prot_Ecto-sp13_S_contig1284.2345.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1284.2345.1
Unique Nameprot_Ecto-sp13_S_contig1284.2345.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length671
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1284.2345.1 vs. uniprot
Match: A0A6H5JA21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA21_9PHAE)

HSP 1 Score: 590 bits (1521), Expect = 2.400e-200
Identity = 487/565 (86.19%), Postives = 497/565 (87.96%), Query Frame = 0 
Query:    1 MSNERSVNQQQXXXXEDSWDPFIKNVMTSTFGTLAIRALPDLNWPDILRLHARTVATQLLRGGDTNTLLADDMNAFISGDNAQFVFHPFHAVAAYGHGLPTSLLSALVSPAARAAESSREFADRAAAALAAGSSSATDDHPAADALAQRESTAPAAGDAVPDATTMTTTT---NAGFHCDARDERLRTALHWASTTGQADWISALIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNFRLSGGAGYGGSGGTPLILAAREGNAEIARLLCDARASLEDRDGIGFTALMTAVAHRHLGVTEALLAFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSARIAYPPPRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLPALPNAPPPPSTTPIGVVGLGNCGREEDPTLRLPTESAAEHARRRDPQTMEAIRMALRNAPADRAWRRRSWLVMLRASAEAEAAAKATRNKWELSSMAGSVVDLIGNRLVLGETGREQGAEDSVDKEERVTGG 562
            MSNE  V+QQQ    EDSWDP IKNVMTSTFGTL IRALPDL+WPDILR HARTVATQLLRGGD N LLADD NAFIS DNAQFVFHPFHAVAAYGHGLPTSLLSALVSPAA AAESSREFADRAAAAL      ATDDHPAADALA RES APA  +AV D TT        NAGFHCDARDERLRTALHW STTGQADWISALI      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNFRLS GAGYGG GGTPLILAAREGNAEIARLLCDA ASLEDRDGIGFTALM                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSARIAYPPPRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+QLPA  NAPPPPSTTPIGVVGLG+CGR+EDPTLRLP ESAAEHARRRDPQTMEAIRMALRNAPADRAWRRRSWLVMLRASAEAEAAAKATR KWELSSMAGSVVDLI NRLVLGET RE+GA+D+VDK+ERVTGG
Sbjct:    1 MSNEGPVDQQQQQQ-EDSWDPVIKNVMTSTFGTLGIRALPDLDWPDILRFHARTVATQLLRGGDINDLLADDTNAFISVDNAQFVFHPFHAVAAYGHGLPTSLLSALVSPAASAAESSREFADRAAAALXXXXXXATDDHPAADALAPRESRAPATAEAVSDGTTXXXXXXXXNAGFHCDARDERLRTALHWGSTTGQADWISALIRAGADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNFRLSDGAGYGGDGGTPLILAAREGNAEIARLLCDAGASLEDRDGIGFTALMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSARIAYPPPRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQLPAPSNAPPPPSTTPIGVVGLGHCGRDEDPTLRLPAESAAEHARRRDPQTMEAIRMALRNAPADRAWRRRSWLVMLRASAEAEAAAKATRKKWELSSMAGSVVDLIDNRLVLGETSREKGAKDAVDKKERVTGG 564
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BLAST of mRNA_Ecto-sp13_S_contig1284.2345.1 vs. uniprot
Match: D7FPM3_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM3_ECTSI)

HSP 1 Score: 563 bits (1451), Expect = 2.190e-190
Identity = 465/531 (87.57%), Postives = 478/531 (90.02%), Query Frame = 0 
Query:   36 IRALPDLNWPDILRLHARTVATQLLRGGDTNTLLADDMNAFISGDNAQFVFHPFHAVAAYGHGLPTSLLSALVSPAARAAESSREFADRAAAALAAGSSSATDDHPAADALAQRESTAPAAGDAVPDATTMTTTTNAGFHCDARDERLRTALHWASTTGQADWISALIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNFRLSGGAGYGGSG----GTPLILAAREGNAEIARLLCDARASLEDRDGIGFTALMTAVAHRHLGVTEALLAFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSARIAYPPPRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLPALPNAPPPPSTTPIGVVGLGNCGREEDPTLRLPTESAAEHARRRDPQTMEAIRMALRNAPADRAWRRRSWLVMLRASAEAEAAAKATRNKWELSSMAGSVVDLIGNRLVLGETGREQGAEDSVDKEERVTGG 562
            +RALPDLNWPDI+R HARTVATQ LRGG+TN  LADD+NAF+  DNAQFVFHP HAVAAYGHG PTSLLSALVSP A AAESSREFADRAAAALAA SS ATDDHPAADALA RESTAPAAG+AVPD T    TTNAGFHCDARDE LRTALHWASTTGQADWISALI      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNFRL G  G G       GTPLILAAREGNAEIA LLCDA A+LE+RDGI FTALMTAVAHRHLGVTE      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SARIAYPPPRS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLPA+PNAPPPPSTTP+GVVGLGNCGR+EDPTLRL TESAAEHARRRDPQTMEAIRMALRNAPADRAWRRRSWLVMLR SAEAEAAAKATR KWELSSMAGSVVDLIGNRLVLGE GREQGA+D+VDKEERVTGG
Sbjct:    1 MRALPDLNWPDIVRFHARTVATQQLRGGNTNNFLADDLNAFVGVDNAQFVFHPLHAVAAYGHGRPTSLLSALVSPTASAAESSREFADRAAAALAAESSRATDDHPAADALAARESTAPAAGEAVPDGTPTMPTTNAGFHCDARDEHLRTALHWASTTGQADWISALIRAGADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNFRLGGNTGGGAXXXXXXGTPLILAAREGNAEIASLLCDAGAALEERDGINFTALMTAVAHRHLGVTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARIAYPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLPAVPNAPPPPSTTPVGVVGLGNCGRDEDPTLRLTTESAAEHARRRDPQTMEAIRMALRNAPADRAWRRRSWLVMLRVSAEAEAAAKATRKKWELSSMAGSVVDLIGNRLVLGEAGREQGAKDAVDKEERVTGG 531
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1284.2345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JA21_9PHAE2.400e-20086.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPM3_ECTSI2.190e-19087.57Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 256..271
score: 44.08
coord: 370..384
score: 39.96
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 215..244
e-value: 0.21
score: 20.7
coord: 255..284
e-value: 0.058
score: 22.5
coord: 321..350
e-value: 160.0
score: 10.9
coord: 390..419
e-value: 9.9
score: 15.1
coord: 288..317
e-value: 0.35
score: 19.9
coord: 354..383
e-value: 0.0016
score: 27.7
coord: 182..211
e-value: 0.067
score: 22.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 354..386
score: 11.888
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 255..287
score: 10.526
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 215..247
score: 10.205
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 182..214
score: 10.686
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 390..422
score: 9.164
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 288..320
score: 9.858
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 251..424
e-value: 3.5E-38
score: 133.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 74..250
e-value: 2.0E-17
score: 65.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 173..420
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 176..244
e-value: 1.5E-6
score: 28.7
coord: 334..419
e-value: 2.4E-8
score: 34.5
coord: 255..316
e-value: 5.7E-8
score: 33.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 171..422
score: 56.795
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 161..282
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 356..416
coord: 256..347
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 161..282
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 356..416
coord: 256..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1284contigEcto-sp13_S_contig1284:585..4438 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1284.2345.1mRNA_Ecto-sp13_S_contig1284.2345.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1284 424..4438 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1284.2345.1 ID=prot_Ecto-sp13_S_contig1284.2345.1|Name=mRNA_Ecto-sp13_S_contig1284.2345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=671bp
MSNERSVNQQQQQQQEDSWDPFIKNVMTSTFGTLAIRALPDLNWPDILRL
HARTVATQLLRGGDTNTLLADDMNAFISGDNAQFVFHPFHAVAAYGHGLP
TSLLSALVSPAARAAESSREFADRAAAALAAGSSSATDDHPAADALAQRE
STAPAAGDAVPDATTMTTTTNAGFHCDARDERLRTALHWASTTGQADWIS
ALIRAGADPDATDVDGRPPLQYAVEAAKASAVRSLLEGGADKNFRLSGGA
GYGGSGGTPLILAAREGNAEIARLLCDARASLEDRDGIGFTALMTAVAHR
HLGVTEALLAFGADADTESSTKMTPLMVSVATCDVPITRALLRSGATAGQ
AGIGDLTPLHLAAGKGSVDLVEDLLRAGADPSARIAYPPPRSTPLHSACR
STRLGAVKALLLAGADETMGDMTPPPAQLPALPNAPPPPSTTPIGVVGLG
NCGREEDPTLRLPTESAAEHARRRDPQTMEAIRMALRNAPADRAWRRRSW
LVMLRASAEAEAAAKATRNKWELSSMAGSVVDLIGNRLVLGETGREQGAE
DSVDKEERVTGGGSGGSGVENGAGNGTAEDAAAAAAAAAPATIASERSGA
EAAGAAVAMGTRRRPAARGMGMRLRVALQQRRRVPGRGPRKKRHPPRIVR
VTISMPMAEIIAHVRRRRRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom