mRNA_Ecto-sp13_S_contig1283.2333.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1283.2333.1 vs. uniprot
Match: D7FRX7_ECTSI (Carbohydrate binding family 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX7_ECTSI) HSP 1 Score: 853 bits (2205), Expect = 2.570e-307 Identity = 404/420 (96.19%), Postives = 408/420 (97.14%), Query Frame = 1
Query: 1 RVGDTVVNVAWTAPGEWISYTVQHPGSETVVQDVSVRYAVLGHWNGIALCLDLEDPSECPKLGEGDEQVIMLNSNLPETRSYSDWNWTKNASVALTPGPHVVTLCFIGNAVVNVDLLRFGESDCSNGVCQWVDGEETCITCPQDCGECPTAYVPLRVPGDLEAEDFDLGGEGVGFHENECVSSETKNCTQVQGMLSEYRNESSKEGLVELRDADGTVSWGWTSIGEWLTYTVTVSITSDYNVTLRYASASTGQAAIFLDSYTCDVKEGKGALLGSLLMPDSKGEAGPFSRTAPFTTRLHAGQHSIRVCVATGGFTLDKISFDLQTIGVCNDDGKCDVGDDEGCMSCEDDCFCSEGPWYGLVKTPIPGFVEAYKFDEGGNGVAYYDDTKGNLGLVGLRTDESVDIEAGRDGSLHVAYGTPG 1260
R+GDTVVNVAWTAPGEWISYTVQHPGSETVVQDVSVRYAVLGHWNGIALCLDLEDPSECPKLGEGDEQVIMLNSNLPETRSYSDWNWTKNASVALTPGPHVVTLCFIGNAVVNVDLLRFGESDCSNGVCQWVD EETCITCPQDCGECPTAYVPLRVPGDLEAEDFD+GGEGVGFHENECVSSETKNCTQVQGMLSEYRNESSKEGLVELRDADGTVSWGWTSIGEWLTYTVTVS+TSDYNVTLRYASASTGQA IFLD+YTCDVKEGKG LGSLLMPDS GEAGPFSRTAPFTTRL AGQHSIRVCVATGGFTLDKISFDLQT GVCNDDGKCDVGDDEGCMSCEDDC CSEG WYG VKT IPGFVEAYKFDEGGNGVAYYDDTKGNLGLVGLRTDESVDIEAG DGSLHVAYGTPG
Sbjct: 241 RIGDTVVNVAWTAPGEWISYTVQHPGSETVVQDVSVRYAVLGHWNGIALCLDLEDPSECPKLGEGDEQVIMLNSNLPETRSYSDWNWTKNASVALTPGPHVVTLCFIGNAVVNVDLLRFGESDCSNGVCQWVDSEETCITCPQDCGECPTAYVPLRVPGDLEAEDFDIGGEGVGFHENECVSSETKNCTQVQGMLSEYRNESSKEGLVELRDADGTVSWGWTSIGEWLTYTVTVSVTSDYNVTLRYASASTGQAVIFLDTYTCDVKEGKGTFLGSLLMPDSGGEAGPFSRTAPFTTRLQAGQHSIRVCVATGGFTLDKISFDLQTSGVCNDDGKCDVGDDEGCMSCEDDCVCSEGQWYGFVKTSIPGFVEAYKFDEGGNGVAYYDDTKGNLGLVGLRTDESVDIEAGWDGSLHVAYGTPG 660
BLAST of mRNA_Ecto-sp13_S_contig1283.2333.1 vs. uniprot
Match: UPI00117DBE3E (carbohydrate-binding protein n=1 Tax=Catenovulum sediminis TaxID=1740262 RepID=UPI00117DBE3E) HSP 1 Score: 137 bits (344), Expect = 8.430e-31 Identity = 102/371 (27.49%), Postives = 156/371 (42.05%), Query Frame = 1
Query: 415 ITCPQDCGECPTAYVPLRVPGDLEAEDFDLGGEGVGFHENECVSSETKNCTQVQGMLSEYRNESSKEGLVELRDADGTVSWGWTSIGEWLTYTVTVSITSDYNVTLRYASASTGQAAIFLDSYTCDVKEGKGALLGSLLMPDSKGEAGPFSRTAPFTTRLHAGQHSIRVCVATGGFTLDKISFDLQTIGVCNDDGKCDVGDDEGCMSCEDDCFCSEGPWYGLVKTPIPGFVEAYKFDEGGNGVAYYDDTKGNLGLVGLRTDESVDIEAGRDGSLHVAYGTPGEWLKYTVYVSDSGLFNVAAKYSTPGNSTALSITLDDGTDDACDNNLKDSLVFYGTNLPSSGGWDVWTKTIPVEIALPAGSHVFKLCIIS 1527
+ C P P+ +PG +EAE FDLGG+G+ +H+ ++RNE + +E+ G + GW GEWL YTV V +Y + + AS G + F +V ++ P + G ++ + + L+AG H +RV +GGF +D ISF L G G Y +PG +EA +D GG G+AY D GN G G +E VDIE G ++ + PGEWL YT+ VS +G ++++A ++ A+ TD + + +GGW WT + + L AG HV +L +S
Sbjct: 23 LLCQNALANTPYGTNPIAIPGTIEAELFDLGGQGIAYHD-----------LGAGNTGGQFRNE---DVDIEIASTGG-YNIGWFEPGEWLEYTVNVETAGNYAIHAKVASGMNGGSLRF------EVYGATNTNSETISFPGT-GSWQNWTSSPSTSLSLNAGTHIVRVVQNSGGFNVDSISFALTNSG---------------------------GTPYHGAPAQVPGVIEAEFYDIGGAGIAYNDLNAGNTG--GQLRNEDVDIELASTGGYNIGWFEPGEWLTYTINVSQAGNYDISAIVASGMGGGAMRFEFTGATD----------VQSADIQISDTGGWQNWTPSPNTSVTLNAGMHVVRLLQLS 332
BLAST of mRNA_Ecto-sp13_S_contig1283.2333.1 vs. uniprot
Match: A0A524MMN3_9BACT (Carbohydrate-binding protein (Fragment) n=1 Tax=Lentisphaerales bacterium TaxID=2448604 RepID=A0A524MMN3_9BACT) HSP 1 Score: 136 bits (343), Expect = 1.400e-30 Identity = 139/508 (27.36%), Postives = 205/508 (40.35%), Query Frame = 1
Query: 25 VAWTAPGEWISYTVQHPGSETVVQDVSVRYAVLGHWNGIALCLDLEDPSECPKLGEGDEQVIMLNSNLPETRSYSDWNWTKNASVALTPGPHVVTLCFIGNAVVNVDLLRFGESDCSNGVCQWVDGEETCITCPQDCGECPTAYVPLRVPGDLEAEDFDLGGEGVGFHENECVSSETKNCTQVQGMLSEYRNESSKEGLVELRDADGTVSWGWTSIGEWLTYTVTVSITSDYNVTLRYASASTGQAAIFLDSYTCDVKEGKGALLGSLLMPDSKGEAGPFSRTAPFTTRLHAGQHSIRVCVATGGFT-----LDKISFDLQTIGVCNDDGKCDVGDDEGCMSCEDDCFCSEGPWYGLVKTPIPGFVEAYKFDEGGNGVAYYDDTKGNLGLVGLRTDESVDI--EAGRDGSLHVAYGTPGEWLKYTVYVSDSGLFNVAAKYSTPGNSTALSITLDDGTDDACDNNLKDSLVFYGTNLPSSGGWDVWTKTIPVEIALPAGSHVFKLCIIS 1527
V WTAPGEW+ YTV P S T V + +G +G A ++++ + L +P T ++ W + + L+ G HV L L S G C ++ E IT + P V VPG +E EDFD+GG+ + + + T YR + + A+ GWT GEWL YT+ V+ +++Y T+R AS G F Y D + GSL +P++ G + + + AGQH +R+ + T G + LD I+ V + P YG V +PG VE FD GG VAY D T GN G R E VDI A + + + GEWL+YT+ V G + + A+ ++ G I LD GT N+ SL +P++G W W +++ AG HV +L + S
Sbjct: 108 VGWTAPGEWMRYTVTVPTSGTFT--VKTIFGAVG--SGGAFHIEVDGTNVTGSLA------------VPNTGGWTTWASVSSPGITLSAGQHVFGL-----------FLNAAGSGGFVGTCDYM---EFSITSFSPGAQTPYGGVAWAVPGSVEIEDFDVGGQAIAYSD-----------TTAGNEGGAYRGAEDVD-IAGHASANNGNCIGWTKAGEWLEYTINVASSTNY--TIRSRVASLGAGGTF--HYQIDGTN----VTGSLTVPNTGGWYN-WQNVSTANVAIAAGQHVLRLAMDTVGASGFVGALDTITLSTVAASV-------------------------QAP-YGGVAWVMPGTVEVENFDTGGQTVAYSDTTGGNEGGA-YRGAEDVDIAGHASANNGNCIGWTKAGEWLEYTINVVTPGSYVLQARVASLGAGGTFHIELD-GT------NVTGSLT-----VPNTGDWFSWQIRSSGNVSIGAGQHVMRLSLDS 525
BLAST of mRNA_Ecto-sp13_S_contig1283.2333.1 vs. uniprot
Match: UPI001FE1E821 (carbohydrate-binding protein n=1 Tax=Sporocytophaga myxococcoides TaxID=153721 RepID=UPI001FE1E821) HSP 1 Score: 134 bits (337), Expect = 2.420e-30 Identity = 112/374 (29.95%), Postives = 178/374 (47.59%), Query Frame = 1
Query: 406 ETCITCPQDCGECPTAYVPLRVPGDLEAEDFDLGGEGVGFHENECVSSETKNCTQVQGMLSEYRNESSKEGLVELRDADGTVSWGWTSIGEWLTYTVTVSITSDYNVTLRYASASTGQAAIFLDSYTCDVKEGKGALLGSLLMPDSKGEAGPFSRTAPFTTRLHAGQHSIRVCV-ATGGFTLDKISFDLQTIGVCNDDGKCDVGDDEGCMSCEDDCFCSEGPWYGLVKTPIPGFVEAYKFDEGGNGVAYYD-DTKGNLGLVGLRTDESVDIEAGRD--GSLHVAYGTPGEWLKYTVYVSDSGLFNVAAKYSTPGNSTALSITLDDGTDDACDNNLKDSLVFYGTNLPSSGGWDVWTKTIPVEIALPAGSHVFKL 1515
E IT + + P + +PG ++ E+FD+GG G + ++ S QV +++ +RN+ + + D G + GWT+ GEWL Y+V V T YN+ LR A G+ S T D + ++ + +P++ G +S +L+AG+ +RV + AT L+ +SF L + P+ G V IPG +EA ++D GG G+AY++ +T GN G LR DE VDIEA +D G+ +VAY GEWL+YTV V+ SG +++ + + G+ L I +D G D V +P++GGW W +I+L G HV ++
Sbjct: 90 EANITIKVNLPQGPFKGITHVIPGIIQLEEFDVGGNGFAYSDDSPGS-------QVTPVIN-FRNDEDVD-IENCTDVGGGYNIGWTTAGEWLEYSVEVQKTGTYNLDLRVACNGDGRKL----SVTMD----EASVATDITIPNTGGWQ-TWSTVTLKDIKLNAGKQIMRVTIGATDYVNLNYVSFSLTK-------------------------ELKQEPFNG-VSHLIPGRIEAEEYDLGGEGLAYHESNTNGNEGKATLRNDE-VDIEATQDIEGTYNVAYILQGEWLEYTVNVAVSGTYDLGLRVAADGSGKILHIEMD-GKD-----------VTGPVTIPNTGGWQSWQTVTLKDISLATGPHVMRI 406
BLAST of mRNA_Ecto-sp13_S_contig1283.2333.1 vs. uniprot
Match: A0A8A3S5C4_9EURY (Carbohydrate-binding protein n=2 Tax=Methanofollis TaxID=81416 RepID=A0A8A3S5C4_9EURY) HSP 1 Score: 132 bits (333), Expect = 5.190e-29 Identity = 107/352 (30.40%), Postives = 166/352 (47.16%), Query Frame = 1
Query: 469 VPGDLEAEDFDLGGEGVGFHENECVSSETKNCTQVQGMLSEYRNESSKEGL-VELRDADGTVSWGWTSIGEWLTYTVTVSITSDYNVTLRYASASTGQAA-IFLDSYTCDVKEGKGALLGSLLMPDSKGEAGPFSRTAPFTTRLHAGQHSIRVCVATGGFTLDKISFDLQTIGVCNDDGKCDVGDDEGCMSCEDDCFCSEGPWYGLVKTPIPGFVEAYKFDEGGNGVAYYDDTKGNLGLVGLRTDESVDIEAGR-DGSLHVAYGTPGEWLKYTVYVSDSGLFNVAAKYSTPGNSTALSITLDDGTDDACDNNLKDSLVFYGTNLPSSGGWDVWTKTIPVEIALPAGSHVFKL 1515
+PG +EAED+D GGEGV +H+ + V+ +G EYR K+G+ +E + G + + GEWL Y+V V+ Y+V ASA GQ+ + +D G + ++ P++ G G F+ T + L AG H+++V G LDKI+F T N D G + G T +PG +EA +DEGG VAY+D N G G + VDIE+ + G +AY PGEWL+YT+ V+++G ++VA ++ N ++ + L D P++G W +T T+ I LPAG H+ ++
Sbjct: 486 LPGTVEAEDYDQGGEGVAYHDTDAVN---------EG--GEYR----KDGVDIEYWEKTGATTIAYAYPGEWLQYSVNVTEAGTYDVDFTVASAMNGQSVKVLID----------GEEIAAVEAPNT-GSWGTFT-TVKKSFDLSAGDHTLKVAF-DGSLNLDKIAFVQNTSSGSNPDNG--SGSEAG--------------------TAVPGTIEAEDYDEGGEDVAYHDTDAVNEG--GDYRQDGVDIESWKTSGVTTIAYAFPGEWLQYTIDVAEAGTYDVAFTVASAMNGQSMKV-------------LVDGKEVETVTSPNTGSWGTFT-TVKKNIDLPAGKHIIRI 771
BLAST of mRNA_Ecto-sp13_S_contig1283.2333.1 vs. uniprot
Match: A0A7K4HP91_9EURY (Carbohydrate-binding protein n=1 Tax=Methanofollis tationis TaxID=81417 RepID=A0A7K4HP91_9EURY) HSP 1 Score: 132 bits (331), Expect = 1.150e-28 Identity = 131/499 (26.25%), Postives = 205/499 (41.08%), Query Frame = 1
Query: 22 NVAWTAPGEWISYTVQHPGSETVVQDVSVRYAVLGHWNGIALCLDLEDPSECPKLGEGDEQVIMLNSNLPETRSYSDWNWTKNASVALTPGPHVVTLCFIGNAVVNVDLLRFGESDCSNGVCQWVDGEETCITCPQDCGECPTAYVPLRVPGDLEAEDFDLGGEGVGFHENECVSSETKNCTQVQGMLSEYRNESSKEGLVELRDADGTVSWGWTSIGEWLTYTVTVSITSDYNVTLRYASASTGQAAIFLDSYTCDVKEGKGALLGSLLMPDSKGEAGPFSRTAPFTTRLHAGQHSIRVCVATGGFTLDKISFDLQTIGVCNDDGKCDVGDDEGCMSCEDDCFCSEGPWYGLVKTPIPGFVEAYKFDEGGNGVAYYDDTKGNLGLVGLRTDESVDIEA-GRDGSLHVAYGTPGEWLKYTVYVSDSGLFNVAAKYSTPGNSTALSITLDDGTDDACDNNLKDSLVFYGTNLPSSGGWDVWTKTIPVEIALPAGSHVFKL 1515
+V WTA GEW+ YTV S T +V + V + G ++ L ++ C +P T S+S + T + + L+ G HV+TL F G+ ++ + F + +PG ++AED++ GGEGVG+H+ T YR++ + +++ ADG S GWT+ GEWL YTV V + Y V+ AS TG S T V +G A ++ S S+T L AG H + + V +G + + F ++ + IPG ++A ++ GG GV Y+D T GN G G+ + VD++ DG V + GEWLKYTV V SG + V+ ++P +++++ +D G D AC F +P++ W +T T+ L AG HV L
Sbjct: 721 SVGWTATGEWLKYTVDVETSGTY----TVSFLVASPYTGNSMTLRVDGVDAC-------------TFAVPATSSWSSYT-TVSRTCTLSAGVHVLTLVFSGDP--DISYMDFVAASTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSIPGRIQAEDYNSGGEGVGYHD-----------TTSGNRGGVYRSD---DVDLQVCSADGGYSVGWTATGEWLKYTVDVETSGTYTVSFLVASPYTGS------SMTLRV-DGVDACTFAVPATSSWSSYTTVSKTCT----LSAGVHVLTL-VFSGDPDISYMDF----------------------VAASSPTXXXXXXXXXXXYSSIPGRIQAEDYNSGGEGVGYHDTTSGNRG--GVYRSDDVDLQVCSADGGYSVGWTATGEWLKYTVDVETSGTYTVSFLVASPYTGSSMTLRVD-GVD-AC--------TFA---VPATSSWSSYT-TVSKTCTLSAGVHVLTL 1135
BLAST of mRNA_Ecto-sp13_S_contig1283.2333.1 vs. uniprot
Match: A0A8J7RK52_9EURY (Uncharacterized protein n=1 Tax=Methanofollis sp. W23 TaxID=2817849 RepID=A0A8J7RK52_9EURY) HSP 1 Score: 129 bits (325), Expect = 5.380e-28 Identity = 108/351 (30.77%), Postives = 166/351 (47.29%), Query Frame = 1
Query: 469 VPGDLEAEDFDLGGEGVGFHENECVSSETKNCTQVQGMLSEYRNESSKEGL-VELRDADGTVSWGWTSIGEWLTYTVTVSITSDYNVTLRYASASTGQAAIFLDSYTCDVKEGKGALLGSLLMPDSKGEAGPFSRTAPFTTRLHAGQHSIRVCVATGGFTLDKISFDLQTIGVCNDDGKCDVGDDEGCMSCEDDCFCSEGPWYGLVKTPIPGFVEAYKFDEGGNGVAYYDDTKGNLGLVGLRTDESVDIEAGRDGSLH-VAYGTPGEWLKYTVYVSDSGLFNVAAKYSTPGNSTALSITLDDGTDDACDNNLKDSLVFYGTNLPSSGGWDVWTKTIPVEIALPAGSHVFKL 1515
+PG +EAED+D GGEGVG+H+ + V+ +G EYR ++G+ +E +G + + GEWL Y+V V+ Y+ ASA GQ+ + L G + ++ P++ G G F+ T T L G H+ +V G LDKI+F T N D D G + +PG +EA +DEGG GVAY+D N G G + VDIE + + +AY PGEWL+YTV V+++G ++VA ++ + A+ + +DD V T+ P++G W +T + + LPAG+HV K+
Sbjct: 486 LPGTVEAEDYDQGGEGVGYHDTDAVN---------EG--GEYR----EDGVDIEYWAKNGATTIAYAYPGEWLQYSVNVTEAGTYDADFTVASAMNGQSMMVLVD---------GEEIAAVEAPNT-GSWGTFT-TMRKTFDLSEGDHTFKVAF-DGSLNLDKIAFARNTTSGSNPD------DGSG------GXXXXXXXXXXXMGAAVPGTIEAEDYDEGGEGVAYHDTDDVNEG--GAYRKDGVDIEYWKASDITTIAYAFPGEWLQYTVDVAEAGTYDVACTVASAMDGQAMKVLVDDEE------------VATMTS-PNTGSWGKFTA-VKKSVELPAGTHVIKV 781
BLAST of mRNA_Ecto-sp13_S_contig1283.2333.1 vs. uniprot
Match: A0A402D4P7_9BACT (Uncharacterized protein n=1 Tax=Capsulimonas corticalis TaxID=2219043 RepID=A0A402D4P7_9BACT) HSP 1 Score: 125 bits (314), Expect = 7.180e-27 Identity = 110/382 (28.80%), Postives = 168/382 (43.98%), Query Frame = 1
Query: 445 PTAYVPLRVPGDLEAEDFDLGGEGVGFHENECVSSETKNCTQVQGMLSEYRNESSKEGLVELRDADGTVSWGWTSIGEWLTYTVTVSITSDYNVTLRYASASTGQAAIFLDSYTCDVKEGKGALLGSLLMPDSKGEAGPFSRTAPFTTRLHAGQHSIRVCV-ATGGFTLDKISFDLQTIGVCNDDGKCDVGDDEGCMSCEDDCFCSEGPWYGLVKTPIPGFVEAYKFDEGGNGVAYYDDTKGNLGLV-GLRTDESVDIEAGRDGSLHVAYGTPGEWLKYTVYV--SDSGLFNVAAKYSTPGNSTALSITLDDGTDDACDNNLKDSLVFYGT-NLPSSGGWDVWTKTIPVEIALPA-----GSHVFKLCIISTTGASDTNLKG 1560
P P+ +PG ++AE++D GGEGV +H+ + +T + T++ EG+ + T GWT GEWL YTV V T Y +SA +F + ++ G+L +P++ E P +P T L GQH +R+ + ATG +FD T+ +E YG +PG ++A +D GG G AY+D T GN+ G R E VD ++ + V + PGEWL YTVYV +DS F+V A S+ GN + ++ D + GT ++P + G +T PV++ P+ G H+ +L I ST +TN G
Sbjct: 31 PYTGAPISLPGVIQAENYDTGGEGVAYHDTTPGNVDTGDGTRIT------------EGVDNWLWQNHTWMVGWTQPGEWLNYTVNVLKTGPYRFHTYASSAGNNAGGVF------SILVDGSSVTGNLQVPNTTIETNPVDIVSP-TVNLTVGQHVVRLYINATGPNPNSCGNFDQITV-------------------------TAESTPYGGTAFGLPGIIQAENYDNGGEGFAYHDTTPGNIDTGDGTRITEGVDNWLWQNHTWMVGWTQPGEWLNYTVYVQATDSYKFHVLA--SSAGNVVGGTFHIE-----------VDGVNATGTLHVPQTTG-----ETFPVDVPSPSVFMTIGQHILRLVIDST--GPNTNSAG 348
BLAST of mRNA_Ecto-sp13_S_contig1283.2333.1 vs. uniprot
Match: UPI001CC6BEB2 (putative Ig domain-containing protein n=1 Tax=Ferruginibacter sp. KIS38-8 TaxID=2875540 RepID=UPI001CC6BEB2) HSP 1 Score: 125 bits (315), Expect = 1.210e-26 Identity = 110/409 (26.89%), Postives = 171/409 (41.81%), Query Frame = 1
Query: 469 VPGDLEAEDFDLGGEGVGFHENECVSSETKNCTQVQGMLSEYRNESSKEGLVELRDADGTVSWGWTSIGEWLTYTVTVSITSDYNVTLRYASASTGQAA-IFLDSYTCDVKEGKGALLGSLLMPDSKGEAGPFSRTAPFTTRLHAGQHSIRVCVATGGFTLDKISFDLQ----------------TIGVC--------------NDDGK---CDVGDDEGCMSCEDDCFCS--------------------------EGPWYGLVKTPIPGFVEAYKFDEGGNGVAYYDDTKGNLGLVGLRTDESVDIEAGRDGSLHVAYGTPGEWLKYTVYVSDSGLFNVAAKYSTPGNSTALSITLDDGTDDACDNNLKDSLVFYGTNLPSSGGWDVWTKTIPVEIALPAGSHVFKL 1515
+PG +EAED+D GGEG+ +H+N+ V+S +YR EG+ ADG + GWT+ GEW+ YTV V+ Y + LR AS ++G+ I LD + G++ +P++ + + + T L GQ ++V T GF ++ +SF L T+G N G V G +S + + P+ G + IPG +EA +D GG G+AY+D+ N G R E VDIE DG +V + GEW++YTV V+ +G + + + ++P + L I LD G N+ S+ +P++ W W AL G V K+
Sbjct: 884 IPGKIEAEDYDTGGEGIAYHDNDAVNSG-----------GQYRP---SEGVDIETCADGGYNVGWTNAGEWMEYTVNVATAGTYTLQLRLASPNSGKTLHIELDGIN---------ISGTIAIPNTT-DWQKWQTVSVTTPALTTGQKILKVVEETDGFNINYLSFTLNSLPPAPVISSAATATATVGAAFSYTITASNTPTSYNATGLPAGLSVNTTTGVISGTPTIATTSNVTISAINAGGTGTKTLIITVSNPPQAPYGGTARA-IPGKIEAEDYDTGGEGIAYHDNDVANSGGQ-YRPSEGVDIETCADGGYNVGWTNAGEWMEYTVNVATAGTYTLQLRLASPNSGKTLHIELD-GV------NISGSIA-----IPNTTDWQKWQTVSVTTPALTTGQKVLKI 1254
BLAST of mRNA_Ecto-sp13_S_contig1283.2333.1 vs. uniprot
Match: A0A7M2X240_9BACT (Carbohydrate-binding protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7M2X240_9BACT) HSP 1 Score: 124 bits (311), Expect = 3.680e-26 Identity = 129/521 (24.76%), Postives = 200/521 (38.39%), Query Frame = 1
Query: 19 VNVAWTAPGEWISYTVQHPGSETVVQDVSVRYAVLGHWNGIALCLDLEDPSECPKLGEGDEQVIMLNSNLPETRSYSDWNWTKNASVALTPGPHVVTLCFIGNAVVNVDLLRFGESDCSNGVCQWVDGEETCITCPQDCGECPTAYVPLRVPGDLEAEDFDLGGEGVGFHENECVSSETKNCTQVQGMLSEYRNESSKEGLVELRDADGTVSWGWTSIGEWLTYTVTVSITSDYNVTLRYASASTGQA-AIFLDSYTCDVKEGKGALLGSLLMPDSKGEAGPFSRTAPFTTRLHAGQHSIRVCVATGGFTLDKISFDLQTIGVCNDDGKCDVGDDEGCMSCEDDCFC--SEGPWYGLVKTPIPGFVEAYKFDEGGNGVAYYDDTKGNLGLVGLRTDESVDIEAGRD--GSLHVAYGTPGEWLKYTVYVSDSGLFNVAAKYSTPGNSTALSITLDDGTDDACDNNLKDSLVFYGTNLPSSGGWDVWTKTIPVEIALPAGSHVFKLCIISTTGASDTNLKGLN 1566
+N+ W GEW++YT S SVR V G L+ + +P+T + + + L G V+ L E++ ++G + +T P + + +PG +EAE+FD GGEG G+ + + V+ + G+ SE D G + G+ + GEWL YT Y + R AS G + +D A+ G+ +PD+ G S + P L AG H +R F + ++G G + D G + ++ P YG +PG +EA FDEGG G+AY+DD N G G VD+E+ D G V Y + GEWL+Y+V + +GL+++ ++++ I +D V LP +GGW WT + LPAG HV +L +T G L LN
Sbjct: 727 LNLGWIKAGEWVNYTT----SVATAGTYSVRARVASQGVGGRFRLEYNGTQ------------VGTTFTIPDTGGWQTYQSVHVTGINLPAGQGVLRLVC--------------ETEGASGFAGNIAA--LAVTSP---------FSAVAIPGRIEAENFDNGGEGGGYSDTDTVNQ--GGAYRTTGVDSETTG-----------DIGGGYNVGYLAAGEWLEYTFNAPSADAYTFSPRLASLGVGGTFQLTIDGI---------AVGGATAVPDTAGWQTYQSVSLP-AINLAAGTHVLR--------------FAVLSVGPSGFAGNLNYIDITGATTVPXXXXXXXTQAP-YGGTPAALPGRIEAENFDEGGEGLAYHDDGTNNAG--GAYRATGVDVESVTDTGGGYGVGYISAGEWLEYSVNFASAGLYDLGIRFASGHGGGTAHIEIDGAQ------------VGGSITLPGTGGWATWTTVTSSGLNLPAGQHVLRLAFDTTAGGDIGVLSWLN 1154 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1283.2333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1283.2333.1 >prot_Ecto-sp13_S_contig1283.2333.1 ID=prot_Ecto-sp13_S_contig1283.2333.1|Name=mRNA_Ecto-sp13_S_contig1283.2333.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=524bp RVGDTVVNVAWTAPGEWISYTVQHPGSETVVQDVSVRYAVLGHWNGIALCback to top mRNA from alignment at Ecto-sp13_S_contig1283:2..5294+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1283.2333.1 ID=mRNA_Ecto-sp13_S_contig1283.2333.1|Name=mRNA_Ecto-sp13_S_contig1283.2333.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5293bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1283:2..5294+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1283:2..5294+ >mRNA_Ecto-sp13_S_contig1283.2333.1 ID=mRNA_Ecto-sp13_S_contig1283.2333.1|Name=mRNA_Ecto-sp13_S_contig1283.2333.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1572bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1283:2..5294+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |