGSNVSVIIAKHRDGGGREKIETVFRNLMTTR FSED+LCDAYKYEID+EAGEVVSHGPAA MQGALAMELPTMDFRYVGKPSR+VFTNALLGD GFLNS+QR+DL GKSGEAWTTHDFGESRYAGEPVFVPSSKDAQEGEGYLIVLVYNTKTHTTDVEVLDAQKVESPPLCTARIPWHMGASFHGVFTPTAHL
Sbjct: 106 LFRNGPARNWEGERMYGHWFDGDGMISKVVFKDGRVYAQNRFVSTDSWDPNAPEGKRAAGTRRPWTPRPGGWRKNVLKQTGNLANTSVMVKGGKLYALYEGGKPTEIDPVTLETLGERDLGGIQAFYSAHPTTDRDTGETFNIGIGGAKGALEITKLSPDGVLQKSTTYTPPASLFWHDNTITDEFVVAVSSPFAASLKSIFASMLGFGQLGDAFRWNDNMKSEAFFFSRETLELVKRVELPGAPSSYHIVNGFQEEGKGSNVSVIIAKHRDGGGREKIETVFRNLMTTR-------FSEDVLCDAYKYEIDMEAGEVVSHGPAASMQGALAMELPTMDFRYVGKPSRIVFTNALLGDPGFLNSVQRVDLRGKSGEAWTTHDFGESRYAGEPVFVPSSKDAQEGEGYLIVLVYNTKTHTTDVEVLDAQKVESPPLCTARIPWHMGASFHGVFTPTAHL 556
BLAST of mRNA_Ecto-sp13_S_contig12841.2347.1 vs. uniprot
Match: A0A2N1YL06_9GAMM (Dioxygenase (Fragment) n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-14 TaxID=2013796 RepID=A0A2N1YL06_9GAMM) HSP 1 Score: 224 bits (570), Expect = 1.840e-61 Identity = 155/459 (33.77%), Postives = 238/459 (51.85%), Query Frame = 1
Query: 13 GPARNWEGERMYGHWFDGDGMISKVVFKDGRVYAQNRFVSTDSWDPNAPEGE---RAAGTRRPWTPRPGGWRKNVFKQTGNLANTSVMVKGGKLYALYEGGKPTEIDPVTLETVGESDLGGIQAF---YSAHPTTDRDTGETFNIGMG-GAKGA-LEITKLSPDGVLQKSATYTPPASLFWHDNTITDEFVVAVSSPFAASLKSIFGSLLGFGQLGDAFRWDDNMKSEAFFFSRETLELVKRVELPGAPSSYHIVNGFQEEGKGSNVSVIIAKHRDGGGREKIETVFRNLMTTRQGKETSGFSEDMLCDAYKYEIDVEAGEVVSHGPAAPMQGALAMELPTMDFRYVGKPSRVVFTNALL--GDAGFLNSLQRLDLSGKSGEAWTTHDFGESRYAGEPVFVPSSKDAQEGEGYLIVLVYNTKTHTTDVEVLDAQKVESPPLCTARIPWHMGASFHGVFT 1359
GP RN G++++GHWFDGDGM+ + F + V+ +NR+V T + G+ R+ G P GG KN+ + N ANTS++ G +L AL+EGG+P ++DPVTLET+GE + G F +SAH D +G +N G+G GAKG + I +++P+G + A + F HD+ +++V P K+ L G+ D R++ + EA TL+LV+R+ L +H N +QE G+ + + + + D E + +F E G ++Y +++E G SH A P+ A + E P D RY G+P+R +F+ A+ G GF N++QR D KSG A T HDFG R+ E VFVP + EG+GYL +VY+ H +DV +LDA++ P + + H+ FHG +T
Sbjct: 49 GPGRNRLGDQVFGHWFDGDGMLHGITFTEDGVWYRNRYVRTPKYLAETAAGKIVYRSFGHNAP-----GGVLKNIGRLPANAANTSLVWHGNRLLALWEGGRPWQVDPVTLETIGEFNYNGGLTFRDPFSAHGKVDPRSGYYYNHGLGVGAKGPQINIYRINPEGEMVAKAGIPVKVAAFVHDSAFAGDYLVYFVHP--VGFKNPLPFLSGWKAFNDCVRYNPDWGMEALIVEASTLKLVRRIPLDPFVV-FHFGNAWQE---GNQLVIDLMRFEDFQVNEVLSDIFH------AENEQGGVP-------WRYTLNLEDG---SHR-AEPLPFACSGEFPQWDLRYSGQPTRFLFSAAIADNGTNGFFNAIQRYD--NKSG-ALTLHDFGAGRFTSEAVFVPEGE--AEGDGYLCCVVYDASRHRSDVVLLDAREEGLPEVARIPLQHHVPFGFHGGYT 474
BLAST of mRNA_Ecto-sp13_S_contig12841.2347.1 vs. uniprot
Match: A0A0Q7TS88_9HYPH (Dioxygenase n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TS88_9HYPH) HSP 1 Score: 209 bits (531), Expect = 4.490e-56 Identity = 148/460 (32.17%), Postives = 224/460 (48.70%), Query Frame = 1
Query: 1 LHHAGPARNWEGERMYGHWFDGDGMISKVVFKDGRVYAQNRFVSTDSWDPNAPEGE---RAAGTRRPWTPRPGGWRKNVFKQTGNLANTSVMVKGGKLYALYEGGKPTEIDPVTLETVGESDLGGIQAFYSAHPTTDRDTGETFNIGMG-GAKGALEITKLSPDGVLQKSATYTPPASLFWHDNTITDEFVVAVSSPFAASLKSIFGSLLGFGQLGDAFRWDDNMKSEAFFFSRETLELVKRVELPGAPSSYHIVNGFQEEGKGSNVSVIIAKHRDGGGREKIETVFRNLMTTRQGKETSGFSEDMLCDAYKYEIDVEAGEVVSHGPAAPMQGALAMELPTMDFRYVGKPSRVVF--TNALLGDAGFLNSLQRLDLSGKSGEAWTTHDFGESRYAGEPVFVPSSKDAQEGEGYLIVLVYNTKTHTTDVEVLDAQKVESPPLCTARIPWHMGASFHGVFTP 1362
L G RN + + HWFDGDGMIS + F DG + NRFV TD++ EG R G RP GG N F+ +GN++NTSV+++G +L +L+EGG P ++P TLET+G D GG +SAHP D +GE +N G+ GAK L ++ DG L P + HD +T+ ++V P L +LG A WD + R+ + +E A +H NGF+ +G + + + ++ D + R+L T E S ++ D + + +ID+ +G V + E P ++ G+P R + N D G + + R+D ++G +HD G RYAGEPVF+P+ A E +G ++ LVY+ + TD+ LDA+ + + PL TAR+ H+ S HG FTP
Sbjct: 42 LFRNGAGRNDLNGKWFPHWFDGDGMISAIAFDDGGIRYLNRFVRTDNYINETREGRVLYRGFGKSRP-----GGILANAFRMSGNVSNTSVVMQGERLLSLWEGGAPYALNPKTLETLGIDDFGGRVRAFSAHPKVDPVSGELYNFGIDYGAKTTLTPYRIDSDGALTAYPAIPLPYPVMNHDFVLTENYLVFCLGPI---LVHPIKFILGLSSFDGALHWDGTRPTLILLLRRDGTAPPRWIEAD-AFFQFHFANGFERDGA---LFLDLTRYPD------YLAIGRSLRTY----EHSEWAADGMASLTRLQIDLASGAVGVRS----FDTGRSNEFPRINPARTGRPYRYAYIANNPNGDDIGLQHCVTRIDT--ETGRV-QSHDVGNGRYAGEPVFIPTG--AGEDDGVVVTLVYDAAANRTDILGLDARDLAARPLFTARLRHHVPYSLHGYFTP 470
BLAST of mRNA_Ecto-sp13_S_contig12841.2347.1 vs. uniprot
Match: A0A8J5XI00_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XI00_DIALT) HSP 1 Score: 209 bits (533), Expect = 8.140e-56 Identity = 152/480 (31.67%), Postives = 237/480 (49.38%), Query Frame = 1
Query: 1 LHHAGPARNWEGERMYGHWFDGDGMISKVVFKDGRV-YAQNRFVSTDSWDPNAPEGERAAGTRRPWTPR-PGGWRKNVFKQTGNLANTSV--MVKGGKLYALYEGGKPTEIDPVTLETVG---------ESDLGGIQ-AFYSAHPTTDRDTGETFNIGMG-GAKGALEITKLSPDGVLQKSATYTPPASLFWHDNTITDEFVVAVSSPFAASLKSIFGSLLGFGQLGDAFRWDDNMKSEAFFFSRETLELVKRVELPGAPSSYHIVNGFQE-EGKGSNVSVIIAKHRDGGGREKIETVFRNLMTTRQGKETSGFSEDMLCDAYKYEIDVEAGEVVSHGPAAPMQGALAMELPTMDFRYVGKPSRVVFTNALLGDAGFLNSLQRLDLS--GKSGEAWTTHDFGESRYAGEPVFVPSSKDA--------QEGEGYLIVLVYNTKTHTTDVEVLDAQKVESPPLCTARIPWHMGASFHGVFTP 1362
L+ G R G ++Y HWFDGDG ++++ R + RFV T + + R WTPR GG N + N ANT+V + G+LYAL EGG+P E+DP+TLET G S L G+ + AH D G +N G+ G L++ ++SPDG + S + + +HD +I+ F++ +P+ S + G+L+G G G F W+ + +S + + TL+ V + P S YH VN F++ E G V I A + D E+ + + T + + C + E+DV A +V A ELP ++ R+VG+P R V+ NAL G L ++++DL G+ + W+ G+ RYAGE VFVP + A +E EG+L++ VY++ H ++V VLDA+ + + P + R+P H+ SFHG + P
Sbjct: 62 LYRNGAGRIRVGTQLYSHWFDGDGFVTRLELDGSRTALSSGRFVRTPRFLAQGDTTDTMM-VRGAWTPRGDGGVLANCLRLPSNPANTNVARLPPDGRLYALCEGGRPLELDPLTLETTGGEYDARGALRSPLPGLPPTTFGAHMRVDPTDGTIYNFGLDYGLSLKLKLLRISPDGAVS-SRDFGLQSMPLYHDLSISGNFLILTRTPYEISTARVLGALVGSG--GSMFAWNADAQSHVDVYDKRTLQQVASIASPPF-SCYHHVNAFEDPERAGRTVLRIEAHNTDRLAVERQMSCMYDAWFTVENE----------CSLLELELDVPAATLVRSARLDGDGAARPAELPCINPRFVGRPHRWVYRNALGATCGCLQDVEKVDLRARGRPADRWSP---GDGRYAGESVFVPRTPGAVSAPCAPDEEDEGWLLLYVYDSAAHASEVVVLDARDLGAGPRWSVRLPAHVPPSFHGCWVP 523
BLAST of mRNA_Ecto-sp13_S_contig12841.2347.1 vs. uniprot
Match: A0A1X9NLA8_9GAMM (Dioxygenase n=1 Tax=Oceanicoccus sagamiensis TaxID=716816 RepID=A0A1X9NLA8_9GAMM) HSP 1 Score: 206 bits (523), Expect = 9.150e-55 Identity = 147/458 (32.10%), Postives = 238/458 (51.97%), Query Frame = 1
Query: 22 RNWEGERMYGHWFDGDGMISKVVFKDGRVYAQNRFVSTDSWDPNAPEGE---RAAGTRRPWTPRPGGWRKNVFKQTGNLANTSVMVKGGKLYALYEGGKPTEIDPVTLETVGESDLGGIQAF---YSAHPTTDRDTGETFNIGMGGA-KGALEITKLSPDG-VLQKSATYTPPASLFWHDNTITDEFVVAVSSPFAASLKSIFGSLLGFGQLGDAFRWDDNMKSEAFFFSRETLELVKRVELPGAPSSYHIVNGFQEEGKGSNVSVIIAKHRDGGGREKIETVFRNLMTTRQGKETSGFSEDMLCDAYKYEIDVEAGEVVSHGPAAPMQGALAMELPTMDFRYVGKPSRVVFTNALLGDA---GFLNSLQRLDLSGKSGEAWTTHDFGESRYAGEPVFVPSSKDAQEGEGYLIVLVYNTKTHTTDVEVLDAQKVESPPLCTARIPWHMGASFHGVFTP 1362
RN GE+ +GHWFDGDGMI+ V FK G+V+ +NR+V T + + R GT+ P GG+ KN+F+ GN ANT+V++ GGKL AL+EGGKP E+DP TL+TVGE + G+ + +SAH D TG +N G+ G K L K++P+G ++ K + Y S+ HD IT V V P A ++S F L GF + + +D + K++ TL +++ E +H+ N E+G +V V+ D + + VFR+ E + ++ +D++ G+ +H A + ++A E P +++Y G +R + ++ + GF N+ Q++D +GE + HDFGE R+ E F+P + E +GYLI ++YN ++V +LDA+ +++ + + + FHG F P
Sbjct: 59 RNKIGEQQFGHWFDGDGMINAVTFKAGQVHFKNRYVRTPKYMHETAQQRILYRGVGTQIP-----GGFLKNIFRTPGNAANTNVILHGGKLLALWEGGKPYELDPATLQTVGEYNFDGMLSTGQPFSAHSRHDPRTGFLYNFGVFGIPKPKLHFYKINPEGEMVDKKSHYVGDYSMC-HDFAITKNHAVFVLCP--AFMRSPFKFLFGFNSIMQSIEFDPSEKTKVVVIDLNTLHIIREFEFDSF-FGFHLGNAH-EQGNTLHVDVLCVDTMD--SMDGLSDVFRDRSNDEDFLEKGTVLK-------RFSLDLDTGK--AHSAVA--KNSIAGEFPLWNWQYTGVENRYTWLGTIVENGTPYGF-NAYQKIDHH--TGEV-SLHDFGEGRFTSELNFIPKANAQTEDDGYLIGIIYNHHKGNSEVVILDAKDIQTE-IAIIPLQQTIPFGFHGGFYP 488
BLAST of mRNA_Ecto-sp13_S_contig12841.2347.1 vs. uniprot
Match: A0A4D9DHN9_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHN9_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.860e-54 Identity = 160/508 (31.50%), Postives = 244/508 (48.03%), Query Frame = 1
Query: 46 YGHWFDGDGMISKVVFK-DGRVYAQNRFVSTDSW--DPNAPEGERAAGTRRPWTPR---PGGWRKNVFKQTGNLANTSVMV-----KGG--KLYALYEGGKPTEIDPVTLETVGESD-----LGGIQAFYSAHPTTDRDTGETFNIGMG-GAKGALEITKLSPDG-------VLQKSATYTPPASLFWHDNTITDEFVVAVSSPFAASLKSIFGSLLGFGQLGDAFRWDDNMKSEAFFFSRETLELVKRVELPGAPSSYHIVNGFQEEGKGSN----------VSVIIAKHRDGGGREKIETVFRNLMTTRQGKETSGFSEDMLCDAYKYEI------------------------DVEAGEVVSHGPAAPMQGALAMELPTMDFRYVGKPSRVVFTNALLGDAGFLNSLQRLDLSGKSGEAWTTHD--FGESRYAGEPVFVP-SSKDAQEG-------EGYLIVLVYNTKTHTTDVEVLDAQKVESPPLCTARIPWHMGASFHGVFT 1359
Y HWFDGDGM+S + F DGR + + R++ + NA EG A G R WT R G W +N+ + N NT+V+V +GG + AL EGG P E DPV+L E + G + +F+SAHP D DTG +N GM G AL I ++S VL + ++ HD + F++ SPF A ++ +LLG LG + W + K++A+ + TL V V++ S+YH VN +++EG V V++A+HR REK+E FR++ + F+ ++ C+ ++Y + V VV GP + ELPT++ VGK R + NAL+ + GF++S+ +L L +G H +AGE VFVP +D +EG +GYL+ V +T+ +D+ +LDAQ++E PPL +P + S+HGV+T
Sbjct: 162 YSHWFDGDGMVSALTFTADGRCFFRQRYLQGKKFLAQKNAKEG--AWGGRGVWTQRGGREGKWWENLGRIPDNPLNTNVLVLEGAKEGGMTRTLALCEGGLPFEFDPVSLAVRREPEDFAGPHGRLSSFFSAHPKVDPDTGILYNFGMLLGPSLALNIFEISSPSSSPSAQPVLLRQRSFPLAFIPTVHDFVLAGRFLIIFFSPFQAPPSALARALLGLSSLGGQYVWKNGGKTQAWVVEKSTLRRVAEVDIDPPFSNYHFVNAWEKEGGKEERTKTGDGDVEVEVLVAQHRS--PREKVEEQFRDMYK-------ADFTPELECETWRYVLRFAYEEGGGEGGTEDPQEQDGRDSSVRRARVVEAGPMPLAASSYGYELPTLNPFTVGKKGRFAYVNALVREEGFVDSVAKLHLD--AGGRMEVHRSCLPPGCFAGEAVFVPRGGRDKEEGTGRQEEDDGYLLFYVLDTRRQASDLVILDAQRMERPPLTVIHLPVRVPYSYHGVWT 656
BLAST of mRNA_Ecto-sp13_S_contig12841.2347.1 vs. uniprot
Match: UPI001E313993 (carotenoid oxygenase family protein n=1 Tax=Alcanivorax sp. 1008 TaxID=2816853 RepID=UPI001E313993) HSP 1 Score: 202 bits (515), Expect = 2.410e-54 Identity = 148/456 (32.46%), Postives = 229/456 (50.22%), Query Frame = 1
Query: 43 MYGHWFDGDGMISKVVFKDGRVYAQNRFVSTDSWDPNAPEGE---RAAGTRRPWTPRPGGWRKNVFKQTGNLANTSVMVKGGKLYALYEGGKPTEIDPVTLETVGESDLGGIQAF---YSAHPTTDRDTGETFNIGM--GGAKGALEITKLSPDGVLQKSATYTPPASLFWHDNTITDEFVVAVSSPFAASLKSIFGSLLGFGQLGDAFRWDDNMKSEAFFFSRETLELVKRVELPGAPSSYHIVNGFQEEGKGSNVSVIIAKHRDGGGREKIETVFRNLMTTRQGKETSGFSEDMLCDAYKYEIDVEAGEVVSHGPAAPMQGALAMELPTMDFRYVGKPSRVVFTNALL--GDAGFLNSLQRLDLSGKSGEAWTTHDFGESRYAGEPVFVPSSKDAQEGEGYLIVLVYNTKTHTTDVEVLDAQKVESPPLCTARIPW--HMGASFHGVFTPTAHL 1374
M+GHWFDGDGM+ V F D ++ +NR+V T + G+ R+ G P GG KN+ + N ANTS++ GG+L AL+EGG+P ++DPVTLET+GE + G +F +SAH D +G+ +N G+ GG + I +++ DG L + F HD +++V P ++ L G+ D R+D EA TL+LV+R+ L +H N +QE G + + + + D E + +F D ++Y +D+++G + A P A A E P D R+ GK +R +++ A+ G GF N++QRLD G +GE T HDFG R+ E VFVP + EG+GYL +VY+ + ++++ +LDA++ P + ARIP H+ FH +T A L
Sbjct: 1 MFGHWFDGDGMLHGVTFTDNGIWYRNRYVRTPKYLAETAAGKIVYRSFGHNAP-----GGVLKNIGRLPANAANTSLIWHGGRLLALWEGGRPWQVDPVTLETIGEFNFDGKLSFRDPFSAHGKIDPASGDYYNHGLSVGGRGPQINIYRINRDGDLVARTGIPVKVAAFVHDFAFAGDYLVYFVHP--VGFRNPLPFLSGWKAFNDCVRYDPAWGMEALVVDARTLKLVRRIRLDPFVV-FHFGNAWQE---GRKLVIDLMRFEDFSVNELLSDIFHA-------------ENDQGGVPWRYTLDLDSGS--AQAEALPF--ACAGEFPQWDLRFSGKKTRWLYSAAIADNGTNGFFNAIQRLD--GDTGEL-TMHDFGPGRFTSEAVFVPEGE--AEGDGYLCCVVYDASSRSSEIVLLDARQEGLPQV--ARIPLRNHVPFGFHCGYTRRAFL 421
BLAST of mRNA_Ecto-sp13_S_contig12841.2347.1 vs. uniprot
Match: A0A1F3AG32_9PROT (Dioxygenase n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F3AG32_9PROT) HSP 1 Score: 204 bits (518), Expect = 3.430e-54 Identity = 146/468 (31.20%), Postives = 227/468 (48.50%), Query Frame = 1
Query: 1 LHHAGPARNWEGERMYGHWFDGDGMISKVVFKDGRVYAQNRFVSTDSWDPNAPEGE---RAAGTRRPWTPRPGGWRKNVFKQTGNLANTSVMVKGGKLYALYEGGKPTEIDPVTLETVGESDLGGIQAFYSAHPTTDRDTGETFNIGMG-GAKGALEITKLSPDGVLQKSATYTPPASLFWHDNTITDEFVVAVSSPFAASLKSIFGSLLGFGQLGDAFRWDDNMKSEAFFFSRETLELVKRVELPGAPS--------SYHIVNGFQEEGKGSNVSVIIAKHRDGGGREKIETVFRNLMTTRQGKETSGFSEDMLCDAYKYEIDVEAGEVVSHGPAAPMQGALAMELPTMDFRYVGKPSRVVF--TNALLGDAGFLNSLQRLDLSGKSGEAWTTHDFGESRYAGEPVFVPSSKDAQEGEGYLIVLVYNTKTHTTDVEVLDAQKVESPPLCTARIPWHMGASFHGVFTP 1362
L G RN G + + HWFDGDGMIS V F D ++ +NR+V+T ++ G R G RP G N F+Q N++NTSV+++G +L +L+EGG PT +DP TL T G D GG+ +SAHP D DTGE FN G+ GAK L ++ G+L + P + HD +T ++V P L LLG A +WD + + R+ R + G P +H NGF+++G + + +A++ D +T+ L T + S + + + +D+ G+V + A E PT++ + GK R + +N + G + R+D +G +HDFG + Y GEP+FVP+ + E +G ++V+V+N+ H T++ LDA+ + + PL TAR+ H+ HG FTP
Sbjct: 43 LFRNGSGRNDLGGQWFAHWFDGDGMISAVRFDDSGIHYRNRYVATANYLDETRAGRIVHRGFGKMRPH-----GVLGNAFRQPANVSNTSVVLQGDRLLSLWEGGPPTALDPKTLGTSGIEDFGGVLKAFSAHPKIDPDTGELFNFGIDYGAKTTLTPYRIDR-GILTRLPPVVLPYPVMNHDFVLTARYLVFCLGPI---LVHPLKFLLGSKSFDGALQWDGSRPTRILLVPRDG-----RGDGRGGPRWIETDAFFQFHFANGFEDDG---TLVLDLARYPD------YDTIGEALRTYWR----SDWPSRGMAALTRLRVDLATGKVERQT----FETGSANEFPTINPAHTGKRHRYAYIASNPAECERGLQQRVSRVDFD--TGTV-VSHDFGPAGYVGEPLFVPTGRGGAEDDGVVLVMVFNSADHRTEIVGLDARDLAARPLFTARLKHHVPYPLHGTFTP 476
BLAST of mRNA_Ecto-sp13_S_contig12841.2347.1 vs. uniprot
Match: A0A7S3Z609_9EUKA (Hypothetical protein n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z609_9EUKA) HSP 1 Score: 200 bits (509), Expect = 4.910e-52 Identity = 150/474 (31.65%), Postives = 234/474 (49.37%), Query Frame = 1
Query: 1 LHHAGPARNWEGERMYGHWFDGDGMISKVVFKDGRVYAQN--RFVSTDSWD--PNAPEGERAAGTRRPWTPRPGGWRKNVFKQTGNLANTSVMVKGGKLYALYEGGKPTEIDPVTLETVGESDLGGIQ--AFYSAHP-----TTDRDTGET-FNIGMG-GAKGALEITKLSPDGVLQKSATYTPPASLFWHDNTITDEFVVAVSSPFAASLKSIFGSLLGFGQLGDAFRWDDNMKSEAFFFSRETLELVKRVELPGAPSSYHIVNGFQEEGKGSNVSVIIAKHRDGGGREKIETVFRNLMTTRQGKETSGFSEDMLCDAYKYEIDVEAGEVVSHGPAAPMQ-GALAMELPTMDFRYVGKPSRVVFTNAL--LGDA---GFLNSLQRLDLSGKSGEAWTTHDFGESRYAGEPVFVPSSKDAQEGEGYLIVLVYNTKTHTTDVEVLDAQKVESPPLCTARIPWHMGASFHGVFTPT 1365
L+ G R G YGHWFDGDG +S++ R A R+V TD + AP+ E +R WT R GG N+ + N ANTS + GKL AL EGG P E+DP +LET+GE + + AF+SAHP TTD+ G+T FN G+ G L + + + + S T A F HD +T+ + V +P+ S + + L+G LG ++W K+ F +ETLE+++ P A + H++NG+ + V +++ +++ ++ R S +++ L + ID+ G S + L ELP ++ RY G +R + NAL L D G LN++ ++DL ++GE +T FG+ +YA EP+FVP + E +GYL+ VY+T TH +++ +L A + + + H+ SFHG F T
Sbjct: 123 LYRNGAGRIRVGSNQYGHWFDGDGFVSRLSLDPTRNQASLTCRYVRTDRYQRQEGAPD-EAGFRSRGAWTQREGGALGNMGRSPTNPANTSPLSWNGKLLALCEGGPPIELDPESLETIGEYRMENLPKGAFFSAHPKEDHFTTDKGQGKTIFNNGLVIGPPMTLRLLRATEKEGVTNSRTLPMSALSFVHDFALTERYGVIFLNPYTVSYQDLLQGLVGTKALGMLYKWRPEDKTRIVVFDKETLEVIRDFRAP-AMTFDHVINGYDLDEDRIRVQLLL---------HPSDSIL-DIEKGRHDMYQSTWTQTTLPTFHN--IDITLGSSGSPPRVDTYEVSPLLSELPQINPRYTGARARWGYVNALKPLSDGALPGKLNAIGKIDL--ETGE-FTVRGFGDHKYADEPIFVPKANAQAEDDGYLLTYVYDTTTHKSEIHILRADNIMAESEAVISLSHHVPYSFHGCFVKT 579
BLAST of mRNA_Ecto-sp13_S_contig12841.2347.1 vs. uniprot
Match: A0A6L3VN69_9ACTN (Dioxygenase n=9 Tax=Actinomadura TaxID=1988 RepID=A0A6L3VN69_9ACTN) HSP 1 Score: 196 bits (499), Expect = 1.640e-51 Identity = 153/463 (33.05%), Postives = 225/463 (48.60%), Query Frame = 1
Query: 1 LHHAGPARNWEGERMYGHWFDGDGMISKVVFK-DGRVYAQNRFVSTDSWDPNAPEGERAAGTRRPWTPRPGGWRKNVFKQTGNLANTSVMVKGGKLYALYEGGKPTEIDPVTLETVGESDLGG---IQAFYSAHPTTDRDTGETFNIGMGGAK-GALEITKLSPDGVLQKSATYTPPASLFWHDNTITDEFVVAVSSPFAASLKSIFGSLLGFGQLGDAFRWDDNMKSEAFFFSRE--TLELVKRVELPGAPSSYHIVNGFQEEGKGSNVSVIIAKHRDGGGREKIETVFRNLMTTRQGKETSGFSEDMLCDAYKYEID--VEAGEVVSHGPAAPMQGALAMELPTMDFRYVGKPSRVVFTNALLGDAGFLNSLQRLD-LSGKSGEAWTTHDFGESRYAGEPVFVPSSKDAQEGEGYLIVLVYNTKTHTTDVEVLDAQKVESPPLCTARIPWHMGASFHGVFT 1359
L+ GP GE + H FDGDGM+S F DGR++ +NR+V T + +G AG R T RPGG N+ + N+ANT V++ GG+L AL+EGG+P +DP +LET+GE G + + +SAHP+ +TGE FN GM + +L ++ P G LQ + P S + HD +T ++V V +P I LLG G + DA ++ + + R+ +++ L G +H VN F++ G +V V + D +++ T FR+ T S F Y+ +E EV GP MELP D R G+P R + G + D ++G+ TTH+ GEPVFVP + DA EG+G+L+ L Y+ H + + VL AQ VE+ PL A + H+ FHG FT
Sbjct: 51 LYRNGPGCWQVGETLLDHIFDGDGMVSLFSFPGDGRIHYRNRYVRTRHYRYGQRKGR--AGLRGLGTQRPGGVLGNMLRPPANVANTGVVLHGGQLLALWEGGRPYRLDPDSLETLGEHSFDGRLKLMSAFSAHPSRCPETGELFNFGMDFTRLRSLRCYRVDPRGKLQHMPRISLPYSPWNHDFALTRRYLVFVINPVIPKAGPI---LLGTGSIADALTYEPDRPTCFAIVPRDGGKARVIEHKALLG----FHFVNAFED---GDDVVVEFVRFADW---DQVATRFRDFRT-------SDFPWGDALMRYRVSSSGRIEEQEVCG-GP---------MELPHADVRQAGRPHRYTY---FAGRTPTSTGIHAYDHVTGRR----TTHELPPGHGFGEPVFVPRTPDADEGDGWLLTLAYDPDEHRSRLLVLGAQDVEAEPLAVAHLRHHIPMGFHGSFT 474 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12841.2347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12841.2347.1 >prot_Ecto-sp13_S_contig12841.2347.1 ID=prot_Ecto-sp13_S_contig12841.2347.1|Name=mRNA_Ecto-sp13_S_contig12841.2347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=445bp MYGHWFDGDGMISKVVFKDGRVYAQNRFVSTDSWDPNAPEGERAAGTRRPback to top mRNA from alignment at Ecto-sp13_S_contig12841:2..4623- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12841.2347.1 ID=mRNA_Ecto-sp13_S_contig12841.2347.1|Name=mRNA_Ecto-sp13_S_contig12841.2347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4622bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12841:2..4623- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12841:2..4623- >mRNA_Ecto-sp13_S_contig12841.2347.1 ID=mRNA_Ecto-sp13_S_contig12841.2347.1|Name=mRNA_Ecto-sp13_S_contig12841.2347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1335bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12841:2..4623- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |