mRNA_Ecto-sp13_S_contig1283.2335.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1283.2335.1 vs. uniprot
Match: D7FRX5_ECTSI (Geranylgeranyl diphosphate reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRX5_ECTSI) HSP 1 Score: 846 bits (2186), Expect = 2.310e-301 Identity = 423/429 (98.60%), Postives = 426/429 (99.30%), Query Frame = 1
Query: 1423 GMEMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGSRKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISDKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVMTSGNNPVEDLKLLFGTFGSLMRGQALAPPDVSFSNPVESLKRL 2709
GM+MKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGSRKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKIS+KKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKV GNNPVEDLKLLFGTFGSLMRGQALAPPDV+FSNPVESLKRL
Sbjct: 48 GMKMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGSRKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISEKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVQ--GNNPVEDLKLLFGTFGSLMRGQALAPPDVTFSNPVESLKRL 474
BLAST of mRNA_Ecto-sp13_S_contig1283.2335.1 vs. uniprot
Match: A0A835YKR3_9STRA (Geranylgeranyl diphosphate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR3_9STRA) HSP 1 Score: 659 bits (1700), Expect = 9.650e-228 Identity = 327/437 (74.83%), Postives = 371/437 (84.90%), Query Frame = 1
Query: 1402 TLT*YDLGMEMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGSRKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISDKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTG-KLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVMTSGNNPVEDLKLLFGTFGSLMRGQALAPPDVSFSNPVESLKRL 2709
+LT ++MK+KVAVVGGGPSG+CAAEI A DV+ + ERKMDNAKPCGGAIPLCM+DEF LP +IDRKVRKMKMISPTNREVDIG TL DEYIGMVRRE++DG++R RAIE GA INGLV IDVP + G+YKIH YE + G ++ E DLIIG+DGANSRVAKAMDAG YNYAIAFQER++++ ++M+FYEE+AEMYVGDDVSPDFYGWVFPKYDHV VGTGTVVNRP I +YQ A+R+RAG KIEGG IIKIEAHPIPE+YRPRRVVGRM LVGDAAGYVTKCSGEGIYFAAKSGRMAAE +V +K G KLPTEAQ+K TY+K YD+ YKPTY+VLD+LQ++FYSNNAAREAFVE+CESEYVQKVTFDSYLYK+V GNNPVED+KLLF T GSL RG ALAPPD +SNPVESLKRL
Sbjct: 42 SLTRSAAHLDMKFKVAVVGGGPSGACAAEIFAQYPDVETVIIERKMDNAKPCGGAIPLCMVDEFKLPEKLIDRKVRKMKMISPTNREVDIGTTLKPDEYIGMVRREILDGYLRSRAIEYGATPINGLVTKIDVPQGHN-GRYKIHLQNYEGAQKVGTKEEMEVDLIIGADGANSRVAKAMDAGDYNYAIAFQERVRVNPEQMKFYEELAEMYVGDDVSPDFYGWVFPKYDHVAVGTGTVVNRPAIMEYQKAMRERAGAKIEGGTIIKIEAHPIPEHYRPRRVVGRMVLVGDAAGYVTKCSGEGIYFAAKSGRMAAEEIVAVMKANGGKLPTEAQIKDTYIKKYDQAYKPTYIVLDLLQRIFYSNNAAREAFVEMCESEYVQKVTFDSYLYKRVQ--GNNPVEDIKLLFNTVGSLFRGAALAPPDKPYSNPVESLKRL 475
BLAST of mRNA_Ecto-sp13_S_contig1283.2335.1 vs. uniprot
Match: A0A835YXG4_9STRA (Geranylgeranyl diphosphate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG4_9STRA) HSP 1 Score: 657 bits (1694), Expect = 7.500e-227 Identity = 322/429 (75.06%), Postives = 372/429 (86.71%), Query Frame = 1
Query: 1426 MEMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGSRKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISDKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIK-QTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVMTSGNNPVEDLKLLFGTFGSLMRGQALAPPDVSFSNPVESLKRL 2709
M+MKY+VAVVGGGPSG+CAAEI A DV+ +FERKMDNAKPCGGAIPLCM+DEF LP ++IDRKVR+MKMISPTNREVDIG TL +EYIGMVRRE++DG++R+RAIE GA INGLV +I+VP + +GKYKI + Y+ + G ++ E DLI+G+DGANSRVAKAMDAG YNYAIAFQERI+++D++M+ YEE+AEMYVGDDVSPDFYGWVFPKYDHV VGTGTV+NRP I++YQ A+R RAG KIEGGKIIKIEAHPIPE+YRPRRVVGRM LVGDAAGYVTKCSGEGIYFAAKSGRMAAE +V +K G LPTE+Q+K TY+ YDK YKPTY+VLD+LQ+VFYSNN AREAFVE+C+SEYVQKVTFDSYLYKKV GNNPVED+KLLFGT GSL+RG A APPD FSNPVESLKRL
Sbjct: 49 MDMKYRVAVVGGGPSGACAAEIFAQYGDVETVIFERKMDNAKPCGGAIPLCMVDEFKLPETLIDRKVRRMKMISPTNREVDIGDTLKPNEYIGMVRREILDGYLRERAIEFGATPINGLVTNIEVP-EGHNGKYKIVYQNYDGAKKVGTKEEMEVDLIVGADGANSRVAKAMDAGEYNYAIAFQERIRVNDEQMKVYEELAEMYVGDDVSPDFYGWVFPKYDHVAVGTGTVINRPAIQEYQKAMRARAGAKIEGGKIIKIEAHPIPEHYRPRRVVGRMVLVGDAAGYVTKCSGEGIYFAAKSGRMAAEEIVALMKANNGALPTESQIKDTYIAKYDKAYKPTYIVLDLLQRVFYSNNGAREAFVEMCDSEYVQKVTFDSYLYKKVQ--GNNPVEDIKLLFGTIGSLIRGAATAPPDRPFSNPVESLKRL 474
BLAST of mRNA_Ecto-sp13_S_contig1283.2335.1 vs. uniprot
Match: A0A7S2V8F2_9STRA (Geranylgeranyl diphosphate reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8F2_9STRA) HSP 1 Score: 656 bits (1693), Expect = 1.060e-226 Identity = 323/428 (75.47%), Postives = 368/428 (85.98%), Query Frame = 1
Query: 1426 MEMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGSRKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISDKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVMTSGNNPVEDLKLLFGTFGSLMRGQALAPPDVSFSNPVESLKRL 2709
++MKY VAV+GGGPSGSCAAEI A ++D L ERKMDNAKPCGGAIPLCMIDEFDLPT+IIDR+VR+MKMISP++REVDIGQTL EYIGM RRE++DG++RDRA+E GA AINGLV DI++P GKY I+ YE + G + E D++IG+DGANSR+AKAMDAG YNYAIAFQERI+ISD++M+FYE++AEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRP IK+YQ+AIR RAG+KI GGKIIK+EAHPIPE+ RPRRVV R LVGDAAGYVTKCSGEGIYFAAKSGRMAAEA+V+ +K +LPTE ++K TY+KDYDK Y PTY VLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYK+V GNNPVED+KLLF T G+L RG ALA PD FSNPVESLKRL
Sbjct: 50 LQMKYTVAVIGGGPSGSCAAEIFAKEKNIDTVLIERKMDNAKPCGGAIPLCMIDEFDLPTNIIDRQVRRMKMISPSDREVDIGQTLAPGEYIGMTRREILDGYLRDRAVEYGAKAINGLVTDIEIPTTP-GGKYIINLQNYEGSKKAGTPEKIEADIVIGADGANSRLAKAMDAGEYNYAIAFQERIRISDEQMKFYEDLAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPGIKEYQNAIRARAGDKIAGGKIIKVEAHPIPEHMRPRRVVDRAVLVGDAAGYVTKCSGEGIYFAAKSGRMAAEAIVKLMKNGSRLPTEQEIKDTYIKDYDKAYGPTYTVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKRVQ--GNNPVEDIKLLFTTVGALFRGNALASPDKEFSNPVESLKRL 474
BLAST of mRNA_Ecto-sp13_S_contig1283.2335.1 vs. uniprot
Match: A0A7S2WEE7_9STRA (Geranylgeranyl diphosphate reductase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEE7_9STRA) HSP 1 Score: 654 bits (1688), Expect = 5.830e-226 Identity = 321/428 (75.00%), Postives = 366/428 (85.51%), Query Frame = 1
Query: 1426 MEMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGSRKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISDKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVMTSGNNPVEDLKLLFGTFGSLMRGQALAPPDVSFSNPVESLKRL 2709
+E KYKVAV+GGGPSG+CAAEI A +++ L ERKMDN KPCGGAIPLCM+DEF LP SIIDRKVRKMKMISPTNREVDIGQTL ++EYIGM RREV+D ++RDRA+E GA AINGLV +DVP D GKYKIH+A Y R G ++ + DLI+G+DGANSRVAKA+ AG YNYAIAFQERIKI D+KM FYE++AEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRP IKDYQ AIR RAGEKI GGKIIK+EAHPIPE+ RPRRVVGR+ALVGDAAGYVTKCSGEGIYFAAKSGRMAAE++ + ++ +LPTE ++K TY++DYD+ Y PTY VLDILQKVFYS+N AREAFV++C+SEYVQKVTFDSYLYKKV GNNPVED+KLL GT GSL+RG A+APPD F NP ESLKRL
Sbjct: 49 VEAKYKVAVIGGGPSGACAAEIFAQEPNIETVLIERKMDNCKPCGGAIPLCMVDEFKLPDSIIDRKVRKMKMISPTNREVDIGQTLAEEEYIGMTRREVLDAYLRDRAVEYGATAINGLVTQVDVP-DTADGKYKIHYANYAGDKRVGTAETLDVDLIVGADGANSRVAKAIGAGEYNYAIAFQERIKIDDEKMAFYEDLAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPGIKDYQKAIRDRAGEKIAGGKIIKVEAHPIPEHMRPRRVVGRVALVGDAAGYVTKCSGEGIYFAAKSGRMAAESICKLMEGGSRLPTEKEIKDTYIQDYDRAYGPTYTVLDILQKVFYSSNGAREAFVDMCDSEYVQKVTFDSYLYKKVQ--GNNPVEDIKLLIGTIGSLIRGSAIAPPDKPFYNPEESLKRL 473
BLAST of mRNA_Ecto-sp13_S_contig1283.2335.1 vs. uniprot
Match: A0A7S2APY9_9STRA (Geranylgeranyl diphosphate reductase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APY9_9STRA) HSP 1 Score: 651 bits (1680), Expect = 8.450e-225 Identity = 324/429 (75.52%), Postives = 367/429 (85.55%), Query Frame = 1
Query: 1426 MEMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVP-ADKDSGKYKIHFARYEKGSRKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISDKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVMTSGNNPVEDLKLLFGTFGSLMRGQALAPPDVSFSNPVESLKRL 2709
+E KY+VAVVGGGPSGSCAAE+ A DVD + ERKMDN KPCGGAIPLCM+DEF+LP IIDRKVRKMKMISPTNREVDIGQTL DEYIGM+RREVMDG++RDRAIE GA INGLV +++VP AD+D+ Y I +A Y R G + E D++IG+DGANSRVAKA+DAG YNYAIAFQERIKI D+KM FYEE+AEMYVGDDVSPDFYGWVFPKYDHVGVGTGTV+NRP IKDYQ AIR+RAG KIEGGKIIK+EAHPIPE+ RPRRVVGR ALVGDAAGYVTKCSGEGIYFAAKSGRMAAE + + ++ +LPTE ++K+TY+KDYD+ Y PTY VLDILQKVFYSNN AREAFVELC+SEYVQKVTFDSYLYKKV GN+P+ED+KLL T GSL+RG A+A PDV +NPVESLKRL
Sbjct: 46 VEAKYRVAVVGGGPSGSCAAEVFAQNKDVDTWIIERKMDNCKPCGGAIPLCMVDEFNLPADIIDRKVRKMKMISPTNREVDIGQTLKPDEYIGMLRREVMDGYLRDRAIEFGAQPINGLVTEVEVPTADRDT--YLIKYANYAGNKRVGTPEVLEVDIVIGADGANSRVAKAIDAGEYNYAIAFQERIKIDDEKMAFYEELAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVINRPGIKDYQKAIRERAGAKIEGGKIIKVEAHPIPEHMRPRRVVGRAALVGDAAGYVTKCSGEGIYFAAKSGRMAAENICRLMQGGTRLPTEQEIKQTYIKDYDRAYGPTYTVLDILQKVFYSNNGAREAFVELCDSEYVQKVTFDSYLYKKVQ--GNSPIEDIKLLGNTIGSLIRGNAIAQPDVPINNPVESLKRL 470
BLAST of mRNA_Ecto-sp13_S_contig1283.2335.1 vs. uniprot
Match: A0A7S1XU03_9STRA (Geranylgeranyl diphosphate reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU03_9STRA) HSP 1 Score: 645 bits (1664), Expect = 2.200e-222 Identity = 315/428 (73.60%), Postives = 357/428 (83.41%), Query Frame = 1
Query: 1426 MEMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGSRKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISDKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVMTSGNNPVEDLKLLFGTFGSLMRGQALAPPDVSFSNPVESLKRL 2709
MEMKY VAV+GGGP+G+CAA+ LA+C +D +FERK DNAKPCGGAIPLCM+DEFDLP IIDRKVRKMKMISPTNREVDIGQTL +EYIGM RRE++DGF+R+RAIEKGA +NGLV I P + +GKY + + YEK GV+ E D++IG+DGANSRVA A+ AG YN+AIAFQERI+I+D++M+FYEE+AEMYVGDDVSPDFYGWVFPKYDHVGVGTGTV+NRP IKDYQ AIR RAG KI GGKIIK+EAHPIPE+YRP+R GR LVGDAAGYVTKCSGEGIYFAAKSGRMA EAVV+ +K +LPTE ++ YLK YDKLY TY VLDILQKVFYSNN AREAFVE+CESEYVQKVTFDSYLYKKV GNNPVED+KLLF T GSL RG ALA PD FSNP ESL R+
Sbjct: 45 MEMKYSVAVIGGGPAGACAADALAECKGIDTFIFERKFDNAKPCGGAIPLCMVDEFDLPEDIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREILDGFLRERAIEKGAVGVNGLVTTIKTPEETGNGKYFLEYQEYEKNKSVGVRKQMEVDVLIGADGANSRVASAIGAGEYNFAIAFQERIRITDEQMKFYEELAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVINRPAIKDYQKAIRDRAGAKIAGGKIIKVEAHPIPEHYRPKRAAGRAMLVGDAAGYVTKCSGEGIYFAAKSGRMAGEAVVKAMKGGSRLPTEKDIRDLYLKPYDKLYGATYTVLDILQKVFYSNNGAREAFVEMCESEYVQKVTFDSYLYKKVQ--GNNPVEDIKLLFTTVGSLFRGNALAEPDREFSNPKESLNRI 470
BLAST of mRNA_Ecto-sp13_S_contig1283.2335.1 vs. uniprot
Match: A0A4D9DCN1_9STRA (Geranylgeranyl diphosphate reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCN1_9STRA) HSP 1 Score: 641 bits (1653), Expect = 1.090e-220 Identity = 318/429 (74.13%), Postives = 367/429 (85.55%), Query Frame = 1
Query: 1426 MEMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGS-RKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISDKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVMTSGNNPVEDLKLLFGTFGSLMRGQALAPPDVSFSNPVESLKRL 2709
M+MKY+V VVGGGPSGSCAAE LA +++ L ERKMDNAKPCGGAIPLCM+ EFDLP IIDRKVRKMKMISPTNREVDIGQTL +EYIGM RREV+DGF+R RA+ GA AINGLV +++P + G+YKIH++ +EKG+ G+ ++ E D+IIG+DGANSRVAKA+DAG YNYAIAFQERIKIS++KM FYEE+AEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRP IK YQ AIR RAG+KI GKIIK+EAHPIPE+ RPRRVVGR+AL+GDAAGYVTKCSGEGIYFAAKSGRMAA+++ + + +LPTE ++K TY+KDYD+LY PTY VLDILQ+VFYS+NAAREAFVELCESEYVQKVTFDSYLYK+V GNNPVED+KLLF T G+LMRG ALAP D NPVESLKRL
Sbjct: 47 MDMKYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELPTT-EGGRYKIHYSNFEKGTGAAGIPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQ--GNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 472
BLAST of mRNA_Ecto-sp13_S_contig1283.2335.1 vs. uniprot
Match: A0A7R9YFU9_9STRA (Geranylgeranyl diphosphate reductase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFU9_9STRA) HSP 1 Score: 641 bits (1654), Expect = 2.190e-220 Identity = 323/451 (71.62%), Postives = 365/451 (80.93%), Query Frame = 1
Query: 1357 RPRTSDLPKNNSENLTLT*YDLGMEMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGSRKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISDKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVMTSGNNPVEDLKLLFGTFGSLMRGQALAPPDVSFSNPVESLKRL 2709
RPR LP +L ++ M KY VAV+GGGP+G+CAAEI A+ +D +FERKMDNAKPCGGAIPLCM+DEFDLP+ IIDRKVR+MKMISPTNREVDIGQTL EYIGM RRE++DG++RDRAIEKGA A+N LV +I P + +GKY + + YE G GV E D++IG+DGANSRVAKA+ AG YNYAIAFQERIKI+D++M FYEE+AEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRP IK+YQ AIR RAG KI GGKIIK+EAHPIPE+YRPRRV GR LVGDAAGYVTKCSGEGIYFAAKSGRMA EAVV + +LPTE Q+K YLK YDK Y PTY VLD+LQKVFY+NNAAREAFVE+CES YVQ VTF+SYLYKKV GNNPV D+KLLF T GSL RG ALAP D +FSNPVESLKRL
Sbjct: 56 RPRA--LPSARGVSLRAAQREI-MTAKYSVAVIGGGPAGACAAEICAEEKGIDTFIFERKMDNAKPCGGAIPLCMVDEFDLPSDIIDRKVRRMKMISPTNREVDIGQTLKPHEYIGMTRREILDGYLRDRAIEKGATAVNALVTNIKTPEETGNGKYLLQYQEYEGGKSVGVAKEMEVDVLIGADGANSRVAKAIGAGEYNYAIAFQERIKINDEQMAFYEELAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKEYQKAIRDRAGAKIAGGKIIKVEAHPIPEHYRPRRVKGRAMLVGDAAGYVTKCSGEGIYFAAKSGRMAGEAVVAAMAGGARLPTEQQIKDLYLKPYDKAYGPTYTVLDLLQKVFYTNNAAREAFVEMCESTYVQDVTFNSYLYKKVQ--GNNPVSDIKLLFTTVGSLFRGNALAPTDKAFSNPVESLKRL 501
BLAST of mRNA_Ecto-sp13_S_contig1283.2335.1 vs. uniprot
Match: F0YII2_AURAN (Geranylgeranyl diphosphate reductase n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YII2_AURAN) HSP 1 Score: 636 bits (1641), Expect = 1.220e-219 Identity = 318/427 (74.47%), Postives = 365/427 (85.48%), Query Frame = 1
Query: 1432 MKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDS-GKYKIHFARYEKGSRKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISDKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVMTSGNNPVEDLKLLFGTFGSLMRGQALAPPDVSFSNPVESLKRL 2709
MKY+VAVVGGGPSG+CAAEI A +++ + ERK DNAKPCGGAIPLCM+DEFDLP IIDRKVRKMKMISP+NREVDIG+TL +DEYIGM RREVMDG++RDRA+E GA IN LV ID PAD DS G+Y IH++R + G RK ++S + D+IIG+DGANSRVAKA+DAG YN+AIAFQERIKI D+KM FY+E+AEMYVGDDVSPDFYGWVFPKYDHVGVGTGTV+NRP IK YQDAIR+RAG+KI GGKIIK+EAHPIPE+YRPRRV R LVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVV+ +K LPTE + Y+K YD LY PTY VLDILQKVFY+NNAAREAFV++C+SEYVQ VTF SYLYK+++T NPVED+KLLFGT GSL+RG+A+A PD FSNPVESLKRL
Sbjct: 1 MKYRVAVVGGGPSGACAAEICAQEPNIETYIIERKFDNAKPCGGAIPLCMVDEFDLPADIIDRKVRKMKMISPSNREVDIGKTLKEDEYIGMCRREVMDGYLRDRAVEYGAIPINALVTKIDTPADSDSQGRYTIHYSRNDLG-RKAPEESLDVDVIIGADGANSRVAKAIDAGEYNFAIAFQERIKIDDEKMAFYDELAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVINRPGIKMYQDAIRERAGDKIAGGKIIKVEAHPIPEHYRPRRVKNRAMLVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVKLMKGGTVLPTEEGITAEYIKPYDGLYGPTYTVLDILQKVFYTNNAAREAFVDMCQSEYVQDVTFQSYLYKRLVTP--NPVEDIKLLFGTVGSLLRGRAIATPDKPFSNPVESLKRL 424 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1283.2335.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1283.2335.1 >prot_Ecto-sp13_S_contig1283.2335.1 ID=prot_Ecto-sp13_S_contig1283.2335.1|Name=mRNA_Ecto-sp13_S_contig1283.2335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=429bp MEMKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLback to top mRNA from alignment at Ecto-sp13_S_contig1283:13206..18017- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1283.2335.1 ID=mRNA_Ecto-sp13_S_contig1283.2335.1|Name=mRNA_Ecto-sp13_S_contig1283.2335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4812bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1283:13206..18017- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1283:13206..18017- >mRNA_Ecto-sp13_S_contig1283.2335.1 ID=mRNA_Ecto-sp13_S_contig1283.2335.1|Name=mRNA_Ecto-sp13_S_contig1283.2335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1287bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1283:13206..18017- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |