prot_Ecto-sp13_S_contig1283.2334.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1283.2334.1
Unique Nameprot_Ecto-sp13_S_contig1283.2334.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length348
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1283.2334.1 vs. uniprot
Match: D7FRX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX6_ECTSI)

HSP 1 Score: 650 bits (1677), Expect = 4.380e-235
Identity = 319/347 (91.93%), Postives = 327/347 (94.24%), Query Frame = 0 
Query:    1 MGRKVIRPQPRAEPRASVGKRRDHSNVWKPNRNPLLEQMKPMPPATFVKGASLVAREATFDPLRGAFVTLARPNDPELNLPEPRRGLGAMGLYKDPGLVKDVMSEAGGRQPFKLPKMHKRRAPPGTRLTNDLGTVMQMNELTANEKAVLWSNYQRAMERSLQKEGDLESVTWRHRATHKPAPPWVHHRWPTKPIARAPPPYGTEDVPESLSPAAVLRSGRRACKGFNQDQGERLLTWKEMKGDRIDPPPQQKLPPSYEADDAHMDAMMDEERSTRLGVPMHKQRRHVPGHVGEILGAIRPIGGRERRELHALEMHEFTVPKKPTPPPAAVTGRTPYRRPSQHQFDRQ 347
            MGRKVIRPQPRAEPRA VGKRRDHSNVWKP+RNPLLEQMKPMPPATFVKGASLVAREATFDPLRGAFV LARPN PE+NLPEPRRGLGA+GLYKDPGLVKDV+S A GRQPFKLPKMHKRR PPGTRLTNDLGTVMQMNELTANEKAVLWSNYQRAMERSLQKEGDLESV+WRHRATH+PAPPWVHHRWPTKPIARAPPPYGTEDVPESLSPAAVLRSGRRACK FNQDQGERLLTWKEMKGDR DPPP +KLPPSYEADDAHMDAMMD+ERS RL VPMHKQRRHV GH GEI GAI PIG RERREL ALEMHEFTVPKKPTPPP  VTGRTPYRRPSQHQ DRQ
Sbjct:    1 MGRKVIRPQPRAEPRAYVGKRRDHSNVWKPSRNPLLEQMKPMPPATFVKGASLVAREATFDPLRGAFVLLARPNAPEVNLPEPRRGLGAIGLYKDPGLVKDVLSAAEGRQPFKLPKMHKRRPPPGTRLTNDLGTVMQMNELTANEKAVLWSNYQRAMERSLQKEGDLESVSWRHRATHEPAPPWVHHRWPTKPIARAPPPYGTEDVPESLSPAAVLRSGRRACKSFNQDQGERLLTWKEMKGDRTDPPPPRKLPPSYEADDAHMDAMMDDERSMRLDVPMHKQRRHVSGHAGEISGAISPIGDRERRELRALEMHEFTVPKKPTPPPPTVTGRTPYRRPSQHQIDRQ 347
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BLAST of mRNA_Ecto-sp13_S_contig1283.2334.1 vs. uniprot
Match: A0A6H5KKV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV0_9PHAE)

HSP 1 Score: 555 bits (1431), Expect = 3.370e-198
Identity = 271/306 (88.56%), Postives = 280/306 (91.50%), Query Frame = 0 
Query:   39 MKPMPPATFVKGASLVAREATFDPLRGAFVTLARPNDPELNLPEPRRGLGAMGLYKDPGLVKDVMSEAGGRQPFKLPKMHKRRAPPGTRLTNDLGTVMQMNELTANEKAVLWSNYQRAMERSLQKEGDLESVTWRHRATHKPAPPWVHHRWPTKPIARAPPPYGTEDVPESLSPAAVLRSGRRACKGFNQDQGERLLTWKEMKGDRIDPPPQQKLPPSYEADDAHMDAMMDEERSTRLGVPMHKQRRHVPGHVGEILGAIRPIGGRERRELHALEMHEFTVPKKPTPPPAAVTGRTPYRRPSQHQF 344
            MKPMPPATFVKGASLVAR+ATFDPLRGAFV LARPNDPELNLPE RRGLGAMGL+KD GLVKDV+SEA GRQPFKLPK+HKRR PPG RLTNDLGTVMQMNELTANEKA LWSNY+RAMER LQKEGDLESVTWRHR TH+PAPPW HHRWPTK IARAPPPYGTEDVPESLSPAAVLRSGRRACK FNQDQGERLLTWKEMKGDR+DPPPQ+KLPPSYEADDAHMDAMMD+ERS RL VPMHKQRRHVPG VGEI GAIRPIG RERREL ALE HEFTVPKKPTPPP A T RTPY RPS H  
Sbjct:    1 MKPMPPATFVKGASLVARQATFDPLRGAFVVLARPNDPELNLPERRRGLGAMGLFKDNGLVKDVLSEAEGRQPFKLPKVHKRRPPPGIRLTNDLGTVMQMNELTANEKAALWSNYERAMERFLQKEGDLESVTWRHRVTHEPAPPWFHHRWPTKQIARAPPPYGTEDVPESLSPAAVLRSGRRACKSFNQDQGERLLTWKEMKGDRVDPPPQRKLPPSYEADDAHMDAMMDDERSMRLAVPMHKQRRHVPGQVGEISGAIRPIGDRERRELRALETHEFTVPKKPTPPPPAATARTPYLRPSHHSI 306
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1283.2334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRX6_ECTSI4.380e-23591.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKV0_9PHAE3.370e-19888.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1283contigEcto-sp13_S_contig1283:8627..11172 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1283.2334.1mRNA_Ecto-sp13_S_contig1283.2334.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1283 7760..12072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1283.2334.1 ID=prot_Ecto-sp13_S_contig1283.2334.1|Name=mRNA_Ecto-sp13_S_contig1283.2334.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=348bp
MGRKVIRPQPRAEPRASVGKRRDHSNVWKPNRNPLLEQMKPMPPATFVKG
ASLVAREATFDPLRGAFVTLARPNDPELNLPEPRRGLGAMGLYKDPGLVK
DVMSEAGGRQPFKLPKMHKRRAPPGTRLTNDLGTVMQMNELTANEKAVLW
SNYQRAMERSLQKEGDLESVTWRHRATHKPAPPWVHHRWPTKPIARAPPP
YGTEDVPESLSPAAVLRSGRRACKGFNQDQGERLLTWKEMKGDRIDPPPQ
QKLPPSYEADDAHMDAMMDEERSTRLGVPMHKQRRHVPGHVGEILGAIRP
IGGRERRELHALEMHEFTVPKKPTPPPAAVTGRTPYRRPSQHQFDRQ*
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